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Lag0036688 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036688
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDEAD-box ATP-dependent RNA helicase 42
Genome locationchr2:403370..404619
RNA-Seq ExpressionLag0036688
SyntenyLag0036688
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058146.1 DEAD-box ATP-dependent RNA helicase 42 [Cucumis melo var. makuwa]1.9e-0438.46Show/hide
Query:  LLPSNSECCRQLFFFHDPRDVLIFGWNAESPQVRRSRHPPYLGEVYGIPER--------ETEEINRVV---GGPWSGLSLLPQWPPRSQKS
        LL  N ECC QLF+F DP DVLI  WN ESP ++   H  +   V     R         T+EI R+V   G P  G    P   P +  S
Subjt:  LLPSNSECCRQLFFFHDPRDVLIFGWNAESPQVRRSRHPPYLGEVYGIPER--------ETEEINRVV---GGPWSGLSLLPQWPPRSQKS
KAG7024080.1 DEAD-box ATP-dependent RNA helicase 42, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0539.84Show/hide
Query:  ECCRQLFFFHDPRDVLIFGWNAESPQVRRSRHPPYLGE-------VYGIPE-RETEEINRVVGGPWSGLSLLPQWPPRSQ--KSSSLSLSLCS---EDVM
        ECCRQL FF D RD LIF W+ ES Q  ++R    +GE       +Y IP   E  EI  +       L      P R++  K       LCS   ED +
Subjt:  ECCRQLFFFHDPRDVLIFGWNAESPQVRRSRHPPYLGE-------VYGIPE-RETEEINRVVGGPWSGLSLLPQWPPRSQ--KSSSLSLSLCS---EDVM

Query:  NPVSFTSFFMEKAYVWNHVILQM
        N + FT  FME+A VWN V+LQ+
Subjt:  NPVSFTSFFMEKAYVWNHVILQM
TrEMBL top hitse value%identityAlignment
A0A5A7UVE6 DEAD-box ATP-dependent RNA helicase 429.4e-0538.46Show/hide
Query:  LLPSNSECCRQLFFFHDPRDVLIFGWNAESPQVRRSRHPPYLGEVYGIPER--------ETEEINRVV---GGPWSGLSLLPQWPPRSQKS
        LL  N ECC QLF+F DP DVLI  WN ESP ++   H  +   V     R         T+EI R+V   G P  G    P   P +  S
Subjt:  LLPSNSECCRQLFFFHDPRDVLIFGWNAESPQVRRSRHPPYLGEVYGIPER--------ETEEINRVV---GGPWSGLSLLPQWPPRSQKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTCCAGCAGCGACTCTACGCAATGCTATTGTTACCGTCTAATTCAGAATGCTGCCGTCAATTGTTTTTCTTCCATGATCCTCGTGATGTTCTGATTTTCGGCTG
GAATGCTGAAAGTCCTCAAGTTAGAAGGTCACGGCATCCGCCATATCTGGGGGAAGTCTATGGCATACCAGAGCGCGAGACTGAAGAGATTAACAGGGTGGTGGGAGGTC
CATGGTCGGGTTTATCACTCCTGCCCCAATGGCCTCCCAGGAGTCAGAAAAGTTCTTCCTTATCCCTGAGCTTATGCAGCGAAGATGTTATGAATCCTGTGAGCTTCACA
TCATTCTTCATGGAGAAAGCTTACGTCTGGAATCATGTTATTCTTCAAATGGTTGCCCAAGATTTTGCTCACTTTTTCGACAGAGATATTTGGATTTGGGATTGTATGAT
GTTGTCCGCTGGTTGTCCAAGTGAGAGAGATGTCTCAGCCATCATTTTATTAATGAAGTTGATAGTCCAAGTCATTGATGATGTTAGTGCCTACATAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTCCAGCAGCGACTCTACGCAATGCTATTGTTACCGTCTAATTCAGAATGCTGCCGTCAATTGTTTTTCTTCCATGATCCTCGTGATGTTCTGATTTTCGGCTG
GAATGCTGAAAGTCCTCAAGTTAGAAGGTCACGGCATCCGCCATATCTGGGGGAAGTCTATGGCATACCAGAGCGCGAGACTGAAGAGATTAACAGGGTGGTGGGAGGTC
CATGGTCGGGTTTATCACTCCTGCCCCAATGGCCTCCCAGGAGTCAGAAAAGTTCTTCCTTATCCCTGAGCTTATGCAGCGAAGATGTTATGAATCCTGTGAGCTTCACA
TCATTCTTCATGGAGAAAGCTTACGTCTGGAATCATGTTATTCTTCAAATGGTTGCCCAAGATTTTGCTCACTTTTTCGACAGAGATATTTGGATTTGGGATTGTATGAT
GTTGTCCGCTGGTTGTCCAAGTGAGAGAGATGTCTCAGCCATCATTTTATTAATGAAGTTGATAGTCCAAGTCATTGATGATGTTAGTGCCTACATAGTGTGA
Protein sequenceShow/hide protein sequence
MLLQQRLYAMLLLPSNSECCRQLFFFHDPRDVLIFGWNAESPQVRRSRHPPYLGEVYGIPERETEEINRVVGGPWSGLSLLPQWPPRSQKSSSLSLSLCSEDVMNPVSFT
SFFMEKAYVWNHVILQMVAQDFAHFFDRDIWIWDCMMLSAGCPSERDVSAIILLMKLIVQVIDDVSAYIV