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Lag0036725 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036725
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr2:639256..639636
RNA-Seq ExpressionLag0036725
SyntenyLag0036725
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.5e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.5e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.5e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.5e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.5e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein2.7e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein2.7e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein2.7e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein2.7e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein2.7e-0663.41Show/hide
Query:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
        PKK KFF+W L H CINTAD +Q+R P   LSPN C MCN+
Subjt:  PKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTATGGTTTTGGCAACATGGGGATAACGGCATCTTCACCACAGGATCCCTTACTAAAAGCTTGGCCTCTCTATCTCTACCGAATTGCAGGGATTTTTACAGCTTC
TATGGAAAGTCCTATGCCTAAAAAAGTCAAATTTTTCATGTGGGAGCTTAGTCATTCTTGTATTAACACAGCAGACCTAATTCAGAGAAGAAATCCAGCAATTTATCTCT
CCCCCAACTGTTGTATTATGTGCAACGAGCTAGCGAATCCCAGATTCATTTATTCAGCAGCTGCACCTTTGCATCAGCTTTCTGAGATCATATTCAAAGTGCATTTGGAT
GGCTTTTTGTTCAACCGGGTGATATCCTATCCCTTCTCCATCTTTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTATGGTTTTGGCAACATGGGGATAACGGCATCTTCACCACAGGATCCCTTACTAAAAGCTTGGCCTCTCTATCTCTACCGAATTGCAGGGATTTTTACAGCTTC
TATGGAAAGTCCTATGCCTAAAAAAGTCAAATTTTTCATGTGGGAGCTTAGTCATTCTTGTATTAACACAGCAGACCTAATTCAGAGAAGAAATCCAGCAATTTATCTCT
CCCCCAACTGTTGTATTATGTGCAACGAGCTAGCGAATCCCAGATTCATTTATTCAGCAGCTGCACCTTTGCATCAGCTTTCTGAGATCATATTCAAAGTGCATTTGGAT
GGCTTTTTGTTCAACCGGGTGATATCCTATCCCTTCTCCATCTTTCCCTGA
Protein sequenceShow/hide protein sequence
MIYGFGNMGITASSPQDPLLKAWPLYLYRIAGIFTASMESPMPKKVKFFMWELSHSCINTADLIQRRNPAIYLSPNCCIMCNELANPRFIYSAAAPLHQLSEIIFKVHLD
GFLFNRVISYPFSIFP