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Lag0036757 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036757
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:915986..916393
RNA-Seq ExpressionLag0036757
SyntenyLag0036757
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023880084.1 uncharacterized protein LOC111992454 [Quercus suber]9.8e-0936.52Show/hide
Query:  PFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLE
        PFV D +  E +A R++L  A++ G+L L +E D+A V+  + S   D S +G ++++I  L  GL   S    +RSAN+  H +AR+A     E VW+E
Subjt:  PFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLE

Query:  DLPLGLQWSSGKDSL
        D P   + +   DSL
Subjt:  DLPLGLQWSSGKDSL

XP_023881690.1 uncharacterized protein LOC111994061 [Quercus suber]1.3e-0837.86Show/hide
Query:  PFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLE
        P V + +  EA+A R+++  AM+AG + L +E D+A V+  + S   D S +G +  +I+ LA    +C+FG  +RSAN+  H++AR+A     E VWLE
Subjt:  PFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLE

Query:  DLP
        + P
Subjt:  DLP

XP_023905314.1 uncharacterized protein LOC112017083 [Quercus suber]1.3e-0837.86Show/hide
Query:  PFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLE
        P V + +  EA+A R+++  AM+AG + L +E D+A V+  + S   D S +G +  +I+ LA G  +C+FG  +RSAN   H++AR+A     E VWL+
Subjt:  PFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLE

Query:  DLP
        + P
Subjt:  DLP

XP_023920513.1 uncharacterized protein LOC112032047 [Quercus suber]7.5e-0935.65Show/hide
Query:  PFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLE
        PFV D +  E +A R++L  A++ G+  L +E D+  V+  + S   D S +G ++++I  L  GL  CS    +RSAN+  H +AR+A     E VW+E
Subjt:  PFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLE

Query:  DLPLGLQWSSGKDSL
        D P   + +   DSL
Subjt:  DLPLGLQWSSGKDSL

XP_030924586.1 uncharacterized protein LOC115951544 [Quercus lobata]2.6e-0938.74Show/hide
Query:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ
        M TM    P V D    E +A R++L  A++AG   L +E D+  V+ L+ +  ED S +G ++++IK LA+GL   SF + +R ANS  H++AR+A   
Subjt:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ

Query:  KVEGVWLEDLP
          +  WLED P
Subjt:  KVEGVWLEDLP

TrEMBL top hitse value%identityAlignment
A0A2N9FJ03 Reverse transcriptase domain-containing protein1.8e-0833.33Show/hide
Query:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ
        M ++++ +     V+ +EA A + ++    E G+   E E DS  +VA L +    ++  G L+ + K+LA GL +CSF   +R  N   HA+AR AL  
Subjt:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ

Query:  KVEGVWLEDLP
            VW+ED+P
Subjt:  KVEGVWLEDLP

A0A2N9HRK6 Uncharacterized protein2.3e-0834.23Show/hide
Query:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ
        M ++++ + +   V+++EA A R ++    E GL   E E DS  VVA L S   +++  G L++++KLL  GL +  F   +R  N+  HA+AR A+  
Subjt:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ

Query:  KVEGVWLEDLP
            VW+ED+P
Subjt:  KVEGVWLEDLP

A0A2N9J7Z2 Reverse transcriptase domain-containing protein8.1e-0933.33Show/hide
Query:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ
        M ++++ +     V+ +EA A ++++    E G+  +E E DS  +VA L +    ++  G L+ + K+LA GL +CSF   +R  N   HA+AR AL  
Subjt:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ

Query:  KVEGVWLEDLP
            VW+ED+P
Subjt:  KVEGVWLEDLP

A0A5B7BU49 RNase H domain-containing protein (Fragment)1.2e-0941.84Show/hide
Query:  VDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLEDLP
        +D  EA+AI   L+ A + GL  L VE D   V+  + S +ED+SE+G +   IK    G  +C FG  RR+ANS  H +A +A     E  WLEDLP
Subjt:  VDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLEDLP

A0A6A2WB54 RNase H domain-containing protein2.3e-0833.88Show/hide
Query:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ
        +++  K+   VH     EA A+ + L  A E GL ++  ESDS  ++  L S+  D SE+G + ++I+ LAR    CSF +C RS N A  A+A   L +
Subjt:  MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQ

Query:  KVEGVWLEDLPLGLQWSSGKD
          +  W+ED P+ ++  +  D
Subjt:  KVEGVWLEDLPLGLQWSSGKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACTATGATGAAATTGATCCCGTTTGTGCACGATGTTGACACTTTGGAGGCAATGGCGATCCGTGAATCCTTGGTGGTAGCAATGGAAGCCGGATTATTGGCACT
GGAAGTGGAATCGGACTCGGCTCGAGTCGTCGCGTTGCTCAGATCGGAGATGGAGGATGTCTCGGAAGTCGGCGAGTTGGTGAAGGAGATCAAGCTCCTGGCGAGAGGAC
TGCCCGCATGTTCATTTGGCTGGTGCCGGAGGAGCGCCAATTCGGCGGAGCATGCGGTGGCGAGATGGGCTCTCGAGCAGAAGGTTGAAGGAGTGTGGCTGGAAGATTTG
CCGTTAGGGCTTCAGTGGTCTTCGGGCAAAGATAGTTTGGACAATCTTTCTTTTCTGTCCAAAGGTATAGCTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTACTATGATGAAATTGATCCCGTTTGTGCACGATGTTGACACTTTGGAGGCAATGGCGATCCGTGAATCCTTGGTGGTAGCAATGGAAGCCGGATTATTGGCACT
GGAAGTGGAATCGGACTCGGCTCGAGTCGTCGCGTTGCTCAGATCGGAGATGGAGGATGTCTCGGAAGTCGGCGAGTTGGTGAAGGAGATCAAGCTCCTGGCGAGAGGAC
TGCCCGCATGTTCATTTGGCTGGTGCCGGAGGAGCGCCAATTCGGCGGAGCATGCGGTGGCGAGATGGGCTCTCGAGCAGAAGGTTGAAGGAGTGTGGCTGGAAGATTTG
CCGTTAGGGCTTCAGTGGTCTTCGGGCAAAGATAGTTTGGACAATCTTTCTTTTCTGTCCAAAGGTATAGCTGTTTAG
Protein sequenceShow/hide protein sequence
MLTMMKLIPFVHDVDTLEAMAIRESLVVAMEAGLLALEVESDSARVVALLRSEMEDVSEVGELVKEIKLLARGLPACSFGWCRRSANSAEHAVARWALEQKVEGVWLEDL
PLGLQWSSGKDSLDNLSFLSKGIAV