CuGenDBv2

Gene ID	Lag0036791
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein SPA, chloroplastic
Genome location	chr2:1142006..1142727
RNA-Seq Expression	Lag0036791
Synteny	Lag0036791
Gene Ontology terms	GO:0010206 - photosystem II repair (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003756 - protein disulfide isomerase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7024161.1 Protein SPA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-49

88.24

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MTVAPSLSRLHSPFLYCPLKPTSSASLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGARK
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

Query:  LISLLQSSHSFHETSLGSR
        LI   +S  SFHE  LG R
Subjt:  LISLLQSSHSFHETSLGSR

XP_008466492.1 PREDICTED: protein SPA, chloroplastic [Cucumis melo]

3.0e-44

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MTVAPSLSRLHSPFLYCPLKPTSS SLSVTFS NQRSP SYPRIRA+DLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA++
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

XP_022142253.1 protein SPA, chloroplastic [Momordica charantia]

3.9e-44

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MT APSLSRLHSPFLY PLKPTS+ASLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA+K
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

XP_022936404.1 protein SPA, chloroplastic [Cucurbita moschata]

1.3e-44

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MTVAPSLSRLHSPFLYCPLKPTSSASLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGA++
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

XP_038899789.1 protein SPA, chloroplastic [Benincasa hispida]

6.0e-45

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MTVAPS+SRLHSPFLYCPLKPTSS SLSVTFSRNQRSPA+YPRIRA+DLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA++
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ55 Uncharacterized protein

7.2e-44

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MTVAPSLSRLHSPFLYCPLKPT S SLSVTFS NQRSP SYPRIRA+DLDQNTVVALSVGLVSVA+GIGIPVFYETQIDNAAKRENTQPCFPCSGSGA++
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

A0A1S3CRE4 protein SPA, chloroplastic

1.4e-44

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MTVAPSLSRLHSPFLYCPLKPTSS SLSVTFS NQRSP SYPRIRA+DLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA++
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

A0A6J1CMU6 protein SPA, chloroplastic

1.9e-44

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MT APSLSRLHSPFLY PLKPTS+ASLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA+K
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

A0A6J1F877 protein SPA, chloroplastic

6.5e-45

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MTVAPSLSRLHSPFLYCPLKPTSSASLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGA++
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

A0A6J1IFD3 protein SPA, chloroplastic

6.5e-45

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Query:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        MTVAPSLSRLHSPFLYCPLKPTSSASLS+TFSRNQRSPASYPRIRA+DLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGA++
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

SwissProt top hits

e value

%identity

Alignment

K4BVL1 Protein SPA, chloroplastic

1.7e-29

65.69

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Query:  MTVAPSLSRLHSPFLYCPLK-PT-SSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA
        M  APSLSR  SPF+  PLK PT SS+  +  F +  R   SYP I+A+DLDQNTV+A++VG++SVA+G+GIPVFYETQIDNAAKRENTQPCFPC+G+GA
Subjt:  MTVAPSLSRLHSPFLYCPLK-PT-SSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA

Query:  RK
        +K
Subjt:  RK

Q8GSJ6 Protein disulfide-isomerase LQY1, chloroplastic

4.8e-29

69.39

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Query:  APSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPA-SYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        APS  RLHSPF++CP+  T S+      +RN RSP+ SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GA+K
Subjt:  APSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPA-SYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

Arabidopsis top hits

e value

%identity

Alignment

AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

3.4e-30

69.39

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Query:  APSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPA-SYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK
        APS  RLHSPF++CP+  T S+      +RN RSP+ SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GA+K
Subjt:  APSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPA-SYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARK

Sequences

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CDS sequence

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ATGACAGTAGCACCTTCACTTTCTCGCCTTCACTCTCCATTTCTGTATTGTCCTCTCAAACCCACTTCATCTGCCTCTCTATCTGTCACATTTTCCAGAAATCAAAGATC
GCCAGCATCATATCCACGCATCAGAGCTCTAGATCTTGACCAAAACACGGTGGTGGCACTTTCAGTGGGGCTAGTGAGTGTTGCAGTTGGAATAGGCATTCCCGTCTTCT
ACGAGACCCAAATTGATAATGCTGCGAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGCAGTGGTTCGGGAGCACGTAAGTTAATTTCACTGCTTCAGAGTTCACATTCC
TTCCATGAAACGAGTTTAGGGAGTAGGTTTCTAGCATTCTATATCATAGCCCAGGGAATTCTCCTGCCTGTCTCCTCCCTGCTCTTGTCGTTCTCCTATTGTATATCCTT
CGGTCCTGCATACAAAATTAGTTTTCATACAACTTACAAGCTACCAACTAGATAA

mRNA sequence

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Protein sequence

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MTVAPSLSRLHSPFLYCPLKPTSSASLSVTFSRNQRSPASYPRIRALDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGARKLISLLQSSHS
FHETSLGSRFLAFYIIAQGILLPVSSLLLSFSYCISFGPAYKISFHTTYKLPTR

Lag0036791 (gene) of Sponge gourd (AG-4) v1 genome