CuGenDBv2

Gene ID	Lag0036802
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Unknown protein
Genome location	chr2:1246362..1248032
RNA-Seq Expression	Lag0036802
Synteny	Lag0036802
Gene Ontology terms	GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
InterPro domains	IPR019716 - Ribosomal protein L53, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591283.1 hypothetical protein SDJN03_13629, partial [Cucurbita argyrosperma subsp. sororia]

3.9e-60

97.64

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTP QTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
        TWPVIIP+EELNQPAPSIKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

XP_022139291.1 uncharacterized protein LOC111010210 [Momordica charantia]

6.1e-61

96.06

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
        TWP++IPEEEL QP PSIKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

XP_022940323.1 uncharacterized protein LOC111445972 [Cucurbita moschata]

2.6e-59

94.49

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKV+IEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQI VTFVNGVEEVFDATSTPAQTIR MILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
        TWPVIIP+EELN P PSIKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

XP_022974805.1 uncharacterized protein LOC111473560 isoform X1 [Cucurbita maxima]

6.1e-61

96.85

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
        TWPVIIP+EELNQPAPSIKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

XP_022982466.1 uncharacterized protein LOC111481279 [Cucurbita maxima]

2.0e-59

95.28

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIR  ILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
        TWPVIIP+EELN P PSIKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGG5 Uncharacterized protein

4.4e-57

92.13

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLA CMEFLAQCNA KAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIR+MILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
         WPVIIP+EEL QP   IKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

A0A6J1CC86 uncharacterized protein LOC111010210

2.9e-61

96.06

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
        TWP++IPEEEL QP PSIKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

A0A6J1FNY6 uncharacterized protein LOC111445972

1.2e-59

94.49

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKV+IEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQI VTFVNGVEEVFDATSTPAQTIR MILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
        TWPVIIP+EELN P PSIKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

A0A6J1IEW0 uncharacterized protein LOC111473560 isoform X1

2.9e-61

96.85

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRL SCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQI VTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
        TWPVIIP+EELNQPAPSIKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

A0A6J1IZE5 uncharacterized protein LOC111481279

9.5e-60

95.28

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDD PPQIAVTFVNGVEEVFDATSTPAQTIR  ILEKGQLLETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
        TWPVIIP+EELN P PSIKPRKAEDKQ
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G39600.1 CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

2.0e-54

81.1

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Query:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE
        MLKFLSKV+IEFN LDPRLASC+EFLAQCNARKAKESNP CQ++VKRRTD+ PPQI VTFVNGVEE FDA +T AQ+IR MIL+KGQ LETEQMFREAGE
Subjt:  MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGE

Query:  TWPVIIPEEELNQPAPSIKPRKAEDKQ
         WPVIIP+EEL Q AP +KPRKAEDK+
Subjt:  TWPVIIPEEELNQPAPSIKPRKAEDKQ

Sequences

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CDS sequence

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ATGTTGAAGTTCCTCTCTAAAGTGAAGATCGAATTCAATGCTCTCGATCCACGCTTAGCTTCTTGCATGGAATTCTTGGCGCAGTGTAATGCTCGCAAGGCCAAGGAATC
CAACCCCGCTTGTCAGTTGATCGTCAAGCGCCGAACCGACGACTGCCCGCCCCAGATCGCCGTCACCTTCGTCAATGGAGTCGAAGAGGTTTTCGACGCTACCTCTACTC
CCGCTCAAACAATTAGGAATATGATTCTTGAAAAGGGCCAACTCCTTGAGACCGAGCAAATGTTCCGGGAAGCTGGAGAAACTTGGCCGGTCATCATCCCTGAGGAGGAG
CTTAATCAACCTGCCCCCAGTATCAAGCCTAGAAAAGCGGAAGACAAACAGTAA

mRNA sequence

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Protein sequence

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MLKFLSKVKIEFNALDPRLASCMEFLAQCNARKAKESNPACQLIVKRRTDDCPPQIAVTFVNGVEEVFDATSTPAQTIRNMILEKGQLLETEQMFREAGETWPVIIPEEE
LNQPAPSIKPRKAEDKQ

Lag0036802 (gene) of Sponge gourd (AG-4) v1 genome