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Lag0036836 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036836
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationchr2:1509467..1510295
RNA-Seq ExpressionLag0036836
SyntenyLag0036836
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466545.1 PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo]7.4e-6383.33Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPFE+ EEK+ E  G NLQRS+S+PPFNTRKG L+   +ETNL+KP+KN 
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG

Query:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPP  EGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
XP_022940046.1 uncharacterized protein LOC111445795 [Cucurbita moschata]2.7e-6590.41Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK
        MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPF+S EE K  EFGG NLQRSSS+PPFNTRKGFLDME +E +LD KPKK
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK

Query:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
XP_022982140.1 uncharacterized protein LOC111481065 [Cucurbita maxima]1.3e-6489.73Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK
        MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPF+S EE K  EFGG NLQRSSS+PPFNTRKG LDME +E +LD KPKK
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK

Query:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
XP_023525160.1 uncharacterized protein LOC111788844 [Cucurbita pepo subsp. pepo]7.9e-6589.73Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK
        MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPF+S EE K  EFGG NLQRSSS+PPFNTRKGFLDME +E  LD KPKK
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK

Query:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVAN++ASRLGRGGV A
Subjt:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
XP_038898962.1 uncharacterized protein LOC120086405 [Benincasa hispida]1.6e-6286.11Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG
        MGSLMAGWDSPA+DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPFE+SEEKK+E  GGNLQRS+SLPPF T KG L+ME +E NL+KPKKN 
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG

Query:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPP  EGSGNSYVSQFHVANMAASRLG GGVSA
Subjt:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
TrEMBL top hitse value%identityAlignment
A0A0A0LDC2 Uncharacterized protein8.8e-6281.94Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPFE+ EEK+    G NLQRS+S+PPFNTRKG  +   +ETNL+KP+KN 
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG

Query:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPP  EGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
A0A1S3CST6 uncharacterized protein LOC1035039303.6e-6383.33Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPFE+ EEK+ E  G NLQRS+S+PPFNTRKG L+   +ETNL+KP+KN 
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG

Query:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPP  EGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
A0A5D3D820 Putative DNA polymerase epsilon catalytic subunit A3.6e-6383.33Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPFE+ EEK+ E  G NLQRS+S+PPFNTRKG L+   +ETNL+KP+KN 
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG

Query:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPP  EGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
A0A6J1FHE8 uncharacterized protein LOC1114457951.3e-6590.41Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK
        MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPF+S EE K  EFGG NLQRSSS+PPFNTRKGFLDME +E +LD KPKK
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK

Query:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
A0A6J1J1T2 uncharacterized protein LOC1114810656.5e-6589.73Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK
        MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPF+S EE K  EFGG NLQRSSS+PPFNTRKG LDME +E +LD KPKK
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGG-NLQRSSSLPPFNTRKGFLDMEPAETNLD-KPKK

Query:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
        NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NGWWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein3.7e-2042.11Show/hide
Query:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG
        MGSLM+GWDS   DP+ V  RR KSLT+EEI+ FWKTKK              ++ EE+ V+ F   + +  +      +K   D+       ++ K +G
Subjt:  MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNG

Query:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMA
        WWR++ WAFLNEP   EG  N+YVSQF VA++A
Subjt:  WWRRSNWAFLNEPPVIEGSGNSYVSQFHVANMA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTAATGGCGGGTTGGGATTCTCCGGCGAGTGACCCCGAAGAAGTGAGTCATCGGAGGAACAAATCATTGACAAAGGAAGAGATTGAAGCCTTCTGGAAAAC
GAAGAAGCAGTTGCATGAAGAACATCTAAGAGCTATTTTGAGTCCATTTGAGAGCTCTGAGGAAAAGAAGGTGGAGGAGTTTGGTGGAAATCTTCAGAGATCAAGCTCTC
TTCCTCCATTTAATACAAGAAAGGGTTTCTTGGACATGGAACCAGCTGAAACTAACTTAGACAAGCCCAAGAAAAATGGCTGGTGGAGAAGAAGCAACTGGGCGTTTCTA
AACGAACCGCCTGTGATCGAAGGATCTGGTAACAGCTATGTGTCGCAGTTCCACGTGGCCAATATGGCGGCTTCCAGACTTGGTCGTGGTGGAGTCAGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTTTAATGGCGGGTTGGGATTCTCCGGCGAGTGACCCCGAAGAAGTGAGTCATCGGAGGAACAAATCATTGACAAAGGAAGAGATTGAAGCCTTCTGGAAAAC
GAAGAAGCAGTTGCATGAAGAACATCTAAGAGCTATTTTGAGTCCATTTGAGAGCTCTGAGGAAAAGAAGGTGGAGGAGTTTGGTGGAAATCTTCAGAGATCAAGCTCTC
TTCCTCCATTTAATACAAGAAAGGGTTTCTTGGACATGGAACCAGCTGAAACTAACTTAGACAAGCCCAAGAAAAATGGCTGGTGGAGAAGAAGCAACTGGGCGTTTCTA
AACGAACCGCCTGTGATCGAAGGATCTGGTAACAGCTATGTGTCGCAGTTCCACGTGGCCAATATGGCGGCTTCCAGACTTGGTCGTGGTGGAGTCAGTGCTTGA
Protein sequenceShow/hide protein sequence
MGSLMAGWDSPASDPEEVSHRRNKSLTKEEIEAFWKTKKQLHEEHLRAILSPFESSEEKKVEEFGGNLQRSSSLPPFNTRKGFLDMEPAETNLDKPKKNGWWRRSNWAFL
NEPPVIEGSGNSYVSQFHVANMAASRLGRGGVSA