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Lag0036848 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036848
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein RADIALIS-like 3
Genome locationchr2:1604747..1605664
RNA-Seq ExpressionLag0036848
SyntenyLag0036848
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147867.1 protein RADIALIS-like 3 [Cucumis sativus]5.2e-4189.36Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH
        MGS SNWTAKQNKVFENALAIYDKDTPERW NLARAVGGKTAEEVKRHYE+LVEDVNKIETGQVPFPNYR+S PAARGF F+D+EQRMRSL+L+
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH

XP_008465612.1 PREDICTED: protein RADIALIS-like 3 [Cucumis melo]1.8e-4194.25Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQR
        MGS SNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYE+LVEDVNKIETGQVPFPNYR+SGPAARGFCF+D+EQR
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQR

XP_022138113.1 protein RADIALIS-like 3 [Momordica charantia]5.2e-4187.37Show/hide
Query:  MGS-ASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH
        MGS  SNWTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYE+LV+DVNKIETGQVPFPNYRKS    RGFCF+DEE+RMRSLRLH
Subjt:  MGS-ASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH

XP_022941099.1 protein RADIALIS-like 3 [Cucurbita moschata]2.0e-3784.04Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH
        M S S WTAKQNK+FENALAIYD+DTPERW+NLARAVGGKTAEEVKRHYE LVEDVNKIE+GQVPFP Y KS PA  GF FVDEEQRMRSL+LH
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH

XP_038905673.1 protein RADIALIS-like 3 [Benincasa hispida]3.5e-4594.68Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH
        MGS S+WTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYE+LVEDVNKIETGQVPFPNYR+SGPA RGFCFVDEEQRMRSLRLH
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH

TrEMBL top hitse value%identityAlignment
A0A0A0LGK8 SANT domain-containing protein2.5e-4189.36Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH
        MGS SNWTAKQNKVFENALAIYDKDTPERW NLARAVGGKTAEEVKRHYE+LVEDVNKIETGQVPFPNYR+S PAARGF F+D+EQRMRSL+L+
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH

A0A1S3CPA0 protein RADIALIS-like 38.6e-4294.25Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQR
        MGS SNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYE+LVEDVNKIETGQVPFPNYR+SGPAARGFCF+D+EQR
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQR

A0A5D3D7Z0 Protein RADIALIS-like 38.6e-4294.25Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQR
        MGS SNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYE+LVEDVNKIETGQVPFPNYR+SGPAARGFCF+D+EQR
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQR

A0A6J1CC55 protein RADIALIS-like 32.5e-4187.37Show/hide
Query:  MGS-ASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH
        MGS  SNWTAKQNKVFENALA+YDKDTP+RWHNLARAVGGKTAEEVKRHYE+LV+DVNKIETGQVPFPNYRKS    RGFCF+DEE+RMRSLRLH
Subjt:  MGS-ASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH

A0A6J1FM85 protein RADIALIS-like 39.8e-3884.04Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH
        M S S WTAKQNK+FENALAIYD+DTPERW+NLARAVGGKTAEEVKRHYE LVEDVNKIE+GQVPFP Y KS PA  GF FVDEEQRMRSL+LH
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH

SwissProt top hitse value%identityAlignment
F4JVB8 Protein RADIALIS-like 11.8e-2864.84Show/hide
Query:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL
        S+ +WTAKQNK FE ALA YD+DTP RW N+A+ VGGKT EEVKRHYE LV+D+N IE G VPFPNYR SG    G     EE+RMR++RL
Subjt:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL

Q1A173 Protein RADIALIS-like 62.0e-2458.24Show/hide
Query:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL
        S S WT  QNK+FE ALA+YDKDTP+RWHN+A+AVGGKT EEVKRHY+ LVED+  IETG+VP PNY+     +R     D  ++M++L++
Subjt:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL

Q58FS3 Transcription factor RADIALIS1.2e-2457.61Show/hide
Query:  GSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL
        GS   W+AK+NK FE ALA+YDKDTP+RW N+ARAV G+T EEVK+HYE LVED+  IE+G+VPFPNYR +G   +      +E+R R+L++
Subjt:  GSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL

Q6NNN0 Protein RADIALIS-like 34.1e-2567.12Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSG
        M S+++WT K+NK+FE ALA YD+DTP+RWHN+ARAVGGK+AEEV+RHYE L+ DVN IE+G+ P PNYR +G
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSG

Q9SIJ5 Protein RADIALIS-like 21.4e-2557.78Show/hide
Query:  ASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL
        + +WT KQNK FE ALA+YD+DTP+RWHN+ARAVGGKT EE KR Y+ LV D+  IE G VPFP+Y+ +   +      DEE+RMRS++L
Subjt:  ASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL

Arabidopsis top hitse value%identityAlignment
AT1G19510.1 RAD-like 52.3e-2353.19Show/hide
Query:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQR-MRSLRL
        M S+S+WT+KQNK+FE ALA+YDKDTP+RW N+A+AVG K+AEEVKRHY+ LVED+  IE   VP P Y+     ++     D + R M+++R+
Subjt:  MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQR-MRSLRL

AT1G75250.1 RAD-like 65.5e-2572.06Show/hide
Query:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYR
        S S WT  QNK+FE ALA+YDKDTP+RWHN+A+AVGGKT EEVKRHY+ LVED+  IETG+VP PNY+
Subjt:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYR

AT1G75250.2 RAD-like 61.5e-2558.24Show/hide
Query:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL
        S S WT  QNK+FE ALA+YDKDTP+RWHN+A+AVGGKT EEVKRHY+ LVED+  IETG+VP PNY+     +R     D  ++M++L++
Subjt:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL

AT2G21650.1 Homeodomain-like superfamily protein1.0e-2657.78Show/hide
Query:  ASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL
        + +WT KQNK FE ALA+YD+DTP+RWHN+ARAVGGKT EE KR Y+ LV D+  IE G VPFP+Y+ +   +      DEE+RMRS++L
Subjt:  ASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL

AT4G39250.1 RAD-like 11.3e-2964.84Show/hide
Query:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL
        S+ +WTAKQNK FE ALA YD+DTP RW N+A+ VGGKT EEVKRHYE LV+D+N IE G VPFPNYR SG    G     EE+RMR++RL
Subjt:  SASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCTGCATCCAATTGGACGGCCAAGCAGAACAAAGTGTTCGAAAATGCTTTAGCGATCTACGACAAAGACACGCCGGAGCGGTGGCACAACCTCGCCAGAGCCGT
CGGCGGCAAGACGGCGGAGGAAGTCAAGCGGCACTACGAAAAGCTCGTTGAAGATGTCAACAAGATCGAAACCGGCCAAGTTCCTTTCCCCAATTACAGAAAATCCGGAC
CCGCAGCCAGAGGATTTTGCTTTGTTGACGAAGAACAACGGATGAGGAGTCTACGGTTGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCTGCATCCAATTGGACGGCCAAGCAGAACAAAGTGTTCGAAAATGCTTTAGCGATCTACGACAAAGACACGCCGGAGCGGTGGCACAACCTCGCCAGAGCCGT
CGGCGGCAAGACGGCGGAGGAAGTCAAGCGGCACTACGAAAAGCTCGTTGAAGATGTCAACAAGATCGAAACCGGCCAAGTTCCTTTCCCCAATTACAGAAAATCCGGAC
CCGCAGCCAGAGGATTTTGCTTTGTTGACGAAGAACAACGGATGAGGAGTCTACGGTTGCACTGA
Protein sequenceShow/hide protein sequence
MGSASNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTAEEVKRHYEKLVEDVNKIETGQVPFPNYRKSGPAARGFCFVDEEQRMRSLRLH