; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036878 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036878
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein, putative
Genome locationchr2:1837698..1838339
RNA-Seq ExpressionLag0036878
SyntenyLag0036878
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037839.1 putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-9380.75Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEELHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        SAYFEMI+KGI PNIIIGSKIVSSLYRLGKIDEA+L+LHQMADIDPVV  + S++L  SG R L+TQKI+D FG   TSIPLSN+I+YNVAIAG+CKSKK
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        VDD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

XP_022140720.1 putative pentatricopeptide repeat-containing protein At1g19290 [Momordica charantia]6.3e-9584.51Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELGC PDEITYRTLID YCKVGNM+EA K K++VEREGISAST MYNSLITG FRSEEL KLIGLLAEM SRELSPNV+TYGSLIAGWCDKGMM KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        SAYFEMI KGI PNIIIGSKIVSSL RLGKIDEA+L+LH+MADIDP+VD   S KLP SGS  LETQKI D FGQR TSIPLSN+IVYNVAIAGLCKSKK
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        VDD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

XP_022940949.1 putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita moschata]5.9e-9380.75Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEELHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        SAYFEMI+KGI PNIIIGSKIVSSLYRLGKIDEA+L+LHQMADIDPVV  + S++L  SG R L+TQKI+D FG   TSIPLSN+I+YNVAIAG+CKSKK
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        VDD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

XP_022981984.1 putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita maxima]4.1e-9481.69Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEELHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        SAYFEMIDKGI PNIIIGSKIVSSLYRLGKIDEA+L+LHQMADIDPVVD + SI+L  SG R L+TQKI+D FG   TSIPLSN+I+YNVAIAGLCK KK
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        +DD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

XP_023523251.1 putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo subsp. pepo]1.7e-9280.75Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEELHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKG M+KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        SAYFEMI+KGI PNIIIGSKIVSSLYRLGKIDEA+L+LHQMADIDPVV  + S++L  SG R L+TQKI+D FG   TSIPLSN+I+YNVAIAGLCKSKK
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        VDD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

TrEMBL top hitse value%identityAlignment
A0A0A0LD67 Uncharacterized protein1.4e-9278.87Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELG PPDEITYRTLID YCKVGN++EALKLK+M ER+GIS+ST+MYNSLITG FRSEEL KL GLLAEM +RELSPNV+TYGSLIAGWCDKGMM+KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        +AYF+MIDKGI PNIIIGSKIVSSLYR GKIDEANL+LHQ+ADIDP+  HA+S++LP S  R LETQKIVD FG++  SIP+SN+IVYN+AI GLCKSK 
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        +DD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

A0A5A7U704 Putative pentatricopeptide repeat-containing protein5.6e-8977Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELG PPDEITYRTLID YCKVGN++EALKLK+M EREGISAS +MYNSLITG FRSEEL KL GLLAEM +RELSPNV+TYGSLIAGWCDKGMM KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        +AYF+MID+GI PNI IGSKIVSSLYRLGKIDEA+ +LH+MADIDP+  HA+SI+LP S  R  ET+KIVD F ++  SIP+SN+IVYN+AI GLCKSK 
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        +DD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

A0A6J1CFX4 putative pentatricopeptide repeat-containing protein At1g192903.1e-9584.51Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELGC PDEITYRTLID YCKVGNM+EA K K++VEREGISAST MYNSLITG FRSEEL KLIGLLAEM SRELSPNV+TYGSLIAGWCDKGMM KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        SAYFEMI KGI PNIIIGSKIVSSL RLGKIDEA+L+LH+MADIDP+VD   S KLP SGS  LETQKI D FGQR TSIPLSN+IVYNVAIAGLCKSKK
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        VDD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

A0A6J1FLS8 putative pentatricopeptide repeat-containing protein At1g192902.9e-9380.75Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEELHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        SAYFEMI+KGI PNIIIGSKIVSSLYRLGKIDEA+L+LHQMADIDPVV  + S++L  SG R L+TQKI+D FG   TSIPLSN+I+YNVAIAG+CKSKK
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        VDD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

A0A6J1J3C3 putative pentatricopeptide repeat-containing protein At1g192902.0e-9481.69Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        MKELGCP D ITYRTLID YCKVGNM+EALKLKNMVEREGI  S +MYNSLITG F+SEELHKL GLLAEM  R+LSPNV+TYGSLIAGWCDKGMM+KAY
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
        SAYFEMIDKGI PNIIIGSKIVSSLYRLGKIDEA+L+LHQMADIDPVVD + SI+L  SG R L+TQKI+D FG   TSIPLSN+I+YNVAIAGLCK KK
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDLLL
        +DD RR LSDLLL
Subjt:  VDDGRRFLSDLLL

SwissProt top hitse value%identityAlignment
Q9CAM8 Pentatricopeptide repeat-containing protein At1g631502.0e-2230.58Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        M + GC PD +TY T+++  CK G++  AL L N +E   I A+  ++N++I    +   +   + L  EM ++ + PNV+TY SLI   C+ G    A 
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKS
             M++K I PN++  + ++ + ++ GK+ EA  +  +M    IDP  D      L N         +    F    +   L N   YN  I G CK 
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKS

Query:  KKVDDG
        K+V+DG
Subjt:  KKVDDG

Q9FJE6 Putative pentatricopeptide repeat-containing protein At5g599001.2e-2429.38Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        M ++G  P+++TY  LID +C+ G +  AL     +   G+  S   YNSLI G  +  ++    G +AEM +++L P V+TY SL+ G+C KG + KA 
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
          Y EM  KGI P+I   + ++S L+R G I +A  + ++MA+ +   +      +      + +  K  ++  + T    + +   Y   I GLC + +
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDL
          + + F+  L
Subjt:  VDDGRRFLSDL

Q9LN69 Putative pentatricopeptide repeat-containing protein At1g192902.3e-4748.1Show/hide
Query:  CPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFE
        C P   TY+ L   Y KVGN+ EA  +K  +ER+GI  + +MYN+LI+GAF+   L+K+  L+ E+ +R L+P V TYG+LI GWC+ GM++KAY+  FE
Subjt:  CPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFE

Query:  MIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIK--LPNSGSRDLETQKIVDYFGQRT-TSIPLSNHIVYNVAIAGLCKSKKVD
        MI+KGI  N+ I SKI +SL+RL KIDEA L+L ++ D D ++    S+K  L  S +  L+TQKI +     T   + + N+IVYNVAIAGLCK+ K++
Subjt:  MIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIK--LPNSGSRDLETQKIVDYFGQRT-TSIPLSNHIVYNVAIAGLCKSKKVD

Query:  DGRRFLSDLL
        D R+  SDLL
Subjt:  DGRRFLSDLL

Q9LQ14 Pentatricopeptide repeat-containing protein At1g62930, chloroplastic3.3e-2229.19Show/hide
Query:  GCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYF
        GC PD  TY T+++  CK G++  AL L   +E+  I A   +Y ++I      + ++  + L  EM+++ + PNV+TY SLI   C+ G    A     
Subjt:  GCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYF

Query:  EMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKKVD
        +MI++ I PN++  S ++ +  + GK+ EA  +  +M    IDP +   YS  L N         +    F    +     N + YN  I G CK+K+V+
Subjt:  EMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKKVD

Query:  DGRRFLSDL
        +G     ++
Subjt:  DGRRFLSDL

Q9SXD8 Pentatricopeptide repeat-containing protein At1g625903.3e-2229.11Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        M + GC P+ +TY  +++  CK G+   AL L N +E   I A   ++N++I    +   +   + L  EM ++ + PNV+TY SLI+  C  G    A 
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKS
            +MI+K I PN++  + ++ +  + GK  EA  +   M    IDP +   Y+  L N         K    F    +     + + YN  I G CKS
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKS

Query:  KKVDDGRRFLSDL
        K+V+DG     ++
Subjt:  KKVDDGRRFLSDL

Arabidopsis top hitse value%identityAlignment
AT1G19290.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-4848.1Show/hide
Query:  CPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFE
        C P   TY+ L   Y KVGN+ EA  +K  +ER+GI  + +MYN+LI+GAF+   L+K+  L+ E+ +R L+P V TYG+LI GWC+ GM++KAY+  FE
Subjt:  CPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFE

Query:  MIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIK--LPNSGSRDLETQKIVDYFGQRT-TSIPLSNHIVYNVAIAGLCKSKKVD
        MI+KGI  N+ I SKI +SL+RL KIDEA L+L ++ D D ++    S+K  L  S +  L+TQKI +     T   + + N+IVYNVAIAGLCK+ K++
Subjt:  MIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIK--LPNSGSRDLETQKIVDYFGQRT-TSIPLSNHIVYNVAIAGLCKSKKVD

Query:  DGRRFLSDLL
        D R+  SDLL
Subjt:  DGRRFLSDLL

AT1G62590.1 pentatricopeptide (PPR) repeat-containing protein2.4e-2329.11Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        M + GC P+ +TY  +++  CK G+   AL L N +E   I A   ++N++I    +   +   + L  EM ++ + PNV+TY SLI+  C  G    A 
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKS
            +MI+K I PN++  + ++ +  + GK  EA  +   M    IDP +   Y+  L N         K    F    +     + + YN  I G CKS
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKS

Query:  KKVDDGRRFLSDL
        K+V+DG     ++
Subjt:  KKVDDGRRFLSDL

AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.4e-2329.19Show/hide
Query:  GCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYF
        GC PD  TY T+++  CK G++  AL L   +E+  I A   +Y ++I      + ++  + L  EM+++ + PNV+TY SLI   C+ G    A     
Subjt:  GCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYF

Query:  EMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKKVD
        +MI++ I PN++  S ++ +  + GK+ EA  +  +M    IDP +   YS  L N         +    F    +     N + YN  I G CK+K+V+
Subjt:  EMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKKVD

Query:  DGRRFLSDL
        +G     ++
Subjt:  DGRRFLSDL

AT1G63150.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-2330.58Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        M + GC PD +TY T+++  CK G++  AL L N +E   I A+  ++N++I    +   +   + L  EM ++ + PNV+TY SLI   C+ G    A 
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKS
             M++K I PN++  + ++ + ++ GK+ EA  +  +M    IDP  D      L N         +    F    +   L N   YN  I G CK 
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQM--ADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKS

Query:  KKVDDG
        K+V+DG
Subjt:  KKVDDG

AT5G59900.1 Pentatricopeptide repeat (PPR) superfamily protein8.7e-2629.38Show/hide
Query:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY
        M ++G  P+++TY  LID +C+ G +  AL     +   G+  S   YNSLI G  +  ++    G +AEM +++L P V+TY SL+ G+C KG + KA 
Subjt:  MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAY

Query:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK
          Y EM  KGI P+I   + ++S L+R G I +A  + ++MA+ +   +      +      + +  K  ++  + T    + +   Y   I GLC + +
Subjt:  SAYFEMIDKGIEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKK

Query:  VDDGRRFLSDL
          + + F+  L
Subjt:  VDDGRRFLSDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAACTAGGCTGTCCACCTGATGAAATAACATATAGAACTTTAATTGATGAATATTGTAAAGTTGGAAATATGATAGAAGCCTTGAAATTGAAGAACATGGTTGA
AAGAGAGGGAATCAGTGCTTCCACTAAAATGTACAATTCTCTTATTACTGGTGCTTTTAGATCTGAAGAATTACACAAATTGATTGGTCTTCTAGCTGAGATGAATAGCC
GTGAACTATCTCCCAATGTTATAACTTATGGCTCCCTTATAGCTGGTTGGTGTGATAAGGGGATGATGGAAAAAGCGTATAGTGCATACTTTGAGATGATCGACAAAGGG
ATTGAACCTAATATTATTATTGGCAGCAAAATTGTCAGTAGTCTGTACCGACTGGGTAAGATTGATGAAGCAAATTTGGTCTTGCATCAAATGGCAGATATTGATCCTGT
TGTAGATCATGCATATTCTATAAAATTGCCCAATTCTGGTTCAAGAGATCTTGAAACTCAGAAAATTGTGGATTATTTTGGCCAAAGGACCACGAGCATCCCTCTGTCGA
ACCATATTGTCTATAATGTTGCAATTGCAGGGCTGTGCAAGTCTAAGAAGGTTGATGATGGCAGAAGATTTTTGTCAGATTTGTTACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAACTAGGCTGTCCACCTGATGAAATAACATATAGAACTTTAATTGATGAATATTGTAAAGTTGGAAATATGATAGAAGCCTTGAAATTGAAGAACATGGTTGA
AAGAGAGGGAATCAGTGCTTCCACTAAAATGTACAATTCTCTTATTACTGGTGCTTTTAGATCTGAAGAATTACACAAATTGATTGGTCTTCTAGCTGAGATGAATAGCC
GTGAACTATCTCCCAATGTTATAACTTATGGCTCCCTTATAGCTGGTTGGTGTGATAAGGGGATGATGGAAAAAGCGTATAGTGCATACTTTGAGATGATCGACAAAGGG
ATTGAACCTAATATTATTATTGGCAGCAAAATTGTCAGTAGTCTGTACCGACTGGGTAAGATTGATGAAGCAAATTTGGTCTTGCATCAAATGGCAGATATTGATCCTGT
TGTAGATCATGCATATTCTATAAAATTGCCCAATTCTGGTTCAAGAGATCTTGAAACTCAGAAAATTGTGGATTATTTTGGCCAAAGGACCACGAGCATCCCTCTGTCGA
ACCATATTGTCTATAATGTTGCAATTGCAGGGCTGTGCAAGTCTAAGAAGGTTGATGATGGCAGAAGATTTTTGTCAGATTTGTTACTTTGA
Protein sequenceShow/hide protein sequence
MKELGCPPDEITYRTLIDEYCKVGNMIEALKLKNMVEREGISASTKMYNSLITGAFRSEELHKLIGLLAEMNSRELSPNVITYGSLIAGWCDKGMMEKAYSAYFEMIDKG
IEPNIIIGSKIVSSLYRLGKIDEANLVLHQMADIDPVVDHAYSIKLPNSGSRDLETQKIVDYFGQRTTSIPLSNHIVYNVAIAGLCKSKKVDDGRRFLSDLLL