; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0036882 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0036882
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr2:1853457..1854937
RNA-Seq ExpressionLag0036882
SyntenyLag0036882
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]1.1e-4530.94Show/hide
Query:  IDSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPI-NRNLRDKLIWHYDRTGVYTVKSGYKL--YMKDKLDGISS-SVNPMKQIWENIWKMKIPTKIK
        + + V D    SG W++  L       + D    IP+ +    D LIWHY+R G+Y+VKSGY+L    KDK+ G  S  V+   + W+ IW +KIP KIK
Subjt:  IDSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPI-NRNLRDKLIWHYDRTGVYTVKSGYKL--YMKDKLDGISS-SVNPMKQIWENIWKMKIPTKIK

Query:  TFCWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRN
         F W+   + LP    L +R I    ICP C +  E+  H +++C+ A+E+W+ +      EE    S  + W  +    S E   L A+ CW +W  RN
Subjt:  TFCWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRN

Query:  KSIHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMD
          I +  + TA      +    + +  +N+       +     R+S    P+  W PP    +K+N D A  +   + GVGV+ RN  G  + A  R + 
Subjt:  KSIHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMD

Query:  IFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCND--TWV
            A   EL A  EGL+ A+ +GF   V+E D +  +  I            L+E +  L+  F  +  ++ PR  NKVAH +A++A  F CN+  TW+
Subjt:  IFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCND--TWV

Query:  GYFP
           P
Subjt:  GYFP

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.6e-5030.33Show/hide
Query:  DSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPI-NRNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCW
        ++ V+D I     W + +L +  +  D + I  I + +    D+++WH+D+ G Y+VKSGY+L +         S N   ++W+  W + +P K+K F W
Subjt:  DSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPI-NRNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCW

Query:  KALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIH
        +AL NILP   NL  R      IC  C    E   H L  CK A++IW L    V   ++ N        ++ SR S    EL+   CW IW  RNK I 
Subjt:  KALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIH

Query:  DETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLE
        +     ++F +      L++Y+R +    V     D  + + +       W PP     KLN DAA        G+G I R+ EG  +  G +       
Subjt:  DETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLE

Query:  AHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCNDTWVGYFPS
          +AE  AIH GL+ A  +    L+VESDCK  VE +N      +++  ++  +      F  + F F PR  N  AH +A++A      D WVG FP+
Subjt:  AHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCNDTWVGYFPS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]8.6e-6234.33Show/hide
Query:  IDSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPINR-NLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFC
        +D+ V+ FI   G+WD+  ++ +  + D D+I S+PI+  NL+D  +WHYD+ G Y+V+SGYKLYM  K +  S+S N     W +IWK+ +PTKIK F 
Subjt:  IDSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPINR-NLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFC

Query:  WKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFD-CVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKS
        W++ +  +P   NL  RGI     C IC    E+  H  F CKRA++IW+  F     L  E N S ++ W  +  +   ++L L A T W IW DRN  
Subjt:  WKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFD-CVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKS

Query:  IHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIF
        IH +     +F+ +W+  +L+S+ ++   +   +T       +S     +  W P      KLN+DAAC      T  G I R+   + + A +  +   
Subjt:  IHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIF

Query:  LEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYA-RSFQCNDTWVGYF
        L   +AE+  I EGLK A +  F  L VESD  +A++ I  +     D +  V  I AL  CF  ISF    R  N+ AHG+A++   S      W+  F
Subjt:  LEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYA-RSFQCNDTWVGYF

Query:  PS
        P+
Subjt:  PS

XP_030496634.1 uncharacterized protein LOC115712492 [Cannabis sativa]7.1e-4829.85Show/hide
Query:  VSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPIN-RNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKAL
        VS FI    +W+I  LN+   S D D I +IP++     D+LIWH+  TG YTV SG+ L      +  + + +     W+  W +++P+K+K F W+ +
Subjt:  VSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPIN-RNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKAL

Query:  NNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIW---KLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIH
         N LP    L  R +     C +C  + E+  H LF C  A+++W   K T D       +NG   D  I ++S HS+++LELI  T WAIW +RNK IH
Subjt:  NNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIW---KLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIH

Query:  DETTPTAQFRSQWILDYLESYRRSNSKDPVR------KTTSDASLRES-------RESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAA
           + ++   + +   +L  Y+R+ +K+  +       T+S AS  E+       + S+    WSPP +   K+N DAA      + GVG I R+  G+ 
Subjt:  DETTPTAQFRSQWILDYLESYRRSNSKDPVR------KTTSDASLRES-------RESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAA

Query:  IIAGARSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSF
        I A ++ +     +   E  A+   L  A+ L      VE+D       +N      S    L+  +  L+  F  ++     R+ N+ AHG+A+YA   
Subjt:  IIAGARSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSF

Query:  QCNDTWVGYFPS
          + +W+G  P+
Subjt:  QCNDTWVGYFPS

XP_030968750.1 uncharacterized protein LOC115989220 [Quercus lobata]4.3e-4529.52Show/hide
Query:  WDIGKLNKAVLSSDHDIIRSIPINRNL-RDKLIWHYDRTGVYTVKSGY----KLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKALNNILPN
        W + K  +  L  + + I +IP++ N+  DK+IW  ++  +++VKS Y     L  K +L G  S  +    +W+ +W++K+P+KI+ F WKA    LP 
Subjt:  WDIGKLNKAVLSSDHDIIRSIPINRNL-RDKLIWHYDRTGVYTVKSGY----KLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKALNNILPN

Query:  RVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIHDETTPTAQF
        R+NLH RGI+T + CP+C +  E++ H L  C+R  ++W    +C       N + VD  ++I +R +  +LE +  T W+IW  RNK +H+        
Subjt:  RVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIHDETTPTAQF

Query:  RSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLEAHIAELWAI
           +     E Y+ +     +R+  SD              W+ P   F+K+N D A   +  ++ VGVI R+ EG  ++A ++ ++   EA   E +A+
Subjt:  RSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLEAHIAELWAI

Query:  HEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYAR
         E +  A   G  ++V+ESD    V+ IN  + +  D+ ++++ I  L+  F   + K   R+ N+VAH +A+ A+
Subjt:  HEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYAR

TrEMBL top hitse value%identityAlignment
A0A5E4FZN9 PREDICTED: retrotransposon5.5e-4630.94Show/hide
Query:  IDSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPI-NRNLRDKLIWHYDRTGVYTVKSGYKL--YMKDKLDGISS-SVNPMKQIWENIWKMKIPTKIK
        + + V D    SG W++  L       + D    IP+ +    D LIWHY+R G+Y+VKSGY+L    KDK+ G  S  V+   + W+ IW +KIP KIK
Subjt:  IDSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPI-NRNLRDKLIWHYDRTGVYTVKSGYKL--YMKDKLDGISS-SVNPMKQIWENIWKMKIPTKIK

Query:  TFCWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRN
         F W+   + LP    L +R I    ICP C +  E+  H +++C+ A+E+W+ +      EE    S  + W  +    S E   L A+ CW +W  RN
Subjt:  TFCWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRN

Query:  KSIHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMD
          I +  + TA      +    + +  +N+       +     R+S    P+  W PP    +K+N D A  +   + GVGV+ RN  G  + A  R + 
Subjt:  KSIHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMD

Query:  IFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCND--TWV
            A   EL A  EGL+ A+ +GF   V+E D +  +  I            L+E +  L+  F  +  ++ PR  NKVAH +A++A  F CN+  TW+
Subjt:  IFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCND--TWV

Query:  GYFP
           P
Subjt:  GYFP

A0A6J1DX30 uncharacterized protein LOC1110248744.2e-6234.33Show/hide
Query:  IDSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPINR-NLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFC
        +D+ V+ FI   G+WD+  ++ +  + D D+I S+PI+  NL+D  +WHYD+ G Y+V+SGYKLYM  K +  S+S N     W +IWK+ +PTKIK F 
Subjt:  IDSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPINR-NLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFC

Query:  WKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFD-CVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKS
        W++ +  +P   NL  RGI     C IC    E+  H  F CKRA++IW+  F     L  E N S ++ W  +  +   ++L L A T W IW DRN  
Subjt:  WKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFD-CVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKS

Query:  IHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIF
        IH +     +F+ +W+  +L+S+ ++   +   +T       +S     +  W P      KLN+DAAC      T  G I R+   + + A +  +   
Subjt:  IHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIF

Query:  LEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYA-RSFQCNDTWVGYF
        L   +AE+  I EGLK A +  F  L VESD  +A++ I  +     D +  V  I AL  CF  ISF    R  N+ AHG+A++   S      W+  F
Subjt:  LEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYA-RSFQCNDTWVGYF

Query:  PS
        P+
Subjt:  PS

A0A803PAX6 Uncharacterized protein1.6e-4528.28Show/hide
Query:  SGDWDIGKLNKAVLSSDHDIIRSI-PINRNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKALNNILPNR
        +G+W +  + ++  + D  II  + P  ++  D LIWH+   G+YTV+SGY++   D      SS    ++ W +IWK++ P KI+ F W+  N  +P  
Subjt:  SGDWDIGKLNKAVLSSDHDIIRSI-PINRNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKALNNILPNR

Query:  VNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIHDETTPTAQFR
          L  RG++    C  C Q+ E  +HCL+ C  +++IWK  +    + ++  G+++D  I I ++ ++E         W IW  RNK            R
Subjt:  VNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIHDETTPTAQFR

Query:  SQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPI--ACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLEAHIAELWA
            +   ES+ +    +       D  L     + P+    W PP V  + +NSDA+        G+GV+ R  +G    A  + ++      +AE  A
Subjt:  SQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPI--ACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLEAHIAELWA

Query:  IHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDI-SFKFCPRDINKVAHGIARYARSFQCNDTWVGYFPSCGSA
        I  G+  A+    +  +++SDC   +E+I GK    +D  AL++ +    P F+   +     R+ N+VAH +A+ A S +CN  W G +PSC SA
Subjt:  IHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDI-SFKFCPRDINKVAHGIARYARSFQCNDTWVGYFPSCGSA

A0A803Q8E0 Uncharacterized protein5.5e-4629.13Show/hide
Query:  VSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPIN-RNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKAL
        VS FI    +W+I  LN+   S D D I +IP++     D+LIWH+  +G YTV SG+ L      +  + + +     W+  W + +P+K+K F W+ +
Subjt:  VSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPIN-RNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKAL

Query:  NNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIW---KLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIH
         N LP    L  R +     C +C  + E+  H LF C  A+++W   K   D       +NG   D  I ++S HS+++LELI  T WAIW +RNK IH
Subjt:  NNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIW---KLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIH

Query:  DETTPTAQFRSQWILDYLESYRRSNSKDPVR------KTTSDASLRESRES-------DPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAA
           + ++Q  + +   YL  Y R+ +K+  +       T+S+AS   +  +       +  + WSPP +   K+N DAA      + GVG I R   G+ 
Subjt:  DETTPTAQFRSQWILDYLESYRRSNSKDPVR------KTTSDASLRESRES-------DPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAA

Query:  IIAGARSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSF
        + A ++ +     +   E  A+   L  A+ L      VE+D       +N  +   S    L+  +  L+  F  ++     R+ N+ AHG+A+YA   
Subjt:  IIAGARSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSF

Query:  QCNDTWVGYFPS
          +  W+G  P+
Subjt:  QCNDTWVGYFPS

A0A803Q8I6 Uncharacterized protein4.5e-4829.48Show/hide
Query:  VSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPIN-RNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKAL
        VS+FI    +W+I  LN+   S D D I +IP++     D+LIWH+  TG YTV SG+ L      +  ++  N     W   W + +P K+K F W+ +
Subjt:  VSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPIN-RNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKAL

Query:  NNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIW---KLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIH
         N LP   +L  R +   + C +C  + E+  H LF C +A+++W   K T D       +NG   D  I ++S HS+++ ELI  T WAIW DRNK I 
Subjt:  NNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIW---KLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIH

Query:  DETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPI--------ACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGA
           +  +Q  + +   +LE Y R+ +K+  ++   + ++  S +S P+          WSPP +   K+N D        + GVG I R+ +G+ + A +
Subjt:  DETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPI--------ACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGA

Query:  RSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCNDT
        + +     +   E  A+   L  AL L      V++D       IN  +   S    L+  +  L+  F  ++     R+ N+ AHG+A+YA     +  
Subjt:  RSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCNDT

Query:  WVGYFPS
        W+G  P+
Subjt:  WVGYFPS

SwissProt top hitse value%identityAlignment
O48716 Protein JINGUBANG1.6e-0564.86Show/hide
Query:  GSADKTICMW-RKGAIHTSFSADRPHTGPMKCLAVDS
        GSADKTIC+W R G IHT  S    HTGP+KCLAV++
Subjt:  GSADKTICMW-RKGAIHTSFSADRPHTGPMKCLAVDS

P0C2F6 Putative ribonuclease H protein At1g657505.3e-2223.2Show/hide
Query:  DFILPSGDWDIGKLNKAVLSSDHDIIRSIPIN--RNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKALN
        D  +P   WD  K++    ++    +R++ ++     RD+L W + + G ++V+S Y++   D++   +     M   +  +WK+++P ++KTF W   N
Subjt:  DFILPSGDWDIGKLNKAVLSSDHDIIRSIPIN--RNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKALN

Query:  NILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWI--KINSRHSRENL---ELIAFTCWAIWLDRNKSI
          +      H R +    +C +C    E+  H L  C     IW         +  F+ SL + W+   +  R   E++    + A   W  W  R  +I
Subjt:  NILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWI--KINSRHSRENL---ELIAFTCWAIWLDRNKSI

Query:  HDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDI-F
          E T   + R +++ ++     R++S + +   T     R       +  W  P V + K+N+D A   NP +   G + R+  GA    G  S++I  
Subjt:  HDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDI-F

Query:  LEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARS
          A  AELW ++ GL  A      ++ +E D ++ V F+    +    +  LV      +     +      R+ N++A G+A YA S
Subjt:  LEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARS

Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein3.4e-1623.25Show/hide
Query:  QIWENIWKMKIPTKIKTFCWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLE----EEFNGSLVDRWIKINSRH
        ++ + IWK+ +  KIK F W+ +   L     L SR ID   IC  C    E   H +F C   Q +W+     +  +      F  +L +R I+++   
Subjt:  QIWENIWKMKIPTKIKTFCWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLE----EEFNGSLVDRWIKINSRH

Query:  SRENLE--LIAFTCWAIWLDRNKSIHDETTPTAQFRS-QWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPM
        +  +L+  L  +  W +W  RN  +  +   +  + + + I D  E    + + +      +   ++ SR     + W+PP   + K N D+      P 
Subjt:  SRENLE--LIAFTCWAIWLDRNKSIHDETTPTAQFRS-QWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPM

Query:  TGVGVICRNKEGAAIIAG-ARSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRD
        T  G   R   G  ++ G A+        H   L  +H  L+   + G   +  ESD K  V  IN      S +  L+  I   M      S +F  R+
Subjt:  TGVGVICRNKEGAAIIAG-ARSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRD

Query:  INKVAHGIARYARS
         N  A  +A +  +
Subjt:  INKVAHGIARYARS

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-1825.63Show/hide
Query:  CPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDR--WIKINSRHSRENL----ELIAFTCWAIWLDRNKSI---HDETTPTAQFRSQWI
        C  C  S E  +H LF C  A+ +W ++    + E E+  SL     W+ +N       L     L+ +  W +W  RN+ +    +   P    R+   
Subjt:  CPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDR--WIKINSRHSRENL----ELIAFTCWAIWLDRNKSI---HDETTPTAQFRSQWI

Query:  LDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLEAHIAELWAIHEGLK
         +   + R    K    +   + S++          W  P  ++ K N+DA      P  G+G I RN+ G  +  GAR++        AEL A+   + 
Subjt:  LDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLEAHIAELWAIHEGLK

Query:  QALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCND
              + +++ ESD +  V  +N     W  ++  +E I  L+  F ++ F+F PR  NKVA  IAR + SF   D
Subjt:  QALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCND

AT3G09510.1 Ribonuclease H-like superfamily protein5.3e-3328.14Show/hide
Query:  WDIGKLNKAVLSSDHDIIRSIPINRNLR-DKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMK---QIWENIWKMKIPTKIKTFCWKALNNILPNR
        WD  K+++ V  SDH  I  I + ++ + DK+IW+Y+ TG YTV+SGY L   D    I  ++NP      +   IW + I  K+K F W+AL+  L   
Subjt:  WDIGKLNKAVLSSDHDIIRSIPINRNLR-DKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMK---QIWENIWKMKIPTKIKTFCWKALNNILPNR

Query:  VNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEE------EFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIHDETT
          L +RG+     CP C + NE+ +H LF C  A   W+L+   +   +      E N S +  +++  +      L L  +  W IW  RN  + ++  
Subjt:  VNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEE------EFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIHDETT

Query:  PTAQFRSQWILD-YLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLEAHI
         +    S+ +L    E++   N+    +KT S        + +    W  P   + K N DA           G I RN  G  I  G+  +        
Subjt:  PTAQFRSQWILD-YLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLEAHI

Query:  AELWAIHEGLKQALSLGFLKLVVESDCKMAVEFING---KATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCNDTWVGYFP
        AE  A+   L+Q    G+ ++ +E DC+  +  ING    ++L + +E +  S WA    F  I F F  R  NK+AH +A+Y  ++    +  G  P
Subjt:  AELWAIHEGLKQALSLGFLKLVVESDCKMAVEFING---KATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCNDTWVGYFP

AT3G25270.1 Ribonuclease H-like superfamily protein1.2e-1623.08Show/hide
Query:  QIWENIWKMKIPTKIKTFCWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKI-----NSR
        +I   IWK+K   KIK F WK L+  L    NL  R I     C  C Q +E S H  F C  AQ++W+ +      E    G  ++  +++      + 
Subjt:  QIWENIWKMKIPTKIKTFCWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKI-----NSR

Query:  HSRENLELIAFTCWAIWLDRNKSIHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIAC---WSPPRVEFWKLNSDAACLANPP
           +   L  +  W +W  RN+ +  + + + Q   Q   + ++ +  +N+       + +  +  SR   P      W  P   + K N D A      
Subjt:  HSRENLELIAFTCWAIWLDRNKSIHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIAC---WSPPRVEFWKLNSDAACLANPP

Query:  MTGVGVICRNKEGAAIIAGARSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVES-IWALMPCFLDISFKFCPR
            G + R++ G  + +G        ++  +E  A+   ++ A S G+ K++ E D K   E +N +   +     + E   W     F +  FK+ PR
Subjt:  MTGVGVICRNKEGAAIIAGARSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVES-IWALMPCFLDISFKFCPR

Query:  DINKVAHGIARY
          N+ A  +A++
Subjt:  DINKVAHGIARY

AT4G29090.1 Ribonuclease H-like superfamily protein1.5e-3226.14Show/hide
Query:  KVSDFILPSG-DWDIGKLNKAVLSSDHDIIRSI-PINRNLRDKLIWHYDRTGVYTVKSGYKLYMK--DKLDGISSSVNP-MKQIWENIWKMKIPTKIKTF
        KVSD I  SG +W    +       +  +I  + P  R + D   W Y  +G YTVKSGY +  +  +K         P +  I++ IWK +   KI+ F
Subjt:  KVSDFILPSG-DWDIGKLNKAVLSSDHDIIRSI-PINRNLRDKLIWHYDRTGVYTVKSGYKLYMK--DKLDGISSSVNP-MKQIWENIWKMKIPTKIKTF

Query:  CWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSL-VDRWIKINSRHSRENLE----LIAFTCWAIWL
         WK L+N LP    L  R +     C  C    E  +H LF C  A+  W ++   + L  E+  S+ V+ +   N  +     E    L+ +  W +W 
Subjt:  CWKALNNILPNRVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSL-VDRWIKINSRHSRENLE----LIAFTCWAIWL

Query:  DRNKSIHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGAR
        +RN+ +       AQ   +   D LE +R       +R        +          W PP  ++ K N+DA    +    G+G + RN++G     GAR
Subjt:  DRNKSIHDETTPTAQFRSQWILDYLESYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGAR

Query:  SMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSF
        ++        AEL A+   +       +  ++ ESD ++ +E +N    +W  ++  ++ +  L+  F ++ F F PR+ N +A  +AR + SF
Subjt:  SMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESDCKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATTCGAAGGTATCAGATTTTATTCTTCCATCAGGAGATTGGGATATTGGAAAATTAAATAAAGCTGTTCTAAGCTCGGATCATGATATAATTAGGAGTATCCC
CATTAACAGAAACCTAAGAGATAAACTAATATGGCATTATGATAGAACTGGAGTCTACACTGTAAAAAGTGGCTATAAACTCTACATGAAGGATAAATTAGATGGTATAT
CTTCTAGTGTTAACCCTATGAAACAAATATGGGAAAATATTTGGAAAATGAAAATTCCAACAAAAATTAAAACGTTTTGCTGGAAAGCTTTAAACAATATTTTACCTAAT
AGGGTTAACCTTCATAGTAGAGGTATCGATACACCTATCATCTGTCCTATATGTACTCAATCAAATGAAAACTCGGACCACTGCCTATTTGTTTGTAAAAGAGCTCAGGA
AATATGGAAACTAACCTTTGATTGTGTTTTCTTGGAAGAGGAATTCAATGGAAGCCTAGTAGACAGATGGATCAAAATCAACTCCAGACATTCAAGGGAGAATCTCGAGC
TGATAGCGTTTACCTGCTGGGCGATTTGGTTAGACAGAAACAAAAGCATCCATGACGAAACAACTCCAACAGCTCAATTTAGAAGCCAATGGATTTTGGATTACCTGGAA
AGCTATCGTCGATCTAACTCGAAGGATCCTGTGAGGAAGACGACCAGTGACGCTTCTTTGAGAGAATCTAGAGAGTCTGATCCTATTGCATGTTGGAGTCCCCCTCGAGT
GGAGTTTTGGAAGCTAAACTCAGATGCCGCTTGTTTGGCAAATCCTCCAATGACAGGCGTCGGGGTGATATGTAGGAATAAGGAAGGGGCTGCTATAATAGCTGGTGCTA
GGTCCATGGATATTTTTTTGGAGGCCCATATTGCTGAGCTTTGGGCTATTCATGAAGGCTTAAAACAAGCTTTATCCCTAGGCTTTCTGAAATTGGTGGTAGAATCCGAT
TGCAAAATGGCTGTCGAATTTATAAATGGGAAGGCCACTTTATGGAGTGATGTAGAGGCCTTGGTAGAATCCATTTGGGCTTTAATGCCTTGCTTTTTGGATATTAGTTT
CAAATTCTGTCCTAGAGATATTAACAAAGTGGCCCATGGAATAGCTAGATATGCTAGATCTTTTCAATGTAATGACACTTGGGTAGGCTATTTCCCAAGTTGTGGCTCCG
CCGACAAGACCATATGCATGTGGCGCAAAGGAGCAATCCACACGTCTTTCAGTGCTGACAGACCCCACACTGGGCCTATGAAGTGCTTGGCAGTGGATAGTGTACAGTGG
GAGCAGCCTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGATTCGAAGGTATCAGATTTTATTCTTCCATCAGGAGATTGGGATATTGGAAAATTAAATAAAGCTGTTCTAAGCTCGGATCATGATATAATTAGGAGTATCCC
CATTAACAGAAACCTAAGAGATAAACTAATATGGCATTATGATAGAACTGGAGTCTACACTGTAAAAAGTGGCTATAAACTCTACATGAAGGATAAATTAGATGGTATAT
CTTCTAGTGTTAACCCTATGAAACAAATATGGGAAAATATTTGGAAAATGAAAATTCCAACAAAAATTAAAACGTTTTGCTGGAAAGCTTTAAACAATATTTTACCTAAT
AGGGTTAACCTTCATAGTAGAGGTATCGATACACCTATCATCTGTCCTATATGTACTCAATCAAATGAAAACTCGGACCACTGCCTATTTGTTTGTAAAAGAGCTCAGGA
AATATGGAAACTAACCTTTGATTGTGTTTTCTTGGAAGAGGAATTCAATGGAAGCCTAGTAGACAGATGGATCAAAATCAACTCCAGACATTCAAGGGAGAATCTCGAGC
TGATAGCGTTTACCTGCTGGGCGATTTGGTTAGACAGAAACAAAAGCATCCATGACGAAACAACTCCAACAGCTCAATTTAGAAGCCAATGGATTTTGGATTACCTGGAA
AGCTATCGTCGATCTAACTCGAAGGATCCTGTGAGGAAGACGACCAGTGACGCTTCTTTGAGAGAATCTAGAGAGTCTGATCCTATTGCATGTTGGAGTCCCCCTCGAGT
GGAGTTTTGGAAGCTAAACTCAGATGCCGCTTGTTTGGCAAATCCTCCAATGACAGGCGTCGGGGTGATATGTAGGAATAAGGAAGGGGCTGCTATAATAGCTGGTGCTA
GGTCCATGGATATTTTTTTGGAGGCCCATATTGCTGAGCTTTGGGCTATTCATGAAGGCTTAAAACAAGCTTTATCCCTAGGCTTTCTGAAATTGGTGGTAGAATCCGAT
TGCAAAATGGCTGTCGAATTTATAAATGGGAAGGCCACTTTATGGAGTGATGTAGAGGCCTTGGTAGAATCCATTTGGGCTTTAATGCCTTGCTTTTTGGATATTAGTTT
CAAATTCTGTCCTAGAGATATTAACAAAGTGGCCCATGGAATAGCTAGATATGCTAGATCTTTTCAATGTAATGACACTTGGGTAGGCTATTTCCCAAGTTGTGGCTCCG
CCGACAAGACCATATGCATGTGGCGCAAAGGAGCAATCCACACGTCTTTCAGTGCTGACAGACCCCACACTGGGCCTATGAAGTGCTTGGCAGTGGATAGTGTACAGTGG
GAGCAGCCTGGATAA
Protein sequenceShow/hide protein sequence
MIDSKVSDFILPSGDWDIGKLNKAVLSSDHDIIRSIPINRNLRDKLIWHYDRTGVYTVKSGYKLYMKDKLDGISSSVNPMKQIWENIWKMKIPTKIKTFCWKALNNILPN
RVNLHSRGIDTPIICPICTQSNENSDHCLFVCKRAQEIWKLTFDCVFLEEEFNGSLVDRWIKINSRHSRENLELIAFTCWAIWLDRNKSIHDETTPTAQFRSQWILDYLE
SYRRSNSKDPVRKTTSDASLRESRESDPIACWSPPRVEFWKLNSDAACLANPPMTGVGVICRNKEGAAIIAGARSMDIFLEAHIAELWAIHEGLKQALSLGFLKLVVESD
CKMAVEFINGKATLWSDVEALVESIWALMPCFLDISFKFCPRDINKVAHGIARYARSFQCNDTWVGYFPSCGSADKTICMWRKGAIHTSFSADRPHTGPMKCLAVDSVQW
EQPG