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Lag0037060 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037060
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPre-mRNA-processing protein 40A-like
Genome locationchr2:3088249..3088773
RNA-Seq ExpressionLag0037060
SyntenyLag0037060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064469.1 hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa]8.6e-5075.17Show/hide
Query:  NVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASY--FGCCKWDGLKERDP
        NVPFSWEAKPGVPK QS+ SPSASL E SMLKLPSPPCRSESARL GD S  I Y PPRC AES R+AKD+LWLEA S   AS   FGCCK D  K+ DP
Subjt:  NVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASY--FGCCKWDGLKERDP

Query:  FVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKC
        FVEAYKKCT+  SMS R I+GGSAT+GVKRP+I RRVLFSLSRKC
Subjt:  FVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKC

KAG6608406.1 hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5471.43Show/hide
Query:  NSRPIEFDIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASY
        +S P++FD E LQT TNVPFSWEAKPGVPKLQS SSP+ S  ERS LKLPSPP RSESARLP D   AIP   PR  A+S R+AK++LWL+A S D+ S 
Subjt:  NSRPIEFDIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASY

Query:  --FGCCKWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKC
          FGCCK DGLKE DPFVEAYKKCT+GPS +RR I GGSAT+GVKRP IRRR+LFSLSRKC
Subjt:  --FGCCKWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKC

KAG7037747.1 hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-5370.81Show/hide
Query:  NSRPIEFDIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASY
        +S P++FD E LQT TNVPFSWEAKPGVPKLQS SSP+ S  E S LKLPSPP RSESARLP D   AIP   PR  A+S R+AK++LWL+A S D+ S 
Subjt:  NSRPIEFDIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASY

Query:  --FGCCKWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKC
          FGCCK DGLKE DPFVEAYKKCT+GPS +RR I GGSAT+GVKRP IRRR+LFSLSRKC
Subjt:  --FGCCKWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKC

KHN17177.1 hypothetical protein glysoja_010636 [Glycine soja]5.3e-0728.03Show/hide
Query:  DIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSD---YASYFGCC
        D+   +T  NVPFSWE KPG+ K+ +      S+ E  + KLP PPC  E         +A  +H    + + +      + L  C+     Y +    C
Subjt:  DIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSD---YASYFGCC

Query:  KWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKCFV
         W  ++++DPF+ A+K+CT     S  T++      G++    +    FS +R C V
Subjt:  KWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKCFV

XP_004141298.1 uncharacterized protein LOC101203728 [Cucumis sativus]4.3e-4968.1Show/hide
Query:  MGNSRPIEFDIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASL--CERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSD
        M +SRPIE D EFL T TNVPFSWEAKPGVPK QS+ SP+ASL   E +MLKLPSPPCRSESARL GD S  I Y PPRC AES R+AKD+LWLEA S  
Subjt:  MGNSRPIEFDIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASL--CERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSD

Query:  YASY--FGCCKWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSR
         AS   FGCCK D  K+ DPFVEAYKKC +      R+I+G SAT+G KRP+I RRVLFSLSR
Subjt:  YASY--FGCCKWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSR

TrEMBL top hitse value%identityAlignment
A0A067LAQ4 Uncharacterized protein1.3e-0634.51Show/hide
Query:  NVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASYFGCCKWDGLKERDPFV
        NVPFSWE KPGV K+ +  + +    ++ ++KLP PPC  ES R+      +IP  P                   C+    S     KWD     DPF+
Subjt:  NVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASYFGCCKWDGLKERDPFV

Query:  EAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRK
         AYK+CT   + S+  ++GGSA  G  R  +R+  +F LS K
Subjt:  EAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRK

A0A0A0KZZ9 Uncharacterized protein9.9e-5268.67Show/hide
Query:  MGNSRPIEFDIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASL--CERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSD
        M +SRPIE D EFL T TNVPFSWEAKPGVPK QS+ SP+ASL   E +MLKLPSPPCRSESARL GD S  I Y PPRC AES R+AKD+LWLEA S  
Subjt:  MGNSRPIEFDIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASL--CERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSD

Query:  YASY--FGCCKWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKCF
         AS   FGCCK D  K+ DPFVEAYKKC +      R+I+G SAT+G KRP+I RRVLFSLSRKCF
Subjt:  YASY--FGCCKWDGLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKCF

A0A2K1XNQ3 Uncharacterized protein3.1e-0532.87Show/hide
Query:  LQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKL----PSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASYFGCCKWD
        +Q+  NVPFSWE KPGV K+ +R            LKL    P PPC S+S + P D S  +P  P     +  RI                        
Subjt:  LQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKL----PSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASYFGCCKWD

Query:  GLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRR
           + DPF+ AYKKC   P   + T S G    G  RP I R+
Subjt:  GLKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRR

A0A5D3D9E3 Uncharacterized protein4.2e-5075.17Show/hide
Query:  NVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASY--FGCCKWDGLKERDP
        NVPFSWEAKPGVPK QS+ SPSASL E SMLKLPSPPCRSESARL GD S  I Y PPRC AES R+AKD+LWLEA S   AS   FGCCK D  K+ DP
Subjt:  NVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASY--FGCCKWDGLKERDP

Query:  FVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKC
        FVEAYKKCT+  SMS R I+GGSAT+GVKRP+I RRVLFSLSRKC
Subjt:  FVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKC

K7MNJ6 Uncharacterized protein3.1e-0532.8Show/hide
Query:  DIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASYFGCCKWD
        D+  ++T  NVPFSWE KPG+ K+ +    + +    SM+  P PPC S S+    D       H  +   ES+ +      L   S          + +
Subjt:  DIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASYFGCCKWD

Query:  GLKERDPFVEAYKKCTDGPSMSRRT
          KE DPFVEAYKKCT  P + +++
Subjt:  GLKERDPFVEAYKKCTDGPSMSRRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCTCGGCCGATCGAGTTCGATATCGAATTCCTTCAAACGACGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGCGTTCCGAAACTGCAATCGCGTTC
GAGCCCTAGCGCAAGCTTGTGCGAGAGGTCGATGTTGAAATTGCCATCGCCGCCGTGCCGGTCGGAGAGTGCTAGGTTGCCCGGCGACTGCAGCGCGGCGATCCCCTATC
ATCCTCCGCGTTGCATGGCGGAGAGTGAGAGGATCGCTAAGGATTATCTGTGGCTTGAAGCTTGTTCAAGCGACTATGCATCGTATTTCGGGTGCTGTAAATGGGATGGT
TTGAAGGAGAGGGATCCTTTCGTTGAAGCCTACAAGAAATGCACCGACGGCCCGTCGATGAGCCGTCGGACGATCAGTGGCGGTTCTGCTACAAGTGGTGTTAAACGTCC
CAGTATCAGAAGAAGAGTTCTTTTTTCTCTCTCACGTAAGTGCTTTGTGCTACGATTCATTCGTACAAGTACTTTTTCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATTCTCGGCCGATCGAGTTCGATATCGAATTCCTTCAAACGACGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGCGTTCCGAAACTGCAATCGCGTTC
GAGCCCTAGCGCAAGCTTGTGCGAGAGGTCGATGTTGAAATTGCCATCGCCGCCGTGCCGGTCGGAGAGTGCTAGGTTGCCCGGCGACTGCAGCGCGGCGATCCCCTATC
ATCCTCCGCGTTGCATGGCGGAGAGTGAGAGGATCGCTAAGGATTATCTGTGGCTTGAAGCTTGTTCAAGCGACTATGCATCGTATTTCGGGTGCTGTAAATGGGATGGT
TTGAAGGAGAGGGATCCTTTCGTTGAAGCCTACAAGAAATGCACCGACGGCCCGTCGATGAGCCGTCGGACGATCAGTGGCGGTTCTGCTACAAGTGGTGTTAAACGTCC
CAGTATCAGAAGAAGAGTTCTTTTTTCTCTCTCACGTAAGTGCTTTGTGCTACGATTCATTCGTACAAGTACTTTTTCTAATTAA
Protein sequenceShow/hide protein sequence
MGNSRPIEFDIEFLQTTTNVPFSWEAKPGVPKLQSRSSPSASLCERSMLKLPSPPCRSESARLPGDCSAAIPYHPPRCMAESERIAKDYLWLEACSSDYASYFGCCKWDG
LKERDPFVEAYKKCTDGPSMSRRTISGGSATSGVKRPSIRRRVLFSLSRKCFVLRFIRTSTFSN