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Lag0037073 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037073
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr2:3202899..3203522
RNA-Seq ExpressionLag0037073
SyntenyLag0037073
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7018987.1 unnamed protein product [Microthlaspi erraticum]8.5e-0429.41Show/hide
Query:  KQTHIFGRFLE---RKENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAE
        KQ H+F   +    +K   GGMGW L D +GS +  G    +   +  + EA A+   L+  L L      +++ SD L+L+  VI     L E+     
Subjt:  KQTHIFGRFLE---RKENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAE

Query:  AIRVLDKDQGVLQFKHCPRSQNHAENVIARASVGLI
         I  L      + F + PRS+N   + IA+++  LI
Subjt:  AIRVLDKDQGVLQFKHCPRSQNHAENVIARASVGLI

XP_018852850.1 uncharacterized protein LOC109014810 [Juglans regia]5.3e-0635.96Show/hide
Query:  ENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAEAIRVLDKDQGVLQFKH
        +NK G+G  LRD  G L  A S+  +E   + I+EA A+  GL F L++  +   +E+ESDC  LV  V +E  +   ++     IR L K  G  +F+H
Subjt:  ENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAEAIRVLDKDQGVLQFKH

Query:  CPRSQNHAENVIAR
        C R  N  E+ +A+
Subjt:  CPRSQNHAENVIAR

XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]2.0e-0537.86Show/hide
Query:  GMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDAT-LSELKVCAEAIRVLDKDQGVLQFKHCPR
        G+GW   D    +  AG K V     +NILEA A+  GL    S+      I VESDCLE V N++++D   LSE+  C+E  +    + GV+ F H  R
Subjt:  GMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDAT-LSELKVCAEAIRVLDKDQGVLQFKHCPR

Query:  SQN
         +N
Subjt:  SQN

XP_042985441.1 uncharacterized protein LOC122314103 [Carya illinoinensis]4.5e-0533.33Show/hide
Query:  ENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAEAIRVLDKDQGVLQFKH
        + K G+G  LRD  G ++ A SK+ KE  +   +EA AM  GLHF          + +ESDCL LV++++ E    +EL V  + IR +      ++  H
Subjt:  ENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAEAIRVLDKDQGVLQFKH

Query:  CPRSQNHAENVIAR
          R  N A + +A+
Subjt:  CPRSQNHAENVIAR

TrEMBL top hitse value%identityAlignment
A0A2I4H9M5 uncharacterized protein LOC1090148102.6e-0635.96Show/hide
Query:  ENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAEAIRVLDKDQGVLQFKH
        +NK G+G  LRD  G L  A S+  +E   + I+EA A+  GL F L++  +   +E+ESDC  LV  V +E  +   ++     IR L K  G  +F+H
Subjt:  ENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAEAIRVLDKDQGVLQFKH

Query:  CPRSQNHAENVIAR
        C R  N  E+ +A+
Subjt:  CPRSQNHAENVIAR

A0A6D2I187 RNase H domain-containing protein4.1e-0429.41Show/hide
Query:  KQTHIFGRFLE---RKENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAE
        KQ H+F   +    +K   GGMGW L D +GS +  G    +   +  + EA A+   L+  L L      +++ SD L+L+  VI     L E+     
Subjt:  KQTHIFGRFLE---RKENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWEGLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAE

Query:  AIRVLDKDQGVLQFKHCPRSQNHAENVIARASVGLI
         I  L      + F + PRS+N   + IA+++  LI
Subjt:  AIRVLDKDQGVLQFKHCPRSQNHAENVIARASVGLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAAACTAGCATATTCAATATTTCACCTCGTACTATGGGAAAGCACATGTCATGTCAAGCCTAGTACGTTTATCTCACCTTACATTAAGGTATGGATGACCCCAAT
TGGTCCTATGGCTTTATCTTGTGTTTTTGCATTGATATGCATACATTATGTACACAAAAAACAAACTCACATCTTCGGACGCTTCTTGGAACGCAAGGAGAACAAGGGAG
GCATGGGTTGGACCCTGCGTGACTTCAGCGGGTCTCTCATCTGTGCAGGATCGAAAGTGGTTAAGGAGCAATGGACGATTAATATCCTTGAAGCAAAGGCGATGTGGGAA
GGTTTGCATTTCACCCTTTCTCTACCTGATAAACCTCCGATGATTGAGGTTGAATCTGATTGCCTAGAGCTCGTCTCCAATGTGATCGATGAAGATGCTACCCTATCTGA
ACTGAAGGTGTGCGCAGAAGCCATTCGTGTTTTGGATAAAGATCAGGGCGTGCTTCAATTCAAGCACTGTCCTCGATCGCAGAACCACGCGGAAAATGTCATTGCTAGAG
CAAGTGTTGGCTTGATCCGTCGTCGGGAGTTTTTTTGTTTTCGTTCAGGGGTCTCCTTCTGTACTAGAAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAAAACTAGCATATTCAATATTTCACCTCGTACTATGGGAAAGCACATGTCATGTCAAGCCTAGTACGTTTATCTCACCTTACATTAAGGTATGGATGACCCCAAT
TGGTCCTATGGCTTTATCTTGTGTTTTTGCATTGATATGCATACATTATGTACACAAAAAACAAACTCACATCTTCGGACGCTTCTTGGAACGCAAGGAGAACAAGGGAG
GCATGGGTTGGACCCTGCGTGACTTCAGCGGGTCTCTCATCTGTGCAGGATCGAAAGTGGTTAAGGAGCAATGGACGATTAATATCCTTGAAGCAAAGGCGATGTGGGAA
GGTTTGCATTTCACCCTTTCTCTACCTGATAAACCTCCGATGATTGAGGTTGAATCTGATTGCCTAGAGCTCGTCTCCAATGTGATCGATGAAGATGCTACCCTATCTGA
ACTGAAGGTGTGCGCAGAAGCCATTCGTGTTTTGGATAAAGATCAGGGCGTGCTTCAATTCAAGCACTGTCCTCGATCGCAGAACCACGCGGAAAATGTCATTGCTAGAG
CAAGTGTTGGCTTGATCCGTCGTCGGGAGTTTTTTTGTTTTCGTTCAGGGGTCTCCTTCTGTACTAGAAGGTAG
Protein sequenceShow/hide protein sequence
MLKLAYSIFHLVLWESTCHVKPSTFISPYIKVWMTPIGPMALSCVFALICIHYVHKKQTHIFGRFLERKENKGGMGWTLRDFSGSLICAGSKVVKEQWTINILEAKAMWE
GLHFTLSLPDKPPMIEVESDCLELVSNVIDEDATLSELKVCAEAIRVLDKDQGVLQFKHCPRSQNHAENVIARASVGLIRRREFFCFRSGVSFCTRR