CuGenDBv2

Gene ID	Lag0037181
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DNA-directed RNA polymerase subunit beta
Genome location	chr2:4033474..4045036
RNA-Seq Expression	Lag0037181
Synteny	Lag0037181
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0008652 - cellular amino acid biosynthetic process (biological process) GO:0009073 - aromatic amino acid family biosynthetic process (biological process) GO:0046417 - chorismate metabolic process (biological process) GO:0005665 - RNA polymerase II, core complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0032549 - ribonucleoside binding (molecular function) GO:0004106 - chorismate mutase activity (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR007641 - RNA polymerase Rpb2, domain 7 IPR037039 - Chorismate mutase, AroQ class superfamily, eukaryotic IPR037034 - RNA polymerase Rpb2, domain 2 superfamily IPR037033 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily IPR036263 - Chorismate mutase type II superfamily IPR015712 - DNA-directed RNA polymerase, subunit 2 IPR014724 - RNA polymerase Rpb2, OB-fold IPR008238 - Chorismate mutase, AroQ class, eukaryotic type IPR007647 - RNA polymerase Rpb2, domain 5 IPR007646 - RNA polymerase Rpb2, domain 4 IPR007645 - RNA polymerase Rpb2, domain 3 IPR007644 - RNA polymerase, beta subunit, protrusion IPR007642 - RNA polymerase Rpb2, domain 2 IPR007121 - RNA polymerase, beta subunit, conserved site IPR007120 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7037651.1 DNA-directed RNA polymerases IV and V subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]

0.0e+00

95.47

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Query:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK
        MGTSG KDD+EMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGE FLKDFCKKSSM+FFNEYGLISHQ+NSYNDFIKSG+QK+FDYFGEIVVQPGYDPSKK
Subjt:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK

Query:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS
        GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQ+LV SDKFKTG+DQYVDKDL+SQDNRD+FIGRLPVMVNS
Subjt:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS

Query:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
        DLCWMK++Q+RDCEFD GGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
Subjt:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL

Query:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT
        GVSSDREIVDLID+GR+DPTVLNILFASVR VDNDDKWKDFRR KRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLK LKQKCRFLGYMVKCLLQAYT
Subjt:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT

Query:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
        GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
Subjt:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL

Query:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC
        QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC++STPDGENCGLIKNLSITGLVSLNTLKP+VPTLFRCGMEN+VDDTSTSLSGKH+IFLNGEWVGVC
Subjt:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC

Query:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG
        EDSLSFVTK+RRKRRRN LLHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLNRIDKSKGE+YTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT+D+G
Subjt:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG

Query:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
        T KY+HCELD SFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
Subjt:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG

Query:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
        QNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
Subjt:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG

Query:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
        ADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Subjt:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG

Query:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
        IASGGS+KYATP+STPS+D I DQLHRAGF+R GSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Subjt:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME

Query:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Subjt:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

XP_022940261.1 DNA-directed RNA polymerases IV and V subunit 2-like [Cucurbita moschata]

0.0e+00

95.56

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Query:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK
        MGTSG KDD+EMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGE FLKDFCKKSSM+FFNEYGLISHQ+NSYNDFIKSG+QK+FDYFGEIVVQPGYDPSKK
Subjt:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK

Query:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS
        GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQ+LV SDKFKTG+DQYVDKDL+SQDNRD+FIGRLPVMVNS
Subjt:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS

Query:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
        DLCWMK++Q+RDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
Subjt:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL

Query:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT
        GVSSDREIVDLID+GR+DPTVLNILFASVR VDNDDKWKDFRR KRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLK LKQKCRFLGYMVKCLLQAYT
Subjt:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT

Query:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
        GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
Subjt:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL

Query:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC
        QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC++STPDGENCGLIKNLSITGLVSLNTLKP+VPTLFRCGMEN+VDDTSTSLSGKH+IFLNGEWVGVC
Subjt:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC

Query:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG
        EDSLSFVTK+RRKRRRN LLHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLNRIDKSKGE+YTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT+D+G
Subjt:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG

Query:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
        T KY+HCELD SFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
Subjt:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG

Query:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
        QNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
Subjt:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG

Query:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
        ADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Subjt:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG

Query:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
        IASGGS+KYATP+STPS+D I DQLHRAGF+R GSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Subjt:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME

Query:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Subjt:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

XP_022981836.1 DNA-directed RNA polymerases IV and V subunit 2-like [Cucurbita maxima]

0.0e+00

95.39

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Query:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK
        MGTSG KDD+EMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGE FLKDFCKKSSM+FF+EYGLISHQ+NSYNDFIKSG+QK+FDYFGEIVVQPGYDPSKK
Subjt:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK

Query:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS
        GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYN+LPRHARLQNMTYSSRMKMNINVEVYTQ+LV SDKFKTG+DQYVDKDL+SQDNRD+FIGRLPVMVNS
Subjt:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS

Query:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
        DLCWMK++Q+RDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
Subjt:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL

Query:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT
        GVSSDREIVDLID+GR+DPTVLNILFASVR VDNDDKWKDFRR KRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLK LKQKCRFLGYMVKCLLQAYT
Subjt:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT

Query:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
        GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
Subjt:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL

Query:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC
        QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC++STPDGENCGLIKNLSITGLVSLNTLKP+VPTLFRCGMEN+VDDTSTSLSGKHKIFLNGEWVGVC
Subjt:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC

Query:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG
        EDSLSFVTK+R KRRRN LLHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLNRIDKSKGE+YTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT+D+G
Subjt:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG

Query:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
        T KY+HCELD SFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
Subjt:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG

Query:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
        QNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
Subjt:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG

Query:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
        ADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Subjt:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG

Query:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
        IASGGS+KYATP+STPS+D I DQLHRAGF+R GSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Subjt:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME

Query:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Subjt:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

XP_023524029.1 DNA-directed RNA polymerases IV and V subunit 2-like [Cucurbita pepo subsp. pepo]

0.0e+00

95.56

Show/hide

Query:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK
        MGTSG KDD+EMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGE FLKDFCKKSSM+FFNEYGLISHQ+NSYNDFIKSG+QK+FDYFGEIVVQPGYDPSKK
Subjt:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK

Query:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS
        GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQ+LV SDKFKTG+DQYVDKDL+SQDNRD+FIGRLPVMVNS
Subjt:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS

Query:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
        DLCWMK++Q+RDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
Subjt:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL

Query:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT
        GVSSDREIVDLID+GR+DPTVLNILFASVR VDNDDKWKDFRR KRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLK LKQKCRFLGYMVKCLLQAYT
Subjt:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT

Query:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
        GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
Subjt:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL

Query:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC
        QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC++STPDGENCGLIKNLSITGLVSLNTLKP+VPTLFRCGMEN+VDDTSTSLSGKH+IFLNGEWVGVC
Subjt:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC

Query:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG
        EDSLSFVTK+RRKRRRN LLHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLNRIDKSKGE+YTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT+D+G
Subjt:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG

Query:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
        T KY+HCELD SFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
Subjt:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG

Query:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
        QNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
Subjt:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG

Query:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
        ADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Subjt:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG

Query:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
        IASGGS+KYATP+STPS+D I DQLHRAGF+R GSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Subjt:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME

Query:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Subjt:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

XP_038897771.1 DNA-directed RNA polymerases IV and V subunit 2-like [Benincasa hispida]

0.0e+00

95.73

Show/hide

Query:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDD-YSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSK
        MGTSG KDD+EMNSE EDLSPGTDMDTDDDD YSEPVNI DLGEAFLKDFCKKSSM+FFN+YGLISHQINSYNDFIKSG+QKAFDYFGEI+VQPGYDPSK
Subjt:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDD-YSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSK

Query:  KGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVN
        KGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMK+NI++EVYTQ+LVSSDKFKTGKD+YVDK+ V +DNRDVFIGRLPVMVN
Subjt:  KGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVN

Query:  SDLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
        SDLCWMKEEQ+RDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTE+PVWILFFA
Subjt:  SDLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA

Query:  LGVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAY
        LGVSSD+EIVDLIDYGRDDP+VLNILFASVREVDNDDKWKDFRR KRALNFLDNE++KTSFPPAEKIEDCLNLYLFASLK LKQKCRFLGYMVKCLLQAY
Subjt:  LGVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAY

Query:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANP
        TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANP
Subjt:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANP

Query:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGV
        LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC+ISTPDGENCGLIKNLS+TGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGK+KIFL+GEWVGV
Subjt:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGV

Query:  CEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDE
        CEDSLSFVTK+RRKRRRNPLLHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLD+GIIELIGTEEEEDCRTAWSIKHL +DE
Subjt:  CEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDE

Query:  GTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
        GT KYSHCELD+SFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
Subjt:  GTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN

Query:  GQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
        GQNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD+DGFPYIGANLQSGDIVIGRCAES
Subjt:  GQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES

Query:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
        GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
Subjt:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK

Query:  GIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM
        GIASGGS+KYATP+STPS+D I +QLHRAGF+R GSERVYNGRTGEMM+SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM
Subjt:  GIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM

Query:  ERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        ERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQLC
Subjt:  ERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BUT1 DNA-directed RNA polymerase subunit beta

0.0e+00

93.65

Show/hide

Query:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDD--YSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPS
        MGTSG KDD+EMNSE EDLSPG D+DTDDDD  YSEPVNI+DLGEAFLKDFCKKSSM+FFN+YGLISHQINSYNDFIK+G+QKAFD+FG+I+VQPGYDPS
Subjt:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDD--YSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPS

Query:  KKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLV--SQDNRDVFIGRLPV
        KKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMK+NI++E+YTQKLVSSDKFKTGKDQYVDK+ V  + DNRDVFIGRLPV
Subjt:  KKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLV--SQDNRDVFIGRLPV

Query:  MVNSDLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWIL
        MVNSDLCWMK+EQ+RDCEFD GGYFLIKGAEKIFIAQEQICLRRLWISN+QGWTVAYRSEVKRNRLIIRLVENSKSE+LKSKEKVLNVYFLSTE+PVWIL
Subjt:  MVNSDLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWIL

Query:  FFALGVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLL
        FFALGVSSD+EIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRR KRAL FLDNEI+KTSFPPAEKIEDCLNLYLFASLK LKQKC FLGYMVKCLL
Subjt:  FFALGVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLL

Query:  QAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGR
        QAYTGRRKCDNRDDFRNKRFELA ELLERE+KVHIAHARRRMEKALQRDLYGDR VRPIEHYLDASIITNGLSRAFSTGAWAH+FKRMERISGVVATLGR
Subjt:  QAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGR

Query:  ANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEW
        ANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC++STPDGENCGLIKNLS TGLVSLNT KPI+PTLF CGMENL D+TSTSL GK++IFL+GEW
Subjt:  ANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEW

Query:  VGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT
        VGVCEDSLSFVTK+RRKRRRNP LHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIEL+GTEEEEDCR AWSIKHL 
Subjt:  VGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT

Query:  DDEGTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPE
        +DEGT KYSHCELD+SFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPE
Subjt:  DDEGTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPE

Query:  FYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRC
        FYNGQNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDD INFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRC
Subjt:  FYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRC

Query:  AESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAA
        AESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAA
Subjt:  AESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAA

Query:  LGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF
        LGKGIA+GGS+KYATP+STPS+D I DQLHRAGF+R GSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF
Subjt:  LGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF

Query:  GEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        GEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQLC
Subjt:  GEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

A0A5D3D8Y5 DNA-directed RNA polymerase subunit beta

0.0e+00

93.65

Show/hide

Query:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDD--YSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPS
        MGTSG KDD+EMNSE EDLSPG D+DTDDDD  YSEPVNI+DLGEAFLKDFCKKSSM+FFN+YGLISHQINSYNDFIK+G+QKAFD+FG+I+VQPGYDPS
Subjt:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDD--YSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPS

Query:  KKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLV--SQDNRDVFIGRLPV
        KKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMK+NI++E+YTQKLVSSDKFKTGKDQYVDK+ V  + DNRDVFIGRLPV
Subjt:  KKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLV--SQDNRDVFIGRLPV

Query:  MVNSDLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWIL
        MVNSDLCWMK+EQ+RDCEFD GGYFLIKGAEKIFIAQEQICLRRLWISN+QGWTVAYRSEVKRNRLIIRLVENSKSE+LKSKEKVLNVYFLSTE+PVWIL
Subjt:  MVNSDLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWIL

Query:  FFALGVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLL
        FFALGVSSD+EIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRR KRAL FLDNEI+KTSFPPAEKIEDCLNLYLFASLK LKQKC FLGYMVKCLL
Subjt:  FFALGVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLL

Query:  QAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGR
        QAYTGRRKCDNRDDFRNKRFELA ELLERE+KVHIAHARRRMEKALQRDLYGDR VRPIEHYLDASIITNGLSRAFSTGAWAH+FKRMERISGVVATLGR
Subjt:  QAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGR

Query:  ANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEW
        ANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC++STPDGENCGLIKNLS TGLVSLNT KPI+PTLF CGMENL D+TSTSL GK++IFL+GEW
Subjt:  ANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEW

Query:  VGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT
        VGVCEDSLSFVTK+RRKRRRNP LHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIEL+GTEEEEDCR AWSIKHL 
Subjt:  VGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT

Query:  DDEGTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPE
        +DEGT KYSHCELD+SFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPE
Subjt:  DDEGTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPE

Query:  FYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRC
        FYNGQNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDD INFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRC
Subjt:  FYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRC

Query:  AESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAA
        AESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAA
Subjt:  AESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAA

Query:  LGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF
        LGKGIA+GGS+KYATP+STPS+D I DQLHRAGF+R GSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF
Subjt:  LGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF

Query:  GEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        GEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQLC
Subjt:  GEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

A0A6J1C950 DNA-directed RNA polymerase subunit beta

0.0e+00

94.05

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Query:  MGT-SGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSK
        MGT SG KDD+EMNSE E  SPGTDMDTDDDDYSE VNI ++GE FLKDFCKK+SM+FFNEYGLISHQINSYNDFI+SGLQKAFDYFGEIVVQPGYDPSK
Subjt:  MGT-SGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSK

Query:  KGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVN
        KGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQ+LV SDKFKTGKDQYVDKDL+SQDNR++FIGRLPVMVN
Subjt:  KGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVN

Query:  SDLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
        SDLCWMKEEQ+RDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Subjt:  SDLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA

Query:  LGVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAY
        LGVSSD+E+VDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRR K+ALN+LDNEIKKTSFPP EKIEDCLNLYLFASLK LKQKCRFLGYMVKC+LQAY
Subjt:  LGVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAY

Query:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANP
        TGRRK DNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDR+VRPIEHYLDASIITNGLSRAFSTGAWAH FKRMERISGVVATLGRANP
Subjt:  TGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANP

Query:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGV
        LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC++STPDGENCGLIKN+SITGLVSLNTLKPIVPTLFRCGMENLVDDT T LSG +KIFLNGEWVG+
Subjt:  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGV

Query:  CEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDE
        C DS+SFVTKLRRKRRRN  LHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLN+IDKSKGEN TFQSLLDKGIIELIGTEEEEDCRTAW IK+L ++E
Subjt:  CEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDE

Query:  GTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN
        GT KYSHCELD+SFLLGLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM ADCLGTPGYLSSH+GI P+PEFYN
Subjt:  GTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYN

Query:  GQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
        GQNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEHIRSYKA+VDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
Subjt:  GQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES

Query:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
        GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK
Subjt:  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK

Query:  GIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM
        GIA+GGS+KYATP+STPS+D I DQLHRAGF+R GSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM
Subjt:  GIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM

Query:  ERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        ERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQLC
Subjt:  ERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

A0A6J1FHZ2 DNA-directed RNA polymerase subunit beta

0.0e+00

95.56

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Query:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK
        MGTSG KDD+EMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGE FLKDFCKKSSM+FFNEYGLISHQ+NSYNDFIKSG+QK+FDYFGEIVVQPGYDPSKK
Subjt:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK

Query:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS
        GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQ+LV SDKFKTG+DQYVDKDL+SQDNRD+FIGRLPVMVNS
Subjt:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS

Query:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
        DLCWMK++Q+RDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
Subjt:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL

Query:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT
        GVSSDREIVDLID+GR+DPTVLNILFASVR VDNDDKWKDFRR KRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLK LKQKCRFLGYMVKCLLQAYT
Subjt:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT

Query:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
        GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
Subjt:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL

Query:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC
        QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC++STPDGENCGLIKNLSITGLVSLNTLKP+VPTLFRCGMEN+VDDTSTSLSGKH+IFLNGEWVGVC
Subjt:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC

Query:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG
        EDSLSFVTK+RRKRRRN LLHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLNRIDKSKGE+YTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT+D+G
Subjt:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG

Query:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
        T KY+HCELD SFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
Subjt:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG

Query:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
        QNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
Subjt:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG

Query:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
        ADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Subjt:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG

Query:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
        IASGGS+KYATP+STPS+D I DQLHRAGF+R GSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Subjt:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME

Query:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Subjt:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

A0A6J1IXN3 DNA-directed RNA polymerase subunit beta

0.0e+00

95.39

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Query:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK
        MGTSG KDD+EMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGE FLKDFCKKSSM+FF+EYGLISHQ+NSYNDFIKSG+QK+FDYFGEIVVQPGYDPSKK
Subjt:  MGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKK

Query:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS
        GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYN+LPRHARLQNMTYSSRMKMNINVEVYTQ+LV SDKFKTG+DQYVDKDL+SQDNRD+FIGRLPVMVNS
Subjt:  GDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNS

Query:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
        DLCWMK++Q+RDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL
Subjt:  DLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFAL

Query:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT
        GVSSDREIVDLID+GR+DPTVLNILFASVR VDNDDKWKDFRR KRALNFL+NE+KKTSFPPAEKIEDCLNLYLFASLK LKQKCRFLGYMVKCLLQAYT
Subjt:  GVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT

Query:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
        GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHY DASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
Subjt:  GRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL

Query:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC
        QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC++STPDGENCGLIKNLSITGLVSLNTLKP+VPTLFRCGMEN+VDDTSTSLSGKHKIFLNGEWVGVC
Subjt:  QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVC

Query:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG
        EDSLSFVTK+R KRRRN LLHQVEVKRDE LKEVRIFSDAGRILRPLLVVENLNRIDKSKGE+YTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT+D+G
Subjt:  EDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEG

Query:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
        T KY+HCELD SFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG
Subjt:  TVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNG

Query:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
        QNAIV+VNVH GYNQEDSLVMNRASLERGMFRSEH RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG
Subjt:  QNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESG

Query:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
        ADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG
Subjt:  ADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKG

Query:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
        IASGGS+KYATP+STPS+D I DQLHRAGF+R GSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Subjt:  IASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME

Query:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VIQRSVAGGRKIRGPYCRVCESVD+IVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Subjt:  RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

SwissProt top hits

e value

%identity

Alignment

P38420 DNA-directed RNA polymerase II subunit 2

1.1e-192

34.98

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Query:  SFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMN
        ++F E GL+  Q++S+++FI++ +Q+  D   +I ++P   ++P  + D       + FG++ L KP      + G+   + P+ ARL+N+TYS+ + ++
Subjt:  SFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMN

Query:  INVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SNI
        +   V           K G D   ++   +QD   VFIG++P+M+ S  C + +   +D      C +D GGYF+I G+EK+ IAQE++    +++    
Subjt:  INVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SNI

Query:  QGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDPTVLNILFASVRE---VD
        Q    AY  EV+     +NR    + +R++  + ++   S + +   + ++ TEIP+ I+F ALG  +D++I++ I Y   D  ++ +L  S+ E   + 
Subjt:  QGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDPTVLNILFASVRE---VD

Query:  NDDKWKDF----------RRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELL
        N     D+           ++KR + +  + ++K   P     E C             +K  + GY++  LL    GRR  D+RD + NKR +LAG LL
Subjt:  NDDKWKDF----------RRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELL

Query:  EREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDAR
            ++      R +   +Q+ +   ++V  ++  + A  IT+GL  + +TG W  +     R +GV   L R     T++ LRR    +   GK+   R
Subjt:  EREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDAR

Query:  YPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLK-PIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNPLLHQ
          H S WG +C   TP+G+ CGL+KNL++   +++ +   PI+  L   G EN  + + + +    KIF+NG WVGV  D    V  LRR RRR  +  +
Subjt:  YPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLK-PIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNPLLHQ

Query:  VEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSK----------GENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT------DDEGTVKYSH
        V V RD  LKE+RI++D GR  RPL +V+N   + K +           E   +  L+ KG IE I TEEEE    + +I  L       ++  T  Y+H
Subjt:  VEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSK----------GENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT------DDEGTVKYSH

Query:  CELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVS
        CE+  S +LG+   ++PF +H+ + R  +QS     QA+G   TN  FR+DTL++ L+YPQ+PL  T   + L        H   LP      G NAIV+
Subjt:  CELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVS

Query:  VNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQS-KIGRVDSLDDDGFPYIGANLQSGDIVIGRCAE-------
        ++ + GYNQEDS++MN++S++RG FRS   RSY+ E   K+     ++     + G T   + G  D LDDDG    G  +   D++IG+          
Subjt:  VNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQS-KIGRVDSLDDDGFPYIGANLQSGDIVIGRCAE-------

Query:  ------SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQL
              +  DHSI L+H+E GMV +V+L++N DG  +  V +R VR P +GDKFSS HGQKG +G   +QE+ P+TI+G+ PDI++NPHA PSR T GQL
Subjt:  ------SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQL

Query:  LEAALGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFG
        +E  +GK  A  G    ATP++  ++D+I   LH+ G+   G ER+YNG TG  + ++IF+GPT+YQRL HM +DK+  R  GPV  LTRQP   R R G
Subjt:  LEAALGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFG

Query:  GIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGI
        G++FGEMERDC+IAHGA+  L ERLF  SD+ ++HVC+ C  +A           K     CR C++  +IV+V +PY  KLL QEL SM I
Subjt:  GIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGI

Q42877 DNA-directed RNA polymerase II subunit RPB2

2.9e-193

34.43

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Query:  DDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGA
        +D+Y    N+ D  E   ++       ++F E GL+  Q++S+++FI++ +Q+  D   +I ++P   ++P  + D       + FG++ L KP      
Subjt:  DDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGA

Query:  ASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRD------CEFDHGGY
        + G+   + P+ ARL+N+TYS+ + +++   V           K G D   ++   +QD   VFIG++P+M+ S  C + +   +D      C  D GGY
Subjt:  ASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRD------CEFDHGGY

Query:  FLIKGAEKIFIAQEQICLRRLWI-SNIQGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREIV
        F+I G+EK+ IAQE++    +++    Q    A+ +EV+     +NR    + +R++  + ++   S + +   + ++ TEIP+ I+F ALG  +D++I+
Subjt:  FLIKGAEKIFIAQEQICLRRLWI-SNIQGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREIV

Query:  DLIDYGRDDPTVLNILFASVRE---VDNDDKWKDF----------RRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLL
        + I Y  +D  ++ +L  S+ E   + N     D+           R+KR + +    ++K   P     E C             +K  + GY++  LL
Subjt:  DLIDYGRDDPTVLNILFASVRE---VDNDDKWKDF----------RRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLL

Query:  QAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGR
            GRR  D+RD + NKR +LAG LL    ++      R +   +Q+ +   +DV  ++  + A  IT+GL  + +TG W  +     R +GV   L R
Subjt:  QAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGR

Query:  ANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLK-PIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGE
             T++ LRR    +   GK+   R  H S WG +C   TP+G+ CGL+KNL++   +++ +   PI+  L   G EN  + +   +    KIF+NG 
Subjt:  ANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLK-PIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGE

Query:  WVGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKG----------ENYTFQSLLDKGIIELIGTEEEED
        WVG+  D    V  LRR RRR  +  +V V RD  LKE+RI++D GR  RPL +VE    + K K           +   +  L+ KG IE I TEEEE 
Subjt:  WVGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKG----------ENYTFQSLLDKGIIELIGTEEEED

Query:  CRTAWSIKHLTD------DEGTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCL
           + +I  L        D  +  Y+HCE+  S +LG+   ++PF +H+ + R  +QS     QA+G   TN  FR+DTL++ L+YPQ+PL  T   + L
Subjt:  CRTAWSIKHLTD------DEGTVKYSHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCL

Query:  GTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKES--SEKRRKSDDAINFGKTQSKIGRVDSLDDD
                H   LP      G NAIV+++ + GYNQEDS++MN++S++RG FRS   RSY+ E     +   E   + D A   G    + G  D LDDD
Subjt:  GTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKES--SEKRRKSDDAINFGKTQSKIGRVDSLDDD

Query:  GFPYIGANLQSGDIVIGRCAE-------------SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQEN
        G    G  +   D++IG+                +  DHS  L+H+E GMV +V+L++N DG  +  V +R VR P +GDKFSS HGQKG +G   +QE+
Subjt:  GFPYIGANLQSGDIVIGRCAE-------------SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQEN

Query:  FPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHM
         P+T++GI PDI++NPHA PSR T GQL+E  +GK  A  G    ATP++  ++D+I   LH+ G+   G E +YNG TG  + ++IF+GPT+YQRL HM
Subjt:  FPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHM

Query:  AEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIV
         +DK+  R  GPV  LTRQP   R R GG++FGEMERDC+IAHGA+  L ERLF  SD+ ++HVC++C  +A           K     CR C++  +IV
Subjt:  AEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIV

Query:  RVNVPYGAKLLCQELFSMGI
        +V++PY  KLL QEL +M I
Subjt:  RVNVPYGAKLLCQELFSMGI

Q54J75 DNA-directed RNA polymerase II subunit rpb2

5.6e-181

34.03

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Query:  SFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYA------SVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSR
        ++F E GL+  Q++S+++FI++ +Q+  D    I ++P    S+   G+   +      SVKFG++ L KP        G    + P  AR++N+TYS+ 
Subjt:  SFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYA------SVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSR

Query:  MKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI
        + ++I     T+ +++  K K G ++  D+ L     + +FIG++P+M+ S  C + E   RD      C FD GGYF+I G+EK+ IAQE++    +++
Subjt:  MKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI

Query:  -SNIQGWTVAYRSEVK---------RNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDPTVLNILFASVRE--
                 +Y +E++          + + ++++ N+    +  K     V ++  ++PV I+F ALG  +D++I++ I Y   D  +++++  S+ E  
Subjt:  -SNIQGWTVAYRSEVK---------RNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDPTVLNILFASVRE--

Query:  -VDNDDKWKDF---------RRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGE
         + + +   D+          R++R + F    ++K   P     E       F   K    K  + GY+   LL A   RR  D+RD F NKR +LAG 
Subjt:  -VDNDDKWKDF---------RRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGE

Query:  LLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGD
        LL    +       + +   LQR +  D++       + +  IT+GL  + +TG W  S K     SGV   L R     T++ LRR    +   GK+  
Subjt:  LLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGD

Query:  ARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTL-KPIVPTLFRCGMENL--VDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNP
         R  H +HWG VC   TP+G+ CGL+KNL++   +S+ +  +PI+  L     ENL  + D S+  S   KIF+NG WVG+       ++ LR  RR   
Subjt:  ARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTL-KPIVPTLFRCGMENL--VDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNP

Query:  LLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSK--------GENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT---DDEGTVKYSHC
        +  +V V RD   KE+R+++D GR  RPL VV++ N++   K         + Y +Q LL +GI+E I  EEEE    A + + L    +++    Y+HC
Subjt:  LLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSK--------GENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT---DDEGTVKYSHC

Query:  ELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSV
        E+  S +LG+ C ++PF +H+ + R  +Q+     QA+G   TN   R+DT++H L YPQ+PL  T + + L        H   LP      GQN  V++
Subjt:  ELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSV

Query:  NVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCA----------
          + GYNQEDS+++N+++++RG+FRS   R+YK E   K++S      +          + G  + +DDDG    G  +   DI+IG+            
Subjt:  NVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCA----------

Query:  -----ESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQL
              +  D S  L+ +E G+V +V+L+++ +G  +  V +R +R P +GDKFSS HGQKG  G    QE+ PFT++GIVPDI++NPHA PSR T GQL
Subjt:  -----ESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQL

Query:  LEAALGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFG
        +E  LGK  AS G    ATP++  +++ I   LH+ G+   G E +YNG TG  M + IF+GPT+YQRL HM +DK+  R+ GPV  LTRQPV  R R G
Subjt:  LEAALGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFG

Query:  GIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQ
        G++FGEMERDC+I+HGA+  L ERLF  SDS ++H+C  C  +A           K     CR C++  +I ++ +PY AKLL QEL SM I  +  TQ
Subjt:  GIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQ

Q9LK40 DNA-directed RNA polymerases IV and V subunit 2

0.0e+00

67.45

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Query:  DMDTDDDDYSE------PVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTL
        DMD D  D  E       +N+ +LGE FL+ FCKK++ SFF++YGLISHQ+NSYN FI+ GLQ  F  FGE++V+P +D  KK D +WRYA+VKFG+VT+
Subjt:  DMDTDDDDYSE------PVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTL

Query:  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEE-----QRRD
        +KP F+   +  KE   LP HARLQNMTYS+R+K+N+ VEV+   +V SDKFKTG+D YV+K ++    +D+ IG +PVMV S LC   E+     ++ D
Subjt:  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEE-----QRRD

Query:  CEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLI
        C FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K +EKVL VYFLSTEIPVW+LFFALGVSSD+E +DLI
Subjt:  CEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLI

Query:  DYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFR
         +  DD ++ N L AS+     D   + FR    AL +++ +IK T FPPAE +++CL+LYLF  L+SLK+K RFLGYMVKCLL +Y G+RKC+NRD FR
Subjt:  DYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFR

Query:  NKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQ
        NKR ELAGELLEREI+VH+AHARR+M +A+Q+ L GD D++PIEHYLDAS+ITNGLSRAFSTGAW+H F++MER+SGVVA LGRANPLQT+ +LRRTRQQ
Subjt:  NKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQ

Query:  VAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRR
        V YTGKVGDARYPHPSHWGRVC++STPDGENCGL+KN+S+ GLVS  +L+ +V  LF CGME L+DDT T L GKHK+ LNG+WVG+C DS SFV +L+ 
Subjt:  VAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRR

Query:  KRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLS
        +RR++ L  ++E+KRD+   EVRIF+DAGR+LRPLLVVENL ++ + K   Y F  LLD GI+ELIG EEEEDC TAW IK L  +     Y+HCELDLS
Subjt:  KRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLS

Query:  FLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQG
        FLLG+SC +VPFANHDH RR L+QSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIV+VNVH G
Subjt:  FLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQG

Query:  YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEK
        YNQEDS+VMN+ASLERGMFRSE IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE+
Subjt:  YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEK

Query:  GMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGSI
        G+VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA      G S 
Subjt:  GMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGSI

Query:  KY------ATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
         Y      ATP+STP + +I +QLHRAGF+R G+ERVYNGR+GEMMRS+IFMGPTFYQRL+HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
Subjt:  KY------ATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER

Query:  DCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        DCLIAHGASANLHERLFTLSDSSQMH+C+KCK  A+VI+R+ + GRKIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Subjt:  DCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

Q9LV32 DNA-directed RNA polymerase D subunit 2b

0.0e+00

65.09

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Query:  MDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPKFWG
        MD D+ + +  +NI +LGE+FL+ FCKK++ SFF E+GLISHQ+NSYN FI+ GLQ  F+ FG+I+V+P +D  KK DG+WRYA+V F K+         
Subjt:  MDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPKFWG

Query:  GAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRDCE-----FDHGG
                                              ++  DKFKTG+D+YV+K+++    +D+ IG +PVMV S LC   E+ + +C+     FD GG
Subjt:  GAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRDCE-----FDHGG

Query:  YFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDP
        YF+IKGAEK+FIAQEQ+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K  EKVL VYFLSTEIPVW+LFFALGVSSD+E +DLI +  DD 
Subjt:  YFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDP

Query:  TVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA
        ++ N L AS+ E   D   + FR    AL +++++IK T FPPAE ++DCL LYLF  L+ LK+K RFLGYMVKCLL AY G+RKC+NRD FRNKR ELA
Subjt:  TVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA

Query:  GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKV
        GELLEREI+VH+AHARR+M +A+Q+ L GD D++PIEHYLDAS+ITNGL+RAFSTGAW+H F++MER+SGVVA LGRANPLQT+ +LRRTRQQV YTGKV
Subjt:  GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKV

Query:  GDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNPL
        GDAR+PHPSHWGRVC++STPDGENCGL+KN+S+ GLVS   L+ +V  LF CGME L++DTST L GKHK+ LNG+WVG+C DS SFV +L+ +RR++ L
Subjt:  GDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNPL

Query:  LHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLSFLLGLSC
          ++E+KRD+   EVRIF+DAGR+LRPLLVVENL+++ + K   Y F+ LLD+GI+ELIG EEEEDC TAW IK L  +     Y+HCELDLSFLLG+SC
Subjt:  LHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLSFLLGLSC

Query:  GLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQGYNQEDSL
         +VPFANHDH +R L+QSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIV+VNVH GYNQEDS+
Subjt:  GLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQGYNQEDSL

Query:  VMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVV
        VMN+ASLERGMFRSE IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE+G+VQKVV
Subjt:  VMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVV

Query:  LSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA------SGGSIKY----
        LSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA       G S  Y    
Subjt:  LSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA------SGGSIKY----

Query:  --ATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH
          ATP+STP + +I +QLHRAGF+R G+ERVYNGR+GEMMRSLIFMGPTFYQRL+HM+E+KVKFRNTGPVHPLTRQPVADRKRFGGI+FGEMERDCLIAH
Subjt:  --ATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH

Query:  GASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        GASANLHERLFTLSDSSQMH+C+KCK  A+VI+R+ + GRKIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Subjt:  GASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

Arabidopsis top hits

e value

%identity

Alignment

AT3G18090.1 nuclear RNA polymerase D2B

0.0e+00

68.63

Show/hide

Query:  RLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRDCE-----FDHGGYFLIKGAEKIFIAQE
        RLQNMTYS+R+K+N  VEV+ + ++  DKFKTG+D+YV+K+++    +D+ IG +PVMV S LC   E+ + +C+     FD GGYF+IKGAEK+FIAQE
Subjt:  RLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRDCE-----FDHGGYFLIKGAEKIFIAQE

Query:  QICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDPTVLNILFASVREVDN
        Q+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K  EKVL VYFLSTEIPVW+LFFALGVSSD+E +DLI +  DD ++ N L AS+ E   
Subjt:  QICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDPTVLNILFASVREVDN

Query:  DDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHA
        D   + FR    AL +++++IK T FPPAE ++DCL LYLF  L+ LK+K RFLGYMVKCLL AY G+RKC+NRD FRNKR ELAGELLEREI+VH+AHA
Subjt:  DDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHA

Query:  RRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC
        RR+M +A+Q+ L GD D++PIEHYLDAS+ITNGL+RAFSTGAW+H F++MER+SGVVA LGRANPLQT+ +LRRTRQQV YTGKVGDAR+PHPSHWGRVC
Subjt:  RRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVC

Query:  YISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEV
        ++STPDGENCGL+KN+S+ GLVS   L+ +V  LF CGME L++DTST L GKHK+ LNG+WVG+C DS SFV +L+ +RR++ L  ++E+KRD+   EV
Subjt:  YISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEV

Query:  RIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLSFLLGLSCGLVPFANHDHARRAL
        RIF+DAGR+LRPLLVVENL+++ + K   Y F+ LLD+GI+ELIG EEEEDC TAW IK L  +     Y+HCELDLSFLLG+SC +VPFANHDH +R L
Subjt:  RIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLSFLLGLSCGLVPFANHDHARRAL

Query:  FQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSE
        +QSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIV+VNVH GYNQEDS+VMN+ASLERGMFRSE
Subjt:  FQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSE

Query:  HIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCL
         IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE+G+VQKVVLSSND+GKN+A V L
Subjt:  HIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCL

Query:  RQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA------SGGSIKY------ATPYSTPSIDDIK
        RQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA       G S  Y      ATP+STP + +I 
Subjt:  RQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA------SGGSIKY------ATPYSTPSIDDIK

Query:  DQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD
        +QLHRAGF+R G+ERVYNGR+GEMMRSLIFMGPTFYQRL+HM+E+KVKFRNTGPVHPLTRQPVADRKRFGGI+FGEMERDCLIAHGASANLHERLFTLSD
Subjt:  DQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD

Query:  SSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        SSQMH+C+KCK  A+VI+R+ + GRKIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Subjt:  SSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

AT3G23780.1 nuclear RNA polymerase D2A

0.0e+00

67.45

Show/hide

Query:  DMDTDDDDYSE------PVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTL
        DMD D  D  E       +N+ +LGE FL+ FCKK++ SFF++YGLISHQ+NSYN FI+ GLQ  F  FGE++V+P +D  KK D +WRYA+VKFG+VT+
Subjt:  DMDTDDDDYSE------PVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTL

Query:  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEE-----QRRD
        +KP F+   +  KE   LP HARLQNMTYS+R+K+N+ VEV+   +V SDKFKTG+D YV+K ++    +D+ IG +PVMV S LC   E+     ++ D
Subjt:  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEE-----QRRD

Query:  CEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLI
        C FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K +EKVL VYFLSTEIPVW+LFFALGVSSD+E +DLI
Subjt:  CEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLI

Query:  DYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFR
         +  DD ++ N L AS+     D   + FR    AL +++ +IK T FPPAE +++CL+LYLF  L+SLK+K RFLGYMVKCLL +Y G+RKC+NRD FR
Subjt:  DYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFR

Query:  NKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQ
        NKR ELAGELLEREI+VH+AHARR+M +A+Q+ L GD D++PIEHYLDAS+ITNGLSRAFSTGAW+H F++MER+SGVVA LGRANPLQT+ +LRRTRQQ
Subjt:  NKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQ

Query:  VAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRR
        V YTGKVGDARYPHPSHWGRVC++STPDGENCGL+KN+S+ GLVS  +L+ +V  LF CGME L+DDT T L GKHK+ LNG+WVG+C DS SFV +L+ 
Subjt:  VAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRR

Query:  KRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLS
        +RR++ L  ++E+KRD+   EVRIF+DAGR+LRPLLVVENL ++ + K   Y F  LLD GI+ELIG EEEEDC TAW IK L  +     Y+HCELDLS
Subjt:  KRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLS

Query:  FLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQG
        FLLG+SC +VPFANHDH RR L+QSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIV+VNVH G
Subjt:  FLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQG

Query:  YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEK
        YNQEDS+VMN+ASLERGMFRSE IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE+
Subjt:  YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEK

Query:  GMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGSI
        G+VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA      G S 
Subjt:  GMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGSI

Query:  KY------ATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
         Y      ATP+STP + +I +QLHRAGF+R G+ERVYNGR+GEMMRS+IFMGPTFYQRL+HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
Subjt:  KY------ATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER

Query:  DCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        DCLIAHGASANLHERLFTLSDSSQMH+C+KCK  A+VI+R+ + GRKIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Subjt:  DCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

AT3G23780.2 nuclear RNA polymerase D2A

0.0e+00

67.45

Show/hide

Query:  DMDTDDDDYSE------PVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTL
        DMD D  D  E       +N+ +LGE FL+ FCKK++ SFF++YGLISHQ+NSYN FI+ GLQ  F  FGE++V+P +D  KK D +WRYA+VKFG+VT+
Subjt:  DMDTDDDDYSE------PVNIHDLGEAFLKDFCKKSSMSFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTL

Query:  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEE-----QRRD
        +KP F+   +  KE   LP HARLQNMTYS+R+K+N+ VEV+   +V SDKFKTG+D YV+K ++    +D+ IG +PVMV S LC   E+     ++ D
Subjt:  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEE-----QRRD

Query:  CEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLI
        C FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV++RSE KRNR I+RL EN K+E+ K +EKVL VYFLSTEIPVW+LFFALGVSSD+E +DLI
Subjt:  CEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDREIVDLI

Query:  DYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFR
         +  DD ++ N L AS+     D   + FR    AL +++ +IK T FPPAE +++CL+LYLF  L+SLK+K RFLGYMVKCLL +Y G+RKC+NRD FR
Subjt:  DYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFR

Query:  NKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQ
        NKR ELAGELLEREI+VH+AHARR+M +A+Q+ L GD D++PIEHYLDAS+ITNGLSRAFSTGAW+H F++MER+SGVVA LGRANPLQT+ +LRRTRQQ
Subjt:  NKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQ

Query:  VAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRR
        V YTGKVGDARYPHPSHWGRVC++STPDGENCGL+KN+S+ GLVS  +L+ +V  LF CGME L+DDT T L GKHK+ LNG+WVG+C DS SFV +L+ 
Subjt:  VAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRR

Query:  KRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLS
        +RR++ L  ++E+KRD+   EVRIF+DAGR+LRPLLVVENL ++ + K   Y F  LLD GI+ELIG EEEEDC TAW IK L  +     Y+HCELDLS
Subjt:  KRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLS

Query:  FLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQG
        FLLG+SC +VPFANHDH RR L+QSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++C             L K   +NGQNAIV+VNVH G
Subjt:  FLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQG

Query:  YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEK
        YNQEDS+VMN+ASLERGMFRSE IRSYKAEVD K+ SEKR+K D+ + FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE+
Subjt:  YNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEK

Query:  GMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGSI
        G+VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAAL KGIA      G S 
Subjt:  GMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA-----SGGSI

Query:  KY------ATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
         Y      ATP+STP + +I +QLHRAGF+R G+ERVYNGR+GEMMRS+IFMGPTFYQRL+HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER
Subjt:  KY------ATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER

Query:  DCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC
        DCLIAHGASANLHERLFTLSDSSQMH+C+KCK  A+VI+R+ + GRKIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Subjt:  DCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

AT4G21710.1 DNA-directed RNA polymerase family protein

7.7e-194

34.98

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Query:  SFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMN
        ++F E GL+  Q++S+++FI++ +Q+  D   +I ++P   ++P  + D       + FG++ L KP      + G+   + P+ ARL+N+TYS+ + ++
Subjt:  SFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMN

Query:  INVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SNI
        +   V           K G D   ++   +QD   VFIG++P+M+ S  C + +   +D      C +D GGYF+I G+EK+ IAQE++    +++    
Subjt:  INVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SNI

Query:  QGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDPTVLNILFASVRE---VD
        Q    AY  EV+     +NR    + +R++  + ++   S + +   + ++ TEIP+ I+F ALG  +D++I++ I Y   D  ++ +L  S+ E   + 
Subjt:  QGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDPTVLNILFASVRE---VD

Query:  NDDKWKDF----------RRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELL
        N     D+           ++KR + +  + ++K   P     E C             +K  + GY++  LL    GRR  D+RD + NKR +LAG LL
Subjt:  NDDKWKDF----------RRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAGELL

Query:  EREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDAR
            ++      R +   +Q+ +   ++V  ++  + A  IT+GL  + +TG W  +     R +GV   L R     T++ LRR    +   GK+   R
Subjt:  EREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDAR

Query:  YPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLK-PIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNPLLHQ
          H S WG +C   TP+G+ CGL+KNL++   +++ +   PI+  L   G EN  + + + +    KIF+NG WVGV  D    V  LRR RRR  +  +
Subjt:  YPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLK-PIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKLRRKRRRNPLLHQ

Query:  VEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSK----------GENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT------DDEGTVKYSH
        V V RD  LKE+RI++D GR  RPL +V+N   + K +           E   +  L+ KG IE I TEEEE    + +I  L       ++  T  Y+H
Subjt:  VEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSK----------GENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLT------DDEGTVKYSH

Query:  CELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVS
        CE+  S +LG+   ++PF +H+ + R  +QS     QA+G   TN  FR+DTL++ L+YPQ+PL  T   + L        H   LP      G NAIV+
Subjt:  CELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVS

Query:  VNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQS-KIGRVDSLDDDGFPYIGANLQSGDIVIGRCAE-------
        ++ + GYNQEDS++MN++S++RG FRS   RSY+ E   K+     ++     + G T   + G  D LDDDG    G  +   D++IG+          
Subjt:  VNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQS-KIGRVDSLDDDGFPYIGANLQSGDIVIGRCAE-------

Query:  ------SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQL
              +  DHSI L+H+E GMV +V+L++N DG  +  V +R VR P +GDKFSS HGQKG +G   +QE+ P+TI+G+ PDI++NPHA PSR T GQL
Subjt:  ------SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQL

Query:  LEAALGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFG
        +E  +GK  A  G    ATP++  ++D+I   LH+ G+   G ER+YNG TG  + ++IF+GPT+YQRL HM +DK+  R  GPV  LTRQP   R R G
Subjt:  LEAALGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFG

Query:  GIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGI
        G++FGEMERDC+IAHGA+  L ERLF  SD+ ++HVC+ C  +A           K     CR C++  +IV+V +PY  KLL QEL SM I
Subjt:  GIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDEIVRVNVPYGAKLLCQELFSMGI

AT5G45140.1 nuclear RNA polymerase C2

1.7e-132

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Query:  DMD-TDDDDYSEPVNIHDLGEAFLKDFCKKSSM--SFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKP
        D+D T+DD + +   +     A +K    K  +   F    GL+   ++S+N FI  G+ K       I      DPS           ++F KV + +P
Subjt:  DMD-TDDDDYSEPVNIHDLGEAFLKDFCKKSSM--SFFNEYGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKP

Query:  KFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWM----KEEQRR--DCE
                    N+ P   RL +MTY++ + +NI     +      +K K+ KD             +V IGR+P+M+ S  C +    +EE  R  +C 
Subjt:  KFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFKTGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWM----KEEQRR--DCE

Query:  FDHGGYFLIKGAEKIFIAQEQICLRRLWI-----SNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREI
         D GGYF+IKG EK+ + QEQ+   R+ I      NI   +V   +E+ +++ +I++           KEK+ L ++    +IP+ I+  A+G+ SD+EI
Subjt:  FDHGGYFLIKGAEKIFIAQEQICLRRLWI-----SNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDREI

Query:  VDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSF-PPAEK-------IEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT
        V ++  GR DP     L  S+ E  ++         K+AL++L+ ++KK S+  P EK       + D    ++     + +QKC ++G M++ +++A  
Subjt:  VDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSF-PPAEK-------IEDCLNLYLFASLKSLKQKCRFLGYMVKCLLQAYT

Query:  GRRKCDNRDDFRNKRFELAGELL----EREIKVHIAHARRRMEKALQRDLYGDR-DVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLG
         +   D++D   NKR EL+G+L+    E   K  ++ A + ++  L + +   R D     +      I+ GL R  STG +     RM R  G+   L 
Subjt:  GRRKCDNRDDFRNKRFELAGELL----EREIKVHIAHARRRMEKALQRDLYGDR-DVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLG

Query:  RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLK-PIVPTLFRCGMENLVDDTSTSL--SGKHKIFL
        R + + +M  + +   Q   + KV   R   PS WG +C   TP+GE+CGL+KNL++   V+ +  + P+V   ++ G+ +L   ++  L       + L
Subjt:  RANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLK-PIVPTLFRCGMENLVDDTSTSL--SGKHKIFL

Query:  NGEWVGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVE-NLNRIDKSKGENY-----TFQSLLDKGIIELIGTEEEEDC
        NG  +G       F   LRR RR   +   V V  +E    V + SD GR+ RPL++ +  ++R+ +   +       TF   +  G+IE +   EE + 
Subjt:  NGEWVGVCEDSLSFVTKLRRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVE-NLNRIDKSKGENY-----TFQSLLDKGIIELIGTEEEEDC

Query:  RTAWSIKHLTDDEGTVKY-----------SHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMT
          A     L + +GT +            +H E++   +LG+  GL+P+ +H+ + R  +Q      QA+G    N   R+DTL + L YPQRPL  T T
Subjt:  RTAWSIKHLTDDEGTVKY-----------SHCELDLSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMT

Query:  ADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD
         + +G               +   GQNA V+V    GY+ ED++VMN++SL+RG  R   ++   A     ++      +D  +   +T     ++  LD
Subjt:  ADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD

Query:  DDGFPYIGANLQSGDIVIGR-----------CAESGADHS-----IKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL
        DDG    G  ++  DI I +            A S + +       K    E  +V +V L S+  G+      +R  R P LGDKFSS HGQKGV G +
Subjt:  DDGFPYIGANLQSGDIVIGR-----------CAESGADHS-----IKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL

Query:  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSIKYATPYSTPS-----IDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMG
          QE+FPF+  GI PD+++NPH FPSR T G+++E    K   S G   Y + +   S     ++ I   L   GF+  G + +Y+G +GE + + IFMG
Subjt:  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSIKYATPYSTPS-----IDDIKDQLHRAGFARCGSERVYNGRTGEMMRSLIFMG

Query:  PTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYC
        P +YQ+L HM  DK+  R +GP   +TRQP   + + GG++ GEMERDCLIA+GAS  ++ERL   SD  ++ VC+ C  +            K++   C
Subjt:  PTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYC

Query:  RVCESVDEIVRVNVPYGAKLLCQELFSMGI
          C++ D I  + +PY  KLL QEL SM +
Subjt:  RVCESVDEIVRVNVPYGAKLLCQELFSMGI

Sequences

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CDS sequence

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ATGAGGGGGGAAGACGTGGTCTGCAAGACAGTAAACCTGCACACCGGTGTGGTGCTCGCCATGCTTAAGTTAGCAAACAGAACGGTAGGGAGTGGAAAAGGATTCGGAGG
TGTTTTAGGTCAAACCAGGCGAAATCGAGGCGGCGGGGACCAAACGGCATCGAACGGACTCGGCCTCGGCCCATGGACGAGGCCGAGCAGGGGGTCGGGCCAAAAACCCG
ACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTTGCCTCCTTGGTCCATCTTTCAGTCCGATTTCTCCCCGATTGTCCTCGTCAGCTCCTTCGCACTTTCGGCCCTT
CTCCACCATAGCCACAAGTTTTCGAGCGCTGACATTTATCGTAATCCTCTCGTATTTCAAGTCAAAGAAGAAATTAGCGACAGAGTTGAGTTGAATCGTGCAGAGGCTGA
CAATTTTGTCTTCACCATGTTGTTTCTTGGCTTGTTTCTTTTGGTACTGGCTAAAGAAGCCATGGCGGATGTTAACTGTAACCCTAATTCGGCTTCGGATACATTGACAC
TTGATGAGATTAGAGACTCTTTGATTAGGCAGGAGGATACTATTGTTTTTAGTCTTATTGAGAGAGCTAGATTCCCTCTTAATCGGAAGATGTACGATCATAATCAGGCT
ATTCGTGGATGTAATGGTTCTTTGGTTGAGTTCATTGTGAGAGAAACCGAGGCCATTCAAGCTAAGGCTGGTAGATATGAGAATCCTGAAGAAAATCCATTCTTCCCAGA
ACATTTACCTCGTCCTTTGGTGCACCCTCACAAGTATCCAAAGGTTTTGCATCCTTCAGGCGCTTCAATTAATATGAACAAAGCCATATGGGACTTCTACTTCAACAAAT
TCTTGCCGTTGTTGGTTGCCGATGGCGACGATGGAAATTATGCAGCCACTGCTGCTAGTGATCTTGCTTGTTTGCAGGCACTTTCAAGGAGGATTCATTGTGGAAAATAT
GTAGCTGAGGTGAAATTTAGGGAATCCCCCAAAGAGTATGAGCCTCCCATTCGCTCCCAGGAAAGAGATACTTTGATGAAGCTATTGACATTTGAGGCAGTGGAAGAGAT
GGTGAAGAAGAGAGTAGAGAAGAAGGCTATGGTGTTTGGGCAAGAAGTGACCCTCAACAACACAAATGGAGGAGGAAAGTATAAGATCAATCCATCACTTGCATCTCGAC
TTTACGACGAATGGCGAGGACCGACGGCATTGCGTGGATGCTCCATTCTGATCTCTCTCGAAGCGGATAAAGCTGGTGGAGTCGTCGGAGGAAGTGGCCTAGGGTATAGT
GGAGTTTTGAGTGTGTATTTTGAGCATCGTAGCGTGAAATTTCTTTTTCGTTTGCGAAGTTCGGAGTTCAGTGAGTGTAGCATATGTGTGGACTGGTACTGGTTAGTAGT
TCAGCTTTTACTTCGGGGGTTTTACCTTACCTTGAACCTAATGGGGACATCGGGCGGAAAGGACGATGTAGAGATGAATAGTGAGCCGGAAGACTTATCACCTGGAACTG
ATATGGATACTGACGATGACGATTATTCTGAGCCAGTCAACATACATGATCTGGGGGAAGCATTTTTAAAGGATTTCTGTAAGAAGTCATCAATGTCATTTTTTAATGAG
TATGGCCTTATCAGTCACCAAATTAACTCATACAATGACTTCATAAAAAGTGGTCTTCAGAAGGCCTTCGATTACTTTGGTGAGATTGTAGTTCAGCCAGGATATGATCC
CTCTAAGAAAGGAGATGGGGAATGGAGATATGCTTCAGTGAAGTTTGGTAAGGTAACCCTCGATAAACCAAAGTTCTGGGGTGGTGCAGCAAGTGGAAAAGAGTACAACA
TGCTTCCTAGGCATGCTCGACTTCAGAACATGACTTATTCATCAAGGATGAAAATGAATATTAATGTGGAGGTGTATACTCAAAAGTTAGTCAGCAGTGACAAATTTAAA
ACTGGAAAAGATCAATATGTTGACAAGGACCTTGTAAGTCAAGATAACAGGGATGTATTTATAGGCAGGCTACCTGTGATGGTGAATTCTGACCTTTGCTGGATGAAGGA
AGAGCAGAGACGTGACTGTGAATTTGACCATGGAGGTTATTTTTTAATCAAAGGTGCAGAAAAAATATTTATTGCTCAAGAGCAAATTTGTTTGAGAAGACTCTGGATTT
CTAATATTCAAGGTTGGACTGTGGCATACAGATCAGAAGTTAAGAGAAATAGACTAATTATTAGACTAGTTGAAAATTCCAAGTCTGAAGAACTAAAAAGCAAGGAGAAA
GTCCTCAATGTATATTTCTTGTCTACAGAAATTCCTGTGTGGATTTTATTCTTTGCACTTGGTGTTTCATCTGACAGAGAAATAGTAGATTTAATCGATTATGGCAGAGA
TGATCCAACTGTTCTGAATATTCTTTTTGCCTCCGTTCGTGAAGTTGATAATGATGATAAGTGGAAAGATTTTCGAAGAGATAAAAGAGCTCTGAATTTTTTGGACAATG
AGATTAAAAAGACCAGCTTCCCACCTGCCGAAAAAATTGAAGATTGCCTGAATCTTTATCTTTTTGCTAGCTTGAAAAGCTTAAAGCAGAAGTGTCGTTTCCTTGGTTAT
ATGGTTAAATGTCTCCTGCAAGCCTATACTGGCCGTAGGAAATGTGATAATAGGGATGATTTCCGCAATAAGAGGTTTGAGTTGGCTGGAGAATTGCTTGAAAGAGAGAT
TAAAGTACATATTGCACATGCACGTAGACGCATGGAAAAGGCTTTGCAAAGGGATCTCTATGGAGATCGTGATGTGCGTCCAATAGAACACTATTTGGATGCTTCCATAA
TCACTAATGGTCTATCCCGTGCATTCTCTACTGGAGCATGGGCACATTCATTCAAGAGGATGGAAAGGATCTCAGGTGTGGTGGCAACACTTGGTCGTGCTAATCCCCTG
CAGACAATGGCTGAATTGAGGAGAACACGTCAACAGGTTGCATACACTGGGAAAGTTGGTGATGCAAGATACCCGCATCCTTCTCACTGGGGAAGGGTTTGCTATATCTC
CACCCCGGATGGAGAAAATTGTGGGCTTATTAAAAATTTGTCCATCACAGGACTTGTAAGCTTAAACACATTGAAGCCCATAGTTCCCACACTGTTTCGTTGTGGGATGG
AGAATTTGGTGGACGATACATCTACTTCTCTCAGTGGGAAGCACAAAATTTTTCTCAATGGGGAATGGGTTGGAGTTTGTGAAGATTCCCTTTCATTTGTAACGAAACTG
AGACGCAAGCGACGAAGGAATCCGTTACTGCATCAGGTAGAAGTCAAAAGAGATGAACCACTTAAAGAAGTACGAATATTTTCTGACGCGGGAAGGATATTACGTCCTCT
CTTAGTTGTAGAGAACTTAAACAGGATTGATAAGTCTAAGGGGGAAAACTACACTTTTCAATCCCTTTTGGACAAGGGAATAATTGAACTTATTGGAACTGAAGAAGAAG
AAGACTGTCGTACAGCTTGGAGTATTAAGCATCTTACGGATGATGAAGGGACTGTGAAATATTCCCATTGTGAACTTGATTTGTCATTTTTATTAGGTTTAAGCTGCGGA
CTTGTCCCGTTTGCAAATCATGACCATGCTAGGAGGGCTCTGTTTCAATCACAGAAACACTCTAATCAAGCTATTGGATTTTCAACAACCAATTCCAATTTCCGTGTGGA
TACTTTATCTCACCAGTTACACTATCCACAAAGGCCACTTTTTCGTACAATGACTGCTGATTGCCTTGGGACACCTGGATACCTGTCATCTCACACTGGGATATTACCAA
AACCTGAATTCTACAATGGTCAGAATGCTATTGTGTCAGTCAATGTTCACCAGGGTTACAACCAAGAAGATTCGTTAGTAATGAACCGGGCCTCATTAGAGCGTGGTATG
TTTCGGTCTGAGCATATCCGGAGTTACAAGGCTGAGGTAGATAATAAAGAATCTTCCGAAAAGAGGAGGAAATCCGATGATGCAATAAATTTTGGGAAGACTCAAAGTAA
AATTGGAAGAGTCGACAGCTTAGACGATGATGGCTTCCCTTACATCGGTGCAAACTTGCAGAGTGGAGACATTGTCATTGGTAGGTGTGCAGAATCTGGGGCTGATCACA
GTATCAAACTGAAGCATACTGAGAAGGGCATGGTTCAGAAAGTTGTGCTCTCTTCTAATGACGACGGGAAGAATTATGCTGTTGTTTGCCTGAGACAGGTTCGTTCTCCA
TGTCTTGGAGACAAGTTTTCTAGTATGCATGGACAAAAGGGAGTTCTGGGATTTTTGGAGTCTCAAGAGAATTTCCCCTTCACCATCCAGGGGATAGTTCCAGATATTGT
TATAAACCCGCACGCATTTCCTTCGCGACAAACTCCTGGTCAACTATTGGAAGCTGCTCTCGGGAAAGGGATTGCTTCTGGCGGTTCGATAAAATATGCAACTCCTTACT
CCACTCCTTCCATTGATGACATTAAAGACCAGCTTCACAGGGCAGGGTTTGCGAGATGTGGGAGTGAGAGGGTGTACAATGGCCGAACTGGTGAAATGATGCGGTCACTC
ATATTCATGGGTCCAACATTCTACCAGCGCTTAATCCACATGGCTGAAGACAAAGTGAAATTTCGCAACACCGGCCCCGTCCACCCTCTCACACGCCAACCAGTCGCTGA
CCGAAAGCGTTTTGGCGGGATCAAGTTCGGGGAGATGGAACGTGACTGTCTTATAGCTCACGGTGCCTCGGCCAACTTGCACGAACGTTTGTTTACCCTCAGTGACTCTT
CCCAGATGCACGTTTGCCAGAAATGCAAAAATGTAGCAAGTGTGATCCAACGGTCAGTGGCCGGTGGTCGTAAGATAAGGGGTCCATACTGTCGGGTTTGCGAGTCGGTC
GATGAGATCGTGAGGGTTAATGTACCCTATGGAGCGAAGTTGTTGTGCCAGGAGCTCTTCAGCATGGGCATCAATCTCAAGTTCGAAACACAACTCTGCTGA

mRNA sequence

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Protein sequence

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MRGEDVVCKTVNLHTGVVLAMLKLANRTVGSGKGFGGVLGQTRRNRGGGDQTASNGLGLGPWTRPSRGSGQKPDPFGLGPSHLPVLPPWSIFQSDFSPIVLVSSFALSAL
LHHSHKFSSADIYRNPLVFQVKEEISDRVELNRAEADNFVFTMLFLGLFLLVLAKEAMADVNCNPNSASDTLTLDEIRDSLIRQEDTIVFSLIERARFPLNRKMYDHNQA
IRGCNGSLVEFIVRETEAIQAKAGRYENPEENPFFPEHLPRPLVHPHKYPKVLHPSGASINMNKAIWDFYFNKFLPLLVADGDDGNYAATAASDLACLQALSRRIHCGKY
VAEVKFRESPKEYEPPIRSQERDTLMKLLTFEAVEEMVKKRVEKKAMVFGQEVTLNNTNGGGKYKINPSLASRLYDEWRGPTALRGCSILISLEADKAGGVVGGSGLGYS
GVLSVYFEHRSVKFLFRLRSSEFSECSICVDWYWLVVQLLLRGFYLTLNLMGTSGGKDDVEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEAFLKDFCKKSSMSFFNE
YGLISHQINSYNDFIKSGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQKLVSSDKFK
TGKDQYVDKDLVSQDNRDVFIGRLPVMVNSDLCWMKEEQRRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEK
VLNVYFLSTEIPVWILFFALGVSSDREIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRDKRALNFLDNEIKKTSFPPAEKIEDCLNLYLFASLKSLKQKCRFLGY
MVKCLLQAYTGRRKCDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWAHSFKRMERISGVVATLGRANPL
QTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCYISTPDGENCGLIKNLSITGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKHKIFLNGEWVGVCEDSLSFVTKL
RRKRRRNPLLHQVEVKRDEPLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTDDEGTVKYSHCELDLSFLLGLSCG
LVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHTGILPKPEFYNGQNAIVSVNVHQGYNQEDSLVMNRASLERGM
FRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSP
CLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSIKYATPYSTPSIDDIKDQLHRAGFARCGSERVYNGRTGEMMRSL
IFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESV
DEIVRVNVPYGAKLLCQELFSMGINLKFETQLC

Lag0037181 (gene) of Sponge gourd (AG-4) v1 genome