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Lag0037201 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037201
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L39
Genome locationchr2:4257507..4258190
RNA-Seq ExpressionLag0037201
SyntenyLag0037201
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006520 - cellular amino acid metabolic process (biological process)
GO:0006811 - ion transport (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004069 - L-aspartate:2-oxoglutarate aminotransferase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5726265.1 aspartate aminotransferase chloroplastic [Tripterygium wilfordii]1.9e-0986.67Show/hide
Query:  AVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAS
        AVSQD Q+QEEAREEDEAEQANP+LDP ENRQH+QIQR+AQALAS
Subjt:  AVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAS

KAG6528313.1 hypothetical protein ZIOFF_010466 [Zingiber officinale]4.7e-0863.33Show/hide
Query:  FSILFQSAAVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLS
        F + F   A++QD  +QEEA EEDEAEQAN +LDPP + QH Q+QR+AQALAS+Q RVLS
Subjt:  FSILFQSAAVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLS

KAG7031772.1 hypothetical protein SDJN02_05813, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1292Show/hide
Query:  VSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVL
        VSQDFQNQEEAREEDEAEQA PALDP ENRQ+ QIQRKAQALASHQARVL
Subjt:  VSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVL

PKA65509.1 hypothetical protein AXF42_Ash005843 [Apostasia shenzhenica]9.5e-0967.27Show/hide
Query:  AVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLSDGY
        AV+QDFQ++EEA EEDEAEQA+P LDP E+ +H+QIQR+AQALA H+ARVL   +
Subjt:  AVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLSDGY

VVA11576.1 unknown partial [Prunus dulcis]1.2e-0873.08Show/hide
Query:  AAVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVL
        +AV QD  NQEEA EEDEAEQA+P+LDP E+RQH Q+QR+AQALA HQAR L
Subjt:  AAVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVL

TrEMBL top hitse value%identityAlignment
A0A2I0BCI7 Uncharacterized protein4.6e-0967.27Show/hide
Query:  AVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLSDGY
        AV+QDFQ++EEA EEDEAEQA+P LDP E+ +H+QIQR+AQALA H+ARVL   +
Subjt:  AVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLSDGY

A0A445K5S6 60S ribosomal protein L393.0e-0870.59Show/hide
Query:  VSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLS
        V+QD QNQEE  EEDEAEQA+P LDP E+RQH Q+QR+A +LASHQA +LS
Subjt:  VSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLS

A0A5E4E8H2 Uncharacterized protein6.0e-0973.08Show/hide
Query:  AAVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVL
        +AV QD  NQEEA EEDEAEQA+P+LDP E+RQH Q+QR+AQALA HQAR L
Subjt:  AAVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVL

A0A6N2M5H5 Uncharacterized protein3.5e-0973.58Show/hide
Query:  AAVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLS
        AAV+QD Q+QEEA EEDEAEQA+P+LDP E+RQH Q+Q +AQALA +QARVLS
Subjt:  AAVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLS

A0A7J7BX51 Aspartate aminotransferase9.2e-1086.67Show/hide
Query:  AVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAS
        AVSQD Q+QEEAREEDEAEQANP+LDP ENRQH+QIQR+AQALAS
Subjt:  AVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTAATTCGATTTTCTATTCTCTTCCAATCCGCAGCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAACAGGCCAATCCCGC
ACTGGATCCGCCTGAGAACCGACAACACGATCAGATACAACGCAAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGAGCGATGGATATGACAGTGGATTAGCAG
TTTTTCCAACCCTTTATGGCATTTACTTGCTTCTTTTCTCCAATGATTCGAATGAGATCGATGGATATTCTTTAGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTAATTCGATTTTCTATTCTCTTCCAATCCGCAGCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAACAGGCCAATCCCGC
ACTGGATCCGCCTGAGAACCGACAACACGATCAGATACAACGCAAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGAGCGATGGATATGACAGTGGATTAGCAG
TTTTTCCAACCCTTTATGGCATTTACTTGCTTCTTTTCTCCAATGATTCGAATGAGATCGATGGATATTCTTTAGAAAATTGA
Protein sequenceShow/hide protein sequence
MFVIRFSILFQSAAVSQDFQNQEEAREEDEAEQANPALDPPENRQHDQIQRKAQALASHQARVLSDGYDSGLAVFPTLYGIYLLLFSNDSNEIDGYSLEN