; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037209 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037209
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA ligase
Genome locationchr2:4311411..4311788
RNA-Seq ExpressionLag0037209
SyntenyLag0037209
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031776.1 hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-5287.2Show/hide
Query:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD
        MLNDY+PFSFT KLKSSI CFR DH D  ENE D  SSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRS RR HHSADFRYDPSSYALNFEDEQVRD D
Subjt:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD

Query:  EFPVRDFASRLPASPPTSRRFSPAK
        EFP+RDFASRLPASPPTS R SPAK
Subjt:  EFPVRDFASRLPASPPTSRRFSPAK

XP_022138148.1 uncharacterized protein LOC111009386 [Momordica charantia]6.9e-4174.4Show/hide
Query:  NDYN--PFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD
        N+YN  PFSFTHKLKSSI CFR DH DL ++ED+  +S R+PRSPLKS A+E  ELRGMCRNLVARIGRS RR HHSADFRYDPSSYALNFEDE  R  D
Subjt:  NDYN--PFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD

Query:  EFPVRDFASRLPASPPTSRRFSPAK
        +FP+RDFASRLPASP +S  F PAK
Subjt:  EFPVRDFASRLPASPPTSRRFSPAK

XP_022940408.1 uncharacterized protein LOC111446022 [Cucurbita moschata]6.6e-5287.2Show/hide
Query:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD
        MLNDY+PFSFT KLKSSI CFR DH D  ENE D  SSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRS RR HHSADFRYDPSSYALNFEDEQVRD D
Subjt:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD

Query:  EFPVRDFASRLPASPPTSRRFSPAK
        EFP+RDFASRLPASPPTS R SPAK
Subjt:  EFPVRDFASRLPASPPTSRRFSPAK

XP_022981208.1 uncharacterized protein LOC111480417 [Cucurbita maxima]7.8e-5387.2Show/hide
Query:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD
        MLN+Y+PFSFT KLKSSIRCFR DHSD  E+EDD  SSPRTPRSPLKSMAAEFPE+RGMCRNLVARIGR  RR HHSADFRYDPSSYALNFEDEQVRD D
Subjt:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD

Query:  EFPVRDFASRLPASPPTSRRFSPAK
        EFP+RDFASRLPASPPTSRR SPAK
Subjt:  EFPVRDFASRLPASPPTSRRFSPAK

XP_023523424.1 uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]1.6e-5388.8Show/hide
Query:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD
        MLNDY+PFSFT KLKSSI CFR DH D  ENEDD  SSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRS RR HHSADFRYDPSSYALNFEDEQVRD D
Subjt:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD

Query:  EFPVRDFASRLPASPPTSRRFSPAK
        EFP+RDFASRLPASPPTSRR SPAK
Subjt:  EFPVRDFASRLPASPPTSRRFSPAK

TrEMBL top hitse value%identityAlignment
A0A1S3BVQ9 uncharacterized protein LOC1034937789.4e-3672.27Show/hide
Query:  MLNDYNPFSFTHKLKSSI-RCFRPDH-SDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIG-RSHRRDHHSADFRYDPSSYALNFEDEQVR
        M N YNPFSFTHKLKSSI  CFRPDH ++L ENEDD+ +        LKSM ++ PELRGMCR+LVARI   S RR HHSADFRYDPSSYALNFEDEQVR
Subjt:  MLNDYNPFSFTHKLKSSI-RCFRPDH-SDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIG-RSHRRDHHSADFRYDPSSYALNFEDEQVR

Query:  DADEFPVRDFASRLPASPP
        D +EFP+RDF SRLPASPP
Subjt:  DADEFPVRDFASRLPASPP

A0A5A7VBS3 DNA ligase9.4e-3672.27Show/hide
Query:  MLNDYNPFSFTHKLKSSI-RCFRPDH-SDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIG-RSHRRDHHSADFRYDPSSYALNFEDEQVR
        M N YNPFSFTHKLKSSI  CFRPDH ++L ENEDD+ +        LKSM ++ PELRGMCR+LVARI   S RR HHSADFRYDPSSYALNFEDEQVR
Subjt:  MLNDYNPFSFTHKLKSSI-RCFRPDH-SDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIG-RSHRRDHHSADFRYDPSSYALNFEDEQVR

Query:  DADEFPVRDFASRLPASPP
        D +EFP+RDF SRLPASPP
Subjt:  DADEFPVRDFASRLPASPP

A0A6J1CC83 uncharacterized protein LOC1110093863.3e-4174.4Show/hide
Query:  NDYN--PFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD
        N+YN  PFSFTHKLKSSI CFR DH DL ++ED+  +S R+PRSPLKS A+E  ELRGMCRNLVARIGRS RR HHSADFRYDPSSYALNFEDE  R  D
Subjt:  NDYN--PFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD

Query:  EFPVRDFASRLPASPPTSRRFSPAK
        +FP+RDFASRLPASP +S  F PAK
Subjt:  EFPVRDFASRLPASPPTSRRFSPAK

A0A6J1FP70 uncharacterized protein LOC1114460223.2e-5287.2Show/hide
Query:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD
        MLNDY+PFSFT KLKSSI CFR DH D  ENE D  SSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRS RR HHSADFRYDPSSYALNFEDEQVRD D
Subjt:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD

Query:  EFPVRDFASRLPASPPTSRRFSPAK
        EFP+RDFASRLPASPPTS R SPAK
Subjt:  EFPVRDFASRLPASPPTSRRFSPAK

A0A6J1J1H3 uncharacterized protein LOC1114804173.8e-5387.2Show/hide
Query:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD
        MLN+Y+PFSFT KLKSSIRCFR DHSD  E+EDD  SSPRTPRSPLKSMAAEFPE+RGMCRNLVARIGR  RR HHSADFRYDPSSYALNFEDEQVRD D
Subjt:  MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDAD

Query:  EFPVRDFASRLPASPPTSRRFSPAK
        EFP+RDFASRLPASPPTSRR SPAK
Subjt:  EFPVRDFASRLPASPPTSRRFSPAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11070.1 unknown protein1.9e-0946.46Show/hide
Query:  RTPRSP---LKSMAAEFPELRGMCRNLVARIGRSHRRD-----------HHS----ADFRYDPSSYALNFEDEQVRDADEFPVRDFASRLPASPPTSRR
        RTPRSP   LKS A E  ELR  CR + +RI  + R +           HHS     DF YDP SYALNFED  VR  D+    +F +RLP SP T  R
Subjt:  RTPRSP---LKSMAAEFPELRGMCRNLVARIGRSHRRD-----------HHS----ADFRYDPSSYALNFEDEQVRDADEFPVRDFASRLPASPPTSRR

AT5G35090.1 unknown protein8.7e-1036.96Show/hide
Query:  SFTHKLKSSI---RCFRPDHSDLTEN-EDDSHSSPRTPRSPLKS-----MAAEFPEL-------RGMCRNLVARIG---------RSHRRDHHSADFRYD
        S   KLKS      CFR  +    +N  DD  SSP T     +S     M  + P L          C++L+ R+G           H R  H+ADF YD
Subjt:  SFTHKLKSSI---RCFRPDHSDLTEN-EDDSHSSPRTPRSPLKS-----MAAEFPEL-------RGMCRNLVARIG---------RSHRRDHHSADFRYD

Query:  PSSYALNFE-DEQVRDADEFPVRDFASRLPASPPTSRR
        PSSYALNF+  ++  + D FP+R+F++RLP SPP+S +
Subjt:  PSSYALNFE-DEQVRDADEFPVRDFASRLPASPPTSRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAACGACTACAATCCTTTTTCATTCACTCACAAGCTCAAATCCTCCATCCGCTGTTTCCGCCCCGATCATAGCGATTTGACCGAAAACGAAGACGATTCTCATTC
TTCTCCAAGAACTCCTCGATCGCCTCTCAAATCAATGGCGGCAGAGTTCCCGGAGCTCCGCGGTATGTGCCGGAATCTCGTCGCTCGGATCGGCCGGAGTCACCGCCGGG
ACCATCACTCCGCCGATTTCAGATACGATCCTTCGAGCTATGCTCTTAATTTCGAGGACGAACAGGTTCGCGATGCTGATGAGTTTCCGGTTAGGGATTTTGCTTCGAGA
TTGCCGGCGTCGCCGCCGACTTCCCGGAGATTTTCGCCGGCGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAACGACTACAATCCTTTTTCATTCACTCACAAGCTCAAATCCTCCATCCGCTGTTTCCGCCCCGATCATAGCGATTTGACCGAAAACGAAGACGATTCTCATTC
TTCTCCAAGAACTCCTCGATCGCCTCTCAAATCAATGGCGGCAGAGTTCCCGGAGCTCCGCGGTATGTGCCGGAATCTCGTCGCTCGGATCGGCCGGAGTCACCGCCGGG
ACCATCACTCCGCCGATTTCAGATACGATCCTTCGAGCTATGCTCTTAATTTCGAGGACGAACAGGTTCGCGATGCTGATGAGTTTCCGGTTAGGGATTTTGCTTCGAGA
TTGCCGGCGTCGCCGCCGACTTCCCGGAGATTTTCGCCGGCGAAATGA
Protein sequenceShow/hide protein sequence
MLNDYNPFSFTHKLKSSIRCFRPDHSDLTENEDDSHSSPRTPRSPLKSMAAEFPELRGMCRNLVARIGRSHRRDHHSADFRYDPSSYALNFEDEQVRDADEFPVRDFASR
LPASPPTSRRFSPAK