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Lag0037244 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037244
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
Genome locationchr2:4566651..4567831
RNA-Seq ExpressionLag0037244
SyntenyLag0037244
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5945839.1 hypothetical protein HYC85_016067 [Camellia sinensis]4.3e-4767.35Show/hide
Query:  LVGGGVGSGRGGGGDDDGGENWFG-DGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQ
        L GGG G G GGGG   GG +  G  GY DS  GN S +EYY KMI+AYPGDAL+L NYA+FLKEV+GD VKAEEYC RAILA P+DGN LSLY DLIWQ
Subjt:  LVGGGVGSGRGGGGDDDGGENWFG-DGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQ

Query:  THRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEV
        TH+D  RA+TYFDQAV +AP+DCYV+ASYA+FLWD+ + +E E+D+V
Subjt:  THRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEV

KAF8400634.1 hypothetical protein HHK36_013933 [Tetracentron sinense]2.5e-4765.85Show/hide
Query:  PEVLVGGGVGSGRG---GGGDDDGGENWFGDGYGDSGRGNG-----SMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNA
        P +LVGGG+GS  G   GGG   GG    GDG GD   G+G     S D YYQKMIEA PG+ L+LGNYARFLKEV GD+VKAEEYC RAILA P+DGN 
Subjt:  PEVLVGGGVGSGRG---GGGDDDGGENWFGDGYGDSGRGNG-----SMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNA

Query:  LSLYGDLIWQTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEVEITKTNT
        LSLY DLIWQTH+D  RA++YFDQAV +AP DCYVLASYA+FLWDA +EDE EE+E  I   NT
Subjt:  LSLYGDLIWQTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEVEITKTNT

XP_015867671.1 uncharacterized protein LOC107405173 [Ziziphus jujuba]3.5e-4968.83Show/hide
Query:  VLVGGGVGS--------GRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALS
        VLVGGGVG+        GRGGGGD DG +    DGY DSG+G+ S+D YY+KMI+ YP DAL+LGNYARFLKEV GDV KAEEYCERAILA+P+DGNALS
Subjt:  VLVGGGVGS--------GRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALS

Query:  LYGDLIWQTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDE
        LYGDLIW  H+D  RA++YF QAV SAP+DC+VLASYAKFLW+AGDE+E +E++
Subjt:  LYGDLIWQTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDE

XP_038896674.1 uncharacterized protein LOC120084935 isoform X1 [Benincasa hispida]3.0e-7274.76Show/hide
Query:  MIRAASMSVSCGSLTCRASVSMASNSGTSFSSPIVVERKGGEVEVEV-SERLRFEKCVVKTELRDGLRMEEEEREDFEVESAEAKAPEVLVGGGVGSGRG
        +IR ASMSVSCGSLTCRAS+    NSG SFS PI+VERKGGE+EV+V SE+ +FEKCV+K E+   +  E+E   DFEVES     PEV VGGGVGSG G
Subjt:  MIRAASMSVSCGSLTCRASVSMASNSGTSFSSPIVVERKGGEVEVEV-SERLRFEKCVVKTELRDGLRMEEEEREDFEVESAEAKAPEVLVGGGVGSGRG

Query:  GGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRAKTYF
              GGENWFGD  GDSGRG+GSMDEYYQKMIEAYPGDALIL NYARFLKEVK D VKAEEYCERAILAKPNDGN LSLYGDLIWQTHRD DRA+TYF
Subjt:  GGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRAKTYF

Query:  DQAVNSAPND
         QAVNS+PND
Subjt:  DQAVNSAPND

XP_038896675.1 uncharacterized protein LOC120084935 isoform X2 [Benincasa hispida]2.5e-7976.02Show/hide
Query:  MIRAASMSVSCGSLTCRASVSMASNSGTSFSSPIVVERKGGEVEVEV-SERLRFEKCVVKTELRDGLRMEEEEREDFEVESAEAKAPEVLVGGGVGSGRG
        +IR ASMSVSCGSLTCRAS+    NSG SFS PI+VERKGGE+EV+V SE+ +FEKCV+K E+   +  E+E   DFEVES     PEV VGGGVGSG G
Subjt:  MIRAASMSVSCGSLTCRASVSMASNSGTSFSSPIVVERKGGEVEVEV-SERLRFEKCVVKTELRDGLRMEEEEREDFEVESAEAKAPEVLVGGGVGSGRG

Query:  GGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRAKTYF
              GGENWFGD  GDSGRG+GSMDEYYQKMIEAYPGDALIL NYARFLKEVK D VKAEEYCERAILAKPNDGN LSLYGDLIWQTHRD DRA+TYF
Subjt:  GGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRAKTYF

Query:  DQAVNSAPNDCYVLASYAKFL
         QAVNS+PNDCYVLASYAKFL
Subjt:  DQAVNSAPNDCYVLASYAKFL

TrEMBL top hitse value%identityAlignment
A0A1R3GI83 Tetratricopeptide-like helical1.4e-4648.58Show/hide
Query:  SLTCRASVSMASNSGTSFSSPIVVERKGGEVEVEVSERLRFEKCVVKTE---LRDGLRMEEEEREDFEVESAEAKAPEVLVGGGV--------------G
        ++TC +S+S+ S+  +S      +       E ++ E L F K     +   +  G+ +EEE+  + E E AE +  +    GGV              G
Subjt:  SLTCRASVSMASNSGTSFSSPIVVERKGGEVEVEVSERLRFEKCVVKTE---LRDGLRMEEEEREDFEVESAEAKAPEVLVGGGV--------------G

Query:  SGRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRA
         G GGGG  DGG+N +  GY DS  GN S + YYQKMIEA PG+ L+L NYARFLKEV+GD VKAEEYC RAILA PNDGN LS+YGDLIW+T +D  RA
Subjt:  SGRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRA

Query:  KTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEVEITKTNTQ
        +TYFDQAV +APNDCYVLASYA FLWDA +++E EE+  EI +  ++
Subjt:  KTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEVEITKTNTQ

A0A4S4F256 Uncharacterized protein7.9e-4767.59Show/hide
Query:  GGGVGSGRGGGGDDDGGENWFG-DGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTH
        GGG G G GGGG   GG +  G  GY DS  GN S +EYY KMI+AYPGDAL+L NYA+FLKEV+GD VKAEEYC RAILA P+DGN LSLY DLIWQTH
Subjt:  GGGVGSGRGGGGDDDGGENWFG-DGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTH

Query:  RDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEV
        +D  RA+TYFDQAV +AP+DCYV+ASYA+FLWD+ + +E E+D+V
Subjt:  RDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEV

A0A5C7HZ45 Uncharacterized protein1.4e-4666.23Show/hide
Query:  VLVGGGVGSGRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQ
        +++  G G G GG G   GG    GDGYGDSGRG+ SMD YYQKMIE YPGDALIL NYA+FLK+V+ D VKAEEYCERAILAKP++G  L LYGDLIW 
Subjt:  VLVGGGVGSGRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQ

Query:  THRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEVEITKTNT
         ++D  RA+TYFDQAV+SAP+DCYVLASYA+FLWDAG E+E ++ + + TKT T
Subjt:  THRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEVEITKTNT

A0A6P3YUA0 uncharacterized protein LOC1074051731.7e-4968.83Show/hide
Query:  VLVGGGVGS--------GRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALS
        VLVGGGVG+        GRGGGGD DG +    DGY DSG+G+ S+D YY+KMI+ YP DAL+LGNYARFLKEV GDV KAEEYCERAILA+P+DGNALS
Subjt:  VLVGGGVGS--------GRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALS

Query:  LYGDLIWQTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDE
        LYGDLIW  H+D  RA++YF QAV SAP+DC+VLASYAKFLW+AGDE+E +E++
Subjt:  LYGDLIWQTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDE

A0A7J7GYP1 Uncharacterized protein2.1e-4767.35Show/hide
Query:  LVGGGVGSGRGGGGDDDGGENWFG-DGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQ
        L GGG G G GGGG   GG +  G  GY DS  GN S +EYY KMI+AYPGDAL+L NYA+FLKEV+GD VKAEEYC RAILA P+DGN LSLY DLIWQ
Subjt:  LVGGGVGSGRGGGGDDDGGENWFG-DGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQ

Query:  THRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEV
        TH+D  RA+TYFDQAV +AP+DCYV+ASYA+FLWD+ + +E E+D+V
Subjt:  THRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-2035.62Show/hide
Query:  GTSFSSPIVVERKGGEVEVEVSERLRFEKCVVKTELRDGLRMEEEEREDFEVESAEAKAPEVLVGGGVGSGRGGGGDDDGGENWFG-DGYGDSGRGNGSM
        G  FS     E   GE      ER  FE+ + K  L  G+R    +   FE+E     +P + +  G+G  +    D  G E  F   GY D   G    
Subjt:  GTSFSSPIVVERKGGEVEVEVSERLRFEKCVVKTELRDGLRMEEEEREDFEVESAEAKAPEVLVGGGVGSGRGGGGDDDGGENWFG-DGYGDSGRGNGSM

Query:  DEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGD
         +YY+ M+E YP   L+L NYA+FL E KGD+  AEEY  +  + +P+DG AL+ YG L+ + H+D  +A +YF++AV ++P+D  VLA+YA FLW+   
Subjt:  DEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGD

Query:  EDESEEDEVEITKTNTQSE
        +D+ E+D+ +  +++ Q +
Subjt:  EDESEEDEVEITKTNTQSE

AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-3756.46Show/hide
Query:  EVLVGGGVGSGRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIW
        E LV GG G   G GG+   G    G    D GR   + D YY++MI++ PG++L+ GNYA+FLKEVKGD+ KAEEYCERAIL   NDGN LSLY DLI 
Subjt:  EVLVGGGVGSGRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIW

Query:  QTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDE
          H+D  RA +Y+ QAV  +P DCYV ASYA+FLWD    DE EEDE
Subjt:  QTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDE

AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.2e-3237.6Show/hide
Query:  SVSMASNSGTSFSSPIVVERKGGEVEVEVSERLRFEKCVVKTELRDGLRM--------------EEEEREDFEVESAEAKAPEV----------LVGGGV
        SV   S+ G  F+        GG++ +EV   +   + + ++++    RM              E++E  + E+  A+     +            GGGV
Subjt:  SVSMASNSGTSFSSPIVVERKGGEVEVEVSERLRFEKCVVKTELRDGLRM--------------EEEEREDFEVESAEAKAPEV----------LVGGGV

Query:  GSGRG-GGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGD
        G G G  GG  +GG    G GY D  +    + +YY++M+ + P ++L+L NY +FL EV+ D   AEEY  RAIL  P DG ALS+YG LIW+T RD  
Subjt:  GSGRG-GGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGD

Query:  RAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEVE
        RA+ YFDQAVN++PNDC VL SYA+F+W+A D+D+ +E+E E
Subjt:  RAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDEVE

AT4G32340.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.1e-3959.44Show/hide
Query:  GGVGSGRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKP-NDGNALSLYGDLIWQTHR
        GG   G GG G D  G        G  G G GS+D YY++MI+ YPGD L+L NYARFLKEVKGD  KAEEYCERA+L++   DG  LS+YGDLIW+ H 
Subjt:  GGVGSGRGGGGDDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKP-NDGNALSLYGDLIWQTHR

Query:  DGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDE
        DG RA++Y+DQAV S+P+DC VLASYA+FLWDA +E E EE +
Subjt:  DGDRAKTYFDQAVNSAPNDCYVLASYAKFLWDAGDEDESEEDE

AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-3843.29Show/hide
Query:  MSVSCGSLTCRASVSMASNSG----TSFSSPIVVERKGGEVEVEVSERLRFEKCVVKTELRDGLRMEEEEREDFEVESAEAKAPEVLVGGGVGSGRGGGG
        MSV     + R     AS+S     TS   P+     GG +  +V E + F   +++T   DG+    +E              EV  GGG G   GGG 
Subjt:  MSVSCGSLTCRASVSMASNSG----TSFSSPIVVERKGGEVEVEVSERLRFEKCVVKTELRDGLRMEEEEREDFEVESAEAKAPEVLVGGGVGSGRGGGG

Query:  DDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRAKTYFDQA
           GG +  GDG      G+ + D +Y+KMIEA PG+ + L NYA+FLKEV+ D +KAEEYC RAIL  PNDGN L++Y +L+W+ H+D  RA+ YF+QA
Subjt:  DDDGGENWFGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRAKTYFDQA

Query:  VNSAPNDCYVLASYAKFLWDAGDEDESEEDE
        V +AP DCYV ASYA+FLWDA +E+E E++E
Subjt:  VNSAPNDCYVLASYAKFLWDAGDEDESEEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGAGCCGCGTCTATGTCCGTCTCCTGCGGCTCCCTAACGTGTAGAGCCTCCGTGAGTATGGCTTCTAATTCTGGAACATCGTTCTCGTCGCCGATTGTGGTGGA
AAGGAAAGGAGGCGAGGTTGAAGTTGAGGTTTCGGAGAGGTTGCGATTCGAGAAGTGTGTGGTGAAAACGGAATTGAGAGATGGATTGAGGATGGAGGAAGAGGAGCGTG
AAGATTTTGAGGTGGAATCCGCGGAGGCGAAGGCGCCGGAGGTTCTGGTTGGTGGCGGAGTTGGGAGCGGAAGAGGCGGAGGCGGCGATGACGACGGCGGTGAAAATTGG
TTCGGGGATGGATATGGAGATTCAGGTCGGGGAAATGGAAGTATGGACGAGTATTATCAGAAGATGATCGAAGCTTATCCTGGCGATGCACTAATTCTAGGCAATTACGC
GAGGTTTCTGAAGGAGGTGAAAGGGGACGTAGTGAAAGCAGAAGAGTACTGTGAGAGAGCCATTTTGGCAAAGCCAAATGATGGGAATGCTTTATCTCTCTATGGAGATT
TGATATGGCAAACTCATAGAGATGGGGATCGAGCTAAGACCTACTTTGATCAAGCTGTTAATTCAGCTCCTAATGACTGTTATGTTCTGGCTTCATATGCTAAGTTTCTG
TGGGATGCTGGAGATGAAGATGAGTCTGAAGAAGATGAAGTAGAGATTACTAAAACAAACACACAGTCTGAAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGAGCCGCGTCTATGTCCGTCTCCTGCGGCTCCCTAACGTGTAGAGCCTCCGTGAGTATGGCTTCTAATTCTGGAACATCGTTCTCGTCGCCGATTGTGGTGGA
AAGGAAAGGAGGCGAGGTTGAAGTTGAGGTTTCGGAGAGGTTGCGATTCGAGAAGTGTGTGGTGAAAACGGAATTGAGAGATGGATTGAGGATGGAGGAAGAGGAGCGTG
AAGATTTTGAGGTGGAATCCGCGGAGGCGAAGGCGCCGGAGGTTCTGGTTGGTGGCGGAGTTGGGAGCGGAAGAGGCGGAGGCGGCGATGACGACGGCGGTGAAAATTGG
TTCGGGGATGGATATGGAGATTCAGGTCGGGGAAATGGAAGTATGGACGAGTATTATCAGAAGATGATCGAAGCTTATCCTGGCGATGCACTAATTCTAGGCAATTACGC
GAGGTTTCTGAAGGAGGTGAAAGGGGACGTAGTGAAAGCAGAAGAGTACTGTGAGAGAGCCATTTTGGCAAAGCCAAATGATGGGAATGCTTTATCTCTCTATGGAGATT
TGATATGGCAAACTCATAGAGATGGGGATCGAGCTAAGACCTACTTTGATCAAGCTGTTAATTCAGCTCCTAATGACTGTTATGTTCTGGCTTCATATGCTAAGTTTCTG
TGGGATGCTGGAGATGAAGATGAGTCTGAAGAAGATGAAGTAGAGATTACTAAAACAAACACACAGTCTGAAATGTAA
Protein sequenceShow/hide protein sequence
MIRAASMSVSCGSLTCRASVSMASNSGTSFSSPIVVERKGGEVEVEVSERLRFEKCVVKTELRDGLRMEEEEREDFEVESAEAKAPEVLVGGGVGSGRGGGGDDDGGENW
FGDGYGDSGRGNGSMDEYYQKMIEAYPGDALILGNYARFLKEVKGDVVKAEEYCERAILAKPNDGNALSLYGDLIWQTHRDGDRAKTYFDQAVNSAPNDCYVLASYAKFL
WDAGDEDESEEDEVEITKTNTQSEM