CuGenDBv2

Gene ID	Lag0037249
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Coatomer subunit zeta
Genome location	chr2:4598751..4604349
RNA-Seq Expression	Lag0037249
Synteny	Lag0037249
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process) GO:0006891 - intra-Golgi vesicle-mediated transport (biological process) GO:0000139 - Golgi membrane (cellular component) GO:0030126 - COPI vesicle coat (cellular component)
InterPro domains	IPR011012 - Longin-like domain superfamily IPR022775 - AP complex, mu/sigma subunit IPR039652 - Coatomer subunit zeta

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038809.1 SNARE-like superfamily protein [Cucumis melo var. makuwa]

1.2e-74

97.28

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_004136347.1 TSET complex member tstD [Cucumis sativus]

1.2e-74

97.96

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_008466411.1 PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo]

9.4e-75

97.96

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_022936551.1 uncharacterized protein LOC111443125 [Cucurbita moschata]

1.2e-74

97.96

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTER FLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_038896955.1 TSET complex member tstD [Benincasa hispida]

2.1e-74

97.28

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        +PTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHA5 Coatomer subunit zeta

6.0e-75

97.96

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A1S3CRC6 Coatomer subunit zeta

4.6e-75

97.96

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A5A7TBS4 Coatomer subunit zeta

6.0e-75

97.28

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGD+AVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A5D3E691 Coatomer subunit zeta

4.6e-75

97.96

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEEL+VASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A6J1IMX0 Coatomer subunit zeta

6.0e-75

97.96

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Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLK AKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFV+TSSIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTER FLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

SwissProt top hits

e value

%identity

Alignment

C0HLF1 TSET complex member tstD

5.1e-15

32.64

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Query:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDAC-
        M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V        V+T +GD+ +++ G +E DELAL++V F I  S+KD C 
Subjt:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDAC-

Query:  GKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLK
         K  TE+ F+++  K  L LDEI+  G L+  + + I+    LK
Subjt:  GKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLK

Q5NA06 Coatomer subunit zeta-3

3.7e-05

25.95

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Query:  VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTE
        +L+ +S G  +  +++          ++F   + A   K +   E  +    S ++VY  + D+  +V G DE +EL LA V+   + +I          
Subjt:  VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGKAPTE

Query:  RLFLDKYGKICLCLDEIVWTGILENTEKDRI
        R  L+    I LCLDE+V  GI+  T+   I
Subjt:  RLFLDKYGKICLCLDEIVWTGILENTEKDRI

Arabidopsis top hits

e value

%identity

Alignment

AT1G15370.1 SNARE-like superfamily protein

2.4e-68

80.82

Show/hide

Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK
        M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLK  KNEEL VA HKSVYIVYT+LGDV++++VGKDEYDELALAE I++IT+++KD CGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSSIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNE
         PTER+FLDKYG+ICLCLDEIVW G+LENT+KDRIKRLIRLKPP+E
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNE

Sequences

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CDS sequence

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ATGAGGCGACGGCGACTTACAGAGCTTCGACTTCGGCGAAAACCCACGAGGACGAGGCCGCCTCGACATTTTCTTCTTCTTCTTTTTCGACCTCGTCGACGACTTACAGA
GCTTCGACCTCGTTGGTTTCTTCTTCTTCTTCTTACAGAGCTTCCCGACGGCGGTGACTTCGACGATAACCCACGAAAGGAGGAGGCGGCGAAGACTTACAGAGCTTCAA
AGCGGCGACGATTTACGGAGCTTCAAGGTGGCGGAGACTTCGACGAGAACCCACGAGAGGAGGAGGCGGCGACGACTTTGGCGAAACGAAAACCACGATACAAATCTCAA
CCACAAAACCCTAAATCAAAACTCCGATCGAACAGTTTAGACGGCGAAAGATCAGGCATGTTGCTTGCCGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAACG
GTTTCATGGAGTTCCGGCGGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCAGATAATCTCAAAGCTGCAAAAAATGAAGAACTCTTTGTTGCTTCAC
ACAAGTCTGTATATATTGTATACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTTGGGAAGGATGAATATGATGAATTAGCTTTGGCAGAAGTGATCTTTGTAATAACA
TCATCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTTGACAAATATGGAAAGATTTGTTTATGTCTTGATGAAATTGTCTGGACGGGCATCTTGGA
AAACACCGAGAAAGACCGAATCAAGAGGCTGATAAGGTTAAAGCCTCCAAATGAGTTTTGA

mRNA sequence

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Protein sequence

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MRRRRLTELRLRRKPTRTRPPRHFLLLLFRPRRRLTELRPRWFLLLLLTELPDGGDFDDNPRKEEAAKTYRASKRRRFTELQGGGDFDENPREEEAATTLAKRKPRYKSQ
PQNPKSKLRSNSLDGERSGMLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKAAKNEELFVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVIT
SSIKDACGKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

Lag0037249 (gene) of Sponge gourd (AG-4) v1 genome