; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037272 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037272
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTFIIS central domain-containing protein
Genome locationchr2:4742955..4745838
RNA-Seq ExpressionLag0037272
SyntenyLag0037272
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591588.1 PHD finger protein 3, partial [Cucurbita argyrosperma subsp. sororia]7.3e-15685.39Show/hide
Query:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV
        MQSSQLDPI NKMESSLSEAQRGVVVSSND SLHQYLVPNRQ+ELM SI+GGSL Q G+VS MQTG +DVKAGNFGQQQFQ+P N FGGTG+MLR AEGV
Subjt:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV

Query:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS
        LSLP+KRKA IEPFN LSQQ  LHNKRVA MEHRPWLQQ SGIA+RPPLQIPNNAPAP SMHSPAG KRKVQQMESHPTKV HQR TASKGQSAPL PTS
Subjt:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS

Query:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
        KIQNEPTGSVRSKMRESLTAALALV+QQQDK  N EKS  TEAEKSA  +Q +++ S    GHVSDDSKK+FSEKLDSVGLEDNVGKMLDKSSLCVNVSD
Subjt:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD

Query:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        LE LRYDGRVFQ NN LSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
Subjt:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

KAG7024477.1 PHD finger protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-15685.39Show/hide
Query:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV
        MQSSQLDPI NKMESSLSEAQRGVVVSSND SLHQYLVPNRQ+ELM SI+GGSL Q G+VS MQTG +DVKAGNFGQQQFQ+P N FGGTG+MLR AEGV
Subjt:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV

Query:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS
        LSLP+KRKA IEPFN LSQQ  LHNKRVA MEHRPWLQQ SGIA+RPPLQIPNNAPAP SMHSPAG KRKVQQMESHPTKV HQR TASKGQSAPL PTS
Subjt:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS

Query:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
        KIQNEPTGSVRSKMRESLTAALALV+QQQDK  N EKS  TEAEKSA  +Q +++ S    GHVSDDSKK+FSEKLDSVGLEDNVGKMLDKSSLCVNVSD
Subjt:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD

Query:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        LE LRYDGRVFQ NN LSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
Subjt:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

XP_004136468.2 death-inducer obliterator 1 [Cucumis sativus]4.1e-15985.96Show/hide
Query:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV
        MQSSQLDPITNKM+SSLSEA RGV VSS+DPS+HQYLVPNRQ+ELMESISGGSLTQ G++SRMQ GQVDVK GNFG+Q FQIPDNQFGGTGNM+R AEG+
Subjt:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV

Query:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS
        LSLPVKRKA  EP NSL+QQ  LHNKRVA MEHRPWLQ ASGIAKRP LQIPNN+PAP  M+SPAGTKRKVQQMESHPTKVGHQRS +SKGQ+AP TPTS
Subjt:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS

Query:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
        KIQNEPTGSVRSKMRESLTAALALVSQQ+DKSSNDEKS PTEAEK +T KQ ++LSS    GHVSDDS+KIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
Subjt:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD

Query:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        L+ LRYDGRVFQPNN LSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
Subjt:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

XP_016903543.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103503799 [Cucumis melo]1.1e-15986.53Show/hide
Query:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV
        MQSSQLDPITNKMESSLSEA RGV VSS+DPS+HQYLVPNRQ+ELMESISG SLTQ G++S MQ GQVDVK GNFG+Q FQIPDNQFGGTGNM+R AEG+
Subjt:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV

Query:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS
        LSLPVKRKA  EP NSL+QQ  LHNKRVA MEHRPWLQ ASGIAKRP LQIPNN+PAP  MHSPAGTKRKVQQMESHPTKVGHQRS +SKGQ+AP TPTS
Subjt:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS

Query:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
        KIQNEPTGSVRSKMRESLTAALALVSQQ+DKSSNDEKSP TEAEKSA  KQ  +LSS    GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
Subjt:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD

Query:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        L+ LRYDGRVFQPNN LSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
Subjt:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

XP_023535591.1 death-inducer obliterator 1-like [Cucurbita pepo subsp. pepo]2.8e-15584.81Show/hide
Query:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV
        MQSSQLDPI NKMESSLSEAQRGVVVSSN+ SLHQYLVPNRQ+ELM SI+GGSL+Q G+VS MQTG +DVKAGNFGQQQFQ+P N FGGTG+MLR AEGV
Subjt:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV

Query:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS
        LSLP+KRKA IEPFN LSQQ  LHNKRVA MEHRPWLQQ SGIA+RPPLQIPNNAPAP SMHSPAG KRKVQQMESHPTKV HQR TASKGQSAPL PTS
Subjt:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS

Query:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
        KIQNEPTGSVRSKMRESLTAALALV+QQQDK  NDEKS  TEAEKSA  +Q +++ S    GHVSDDSKK+FSE LDSVGLEDNVGKMLDKSSLCVNVS+
Subjt:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD

Query:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        LE LRYDGRVFQ NN LSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
Subjt:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

TrEMBL top hitse value%identityAlignment
A0A0A0LDR1 TFIIS central domain-containing protein2.0e-15985.96Show/hide
Query:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV
        MQSSQLDPITNKM+SSLSEA RGV VSS+DPS+HQYLVPNRQ+ELMESISGGSLTQ G++SRMQ GQVDVK GNFG+Q FQIPDNQFGGTGNM+R AEG+
Subjt:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV

Query:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS
        LSLPVKRKA  EP NSL+QQ  LHNKRVA MEHRPWLQ ASGIAKRP LQIPNN+PAP  M+SPAGTKRKVQQMESHPTKVGHQRS +SKGQ+AP TPTS
Subjt:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS

Query:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
        KIQNEPTGSVRSKMRESLTAALALVSQQ+DKSSNDEKS PTEAEK +T KQ ++LSS    GHVSDDS+KIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
Subjt:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD

Query:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        L+ LRYDGRVFQPNN LSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
Subjt:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

A0A1S4E5N9 LOW QUALITY PROTEIN: uncharacterized protein LOC1035037995.2e-16086.53Show/hide
Query:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV
        MQSSQLDPITNKMESSLSEA RGV VSS+DPS+HQYLVPNRQ+ELMESISG SLTQ G++S MQ GQVDVK GNFG+Q FQIPDNQFGGTGNM+R AEG+
Subjt:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV

Query:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS
        LSLPVKRKA  EP NSL+QQ  LHNKRVA MEHRPWLQ ASGIAKRP LQIPNN+PAP  MHSPAGTKRKVQQMESHPTKVGHQRS +SKGQ+AP TPTS
Subjt:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS

Query:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
        KIQNEPTGSVRSKMRESLTAALALVSQQ+DKSSNDEKSP TEAEKSA  KQ  +LSS    GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
Subjt:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD

Query:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        L+ LRYDGRVFQPNN LSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
Subjt:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

A0A5D3E666 PHD finger protein 32.8e-15386.05Show/hide
Query:  MESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGVLSLPVKRKAMIE
        MESSLSEA RGV VSS+DPS+HQYLVPNRQ+ELMESISG SLTQ G++S MQ GQVDVK GNFG+Q FQIPDNQFGGTGNM+R AEG+LSLPVKRKA  E
Subjt:  MESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGVLSLPVKRKAMIE

Query:  PFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTSKIQNEPTGSVRS
        P NSL+QQ  LHNKRVA MEHRPWLQ ASGIAKRP LQIPNN+PAP  MHSPAGTKRKVQQMESHPTKVGHQRS +SKGQ+AP TPTSKIQNEPTGSVRS
Subjt:  PFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTSKIQNEPTGSVRS

Query:  KMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSDLETLRYDGRVFQ
        KMRESLTAALALVSQQ+DKSSNDEKSP TEAEKSA  KQ  +LSS    GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSDL+ LRYDGRVFQ
Subjt:  KMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSDLETLRYDGRVFQ

Query:  PNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        PNN LSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
Subjt:  PNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

A0A6J1C325 uncharacterized protein LOC1110079001.4e-15283.43Show/hide
Query:  NNLVAEEYSIPGMQSSQLDPITNKMESSLSEAQRGVVVS-SNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQF
        NNLV+EEYSI GMQSSQLDPITNKMESSLSEAQRGVVVS SN+PSLHQYLVPNRQ+ELM SISGGSL+Q GIVSRMQTGQVDVKA NFGQQQFQIP NQF
Subjt:  NNLVAEEYSIPGMQSSQLDPITNKMESSLSEAQRGVVVS-SNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQF

Query:  GGTGNMLRAAEGVLSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRST
        G TGNM+R AEG LSLPVKRKA +EPFNSL QQPSL NKR AQMEHRPWLQQASG+A+RPPLQIPN++PA  S+HSPA +KRKV QME HP+KV HQRS 
Subjt:  GGTGNMLRAAEGVLSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRST

Query:  ASKGQSAPLTPTSKIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGK
        ASK  SA    +SKIQNE TG VRSKMRESLTAALALVSQQ DKSSN+EKS  TEA KS TQKQ + L S    GHVSDDSKKIFSEKLDSVGLEDNVGK
Subjt:  ASKGQSAPLTPTSKIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGK

Query:  MLDKSSLCVNVSDLETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        MLDKSSL VNVSDLETLRYDGRVFQPNNGLSYEDI FGDNFFIKDDLLQENGL+WVL+ADLG
Subjt:  MLDKSSLCVNVSDLETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

A0A6J1IMJ5 death-inducer obliterator 1-like1.8e-15284.24Show/hide
Query:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV
        MQS QLDPI+NKMESSLSEAQRGVVVSSND SLHQYLVPNRQ+ELM SI+GGSL Q G+VS MQTG +DVKAGNFGQQQFQ+P N FGGTG+MLR AEGV
Subjt:  MQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIELMESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGV

Query:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS
        LSLP+KRKA IE FN LSQQ  LHNKRVA MEHRPWL Q SGIA+RPPLQIPNN  AP SMHSPAG KRKVQQMESHPTKV HQR TASKGQSAPL PTS
Subjt:  LSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTS

Query:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD
        KIQNEPTGSVRSKMRESLTAALALV+QQQDK  NDEKS  TEAEKSA  +Q +++ S    GHVSDDSKK+FSEKLDSVGLEDNVGKMLDKSSLCVNVSD
Subjt:  KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSS----GHVSDDSKKIFSEKLDSVGLEDNVGKMLDKSSLCVNVSD

Query:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
        LE LRYDGRVFQ NN LSYEDISFGDNFFIKDDLLQENGLSWVLEADLG
Subjt:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25640.1 SPOC domain / Transcription elongation factor S-II protein2.0e-1031.85Show/hide
Query:  LPVKRKAMIEPFNSLSQQPSLHNKRVA-QMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTSK
        LP KRK+ +         PS+ NKR+A  ME RPW           P+ +  ++ +P + + PA    K   +    +K G Q +        P+    K
Subjt:  LPVKRKAMIEPFNSLSQQPSLHNKRVA-QMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTSK

Query:  IQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSSGHVSDDS---KKIFSEKLDSVGLED--NVGKMLDKSSLCVNVSD
         Q+E +GSVRSKMRESL  ALA+V  Q D  +   +S   ++E  A   +G    SG VS  S     + +   + + L D   V  +  ++ L   +S 
Subjt:  IQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSSGHVSDDS---KKIFSEKLDSVGLED--NVGKMLDKSSLCVNVSD

Query:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADL
         +T   D +V +       +++S+ DN F KDDLLQ N LSW LE+D+
Subjt:  LETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADL

AT5G11430.1 SPOC domain / Transcription elongation factor S-II protein3.2e-0830.28Show/hide
Query:  GVLSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTP
        G + L  K K++ +            NK+V     RPWLQQ S  A    L IP    +  ++HS    K K  Q ES P K    +   +K Q  P   
Subjt:  GVLSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTP

Query:  TS-KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSSGHVSDDSKKIFSEKLDSV--GLEDNVGKMLDKSSLCVNVS
         S K   E   SVRSKMRESL +ALALV +  D     E     E     TQ+   +      +  S  +    +  +   +E +V K    S + V++ 
Subjt:  TS-KIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSSGHVSDDSKKIFSEKLDSV--GLEDNVGKMLDKSSLCVNVS

Query:  DLETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLE-ADLG
          + ++++    Q +     +++ F D  F  DDLL  N LSW LE +DLG
Subjt:  DLETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLE-ADLG

AT5G25520.1 SPOC domain / Transcription elongation factor S-II protein1.2e-1530.64Show/hide
Query:  MQSSQLDPITNKMES-SLSEAQRGVVVSSND-PSLHQYLVPNRQIELMESISGGSLT---QGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLR
        M +  +D  T K +S +  E     +V SND PSL    V   + E ME    G L+   +   VS   +  VD ++      Q Q+P +          
Subjt:  MQSSQLDPITNKMES-SLSEAQRGVVVSSND-PSLHQYLVPNRQIELMESISGGSLT---QGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLR

Query:  AAEGVLSLPVKRKAMIEPF---NSLSQQPSLHNKRVAQMEHRPWLQQ-ASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKG
        +  G      KRK+  E     ++ S++    NKRV  + HRPWL+Q  S   +R  +  P      T  H P   K KV+QME    K G Q    +K 
Subjt:  AAEGVLSLPVKRKAMIEPF---NSLSQQPSLHNKRVAQMEHRPWLQQ-ASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKG

Query:  QSAPLTPTSKIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSSG---HVSDDSKKIFSEKLDSVGLEDNVGKMLDKS
        Q+     + K  N+   S+RSKM+ESL AALALV + ++     + S   EA          A + G    V +D     S + +S   ++  G+ L + 
Subjt:  QSAPLTPTSKIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSSG---HVSDDSKKIFSEKLDSVGLEDNVGKMLDKS

Query:  SL------CVNVSDLETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLE
        S        VN SD++  ++D  VF        +D+ F D+ F  D+LLQ NGLSWVLE
Subjt:  SL------CVNVSDLETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLE

AT5G25520.2 SPOC domain / Transcription elongation factor S-II protein1.2e-1530.64Show/hide
Query:  MQSSQLDPITNKMES-SLSEAQRGVVVSSND-PSLHQYLVPNRQIELMESISGGSLT---QGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLR
        M +  +D  T K +S +  E     +V SND PSL    V   + E ME    G L+   +   VS   +  VD ++      Q Q+P +          
Subjt:  MQSSQLDPITNKMES-SLSEAQRGVVVSSND-PSLHQYLVPNRQIELMESISGGSLT---QGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLR

Query:  AAEGVLSLPVKRKAMIEPF---NSLSQQPSLHNKRVAQMEHRPWLQQ-ASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKG
        +  G      KRK+  E     ++ S++    NKRV  + HRPWL+Q  S   +R  +  P      T  H P   K KV+QME    K G Q    +K 
Subjt:  AAEGVLSLPVKRKAMIEPF---NSLSQQPSLHNKRVAQMEHRPWLQQ-ASGIAKRPPLQIPNNAPAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKG

Query:  QSAPLTPTSKIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSSG---HVSDDSKKIFSEKLDSVGLEDNVGKMLDKS
        Q+     + K  N+   S+RSKM+ESL AALALV + ++     + S   EA          A + G    V +D     S + +S   ++  G+ L + 
Subjt:  QSAPLTPTSKIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSSG---HVSDDSKKIFSEKLDSVGLEDNVGKMLDKS

Query:  SL------CVNVSDLETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLE
        S        VN SD++  ++D  VF        +D+ F D+ F  D+LLQ NGLSWVLE
Subjt:  SL------CVNVSDLETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTGACACGTGGCGGCGAAGCTTGTATCGCCATCGTCGTCACTCTTCTCTCTGCAATTCTTGATCTGGCGACCTTTTCTCACTGGCACTGCGTTCGTCGCGCCGT
TTACGGCTTCCGGGTTCGTGCTGTGTCGGATGATTTGTGTATCCTGGTCAACAATCTTGTTGCTGAAGAATATTCAATACCAGGAATGCAAAGTAGTCAATTGGACCCTA
TAACAAACAAAATGGAATCGTCATTATCCGAAGCCCAAAGAGGGGTTGTAGTTTCTTCCAACGATCCTTCTTTGCATCAATATTTAGTACCTAACAGGCAAATAGAACTA
ATGGAATCAATTTCTGGTGGCTCTCTAACTCAAGGTGGAATAGTTTCACGCATGCAAACAGGACAGGTTGATGTTAAAGCTGGCAATTTTGGACAACAACAATTTCAAAT
ACCTGACAATCAATTTGGAGGGACTGGAAACATGCTGAGAGCTGCAGAAGGGGTGCTTTCACTTCCTGTGAAGAGGAAGGCAATGATCGAGCCATTTAACTCTCTCTCAC
AGCAGCCTTCATTGCATAATAAGCGAGTTGCACAGATGGAACATCGACCATGGTTGCAACAAGCATCTGGAATAGCCAAAAGACCTCCTTTACAAATACCAAACAATGCC
CCAGCTCCCACATCGATGCATTCCCCTGCAGGAACTAAGAGAAAGGTACAGCAAATGGAATCACATCCAACAAAAGTTGGACATCAACGTTCCACTGCTTCCAAAGGCCA
GAGTGCTCCGCTGACTCCAACTTCCAAAATACAAAATGAGCCAACTGGATCTGTGAGGTCAAAGATGAGGGAATCCTTGACAGCTGCGTTAGCCTTGGTATCTCAGCAGC
AAGACAAATCATCTAATGATGAAAAAAGTCCTCCAACTGAGGCTGAAAAGTCTGCAACCCAAAAGCAGGGTAGTGCTTTATCATCTGGTCATGTATCTGATGACTCGAAG
AAAATCTTTTCTGAAAAATTAGATTCTGTTGGTCTTGAAGACAATGTAGGAAAGATGTTAGATAAGAGTTCGCTATGTGTAAATGTTAGTGATTTAGAGACATTGAGATA
TGATGGACGAGTCTTTCAACCGAATAATGGTTTGTCTTATGAAGACATTTCTTTTGGGGACAACTTTTTTATTAAAGATGATCTTTTGCAAGAAAATGGTCTCTCTTGGG
TACTGGAGGCTGATTTAGGGGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTGACACGTGGCGGCGAAGCTTGTATCGCCATCGTCGTCACTCTTCTCTCTGCAATTCTTGATCTGGCGACCTTTTCTCACTGGCACTGCGTTCGTCGCGCCGT
TTACGGCTTCCGGGTTCGTGCTGTGTCGGATGATTTGTGTATCCTGGTCAACAATCTTGTTGCTGAAGAATATTCAATACCAGGAATGCAAAGTAGTCAATTGGACCCTA
TAACAAACAAAATGGAATCGTCATTATCCGAAGCCCAAAGAGGGGTTGTAGTTTCTTCCAACGATCCTTCTTTGCATCAATATTTAGTACCTAACAGGCAAATAGAACTA
ATGGAATCAATTTCTGGTGGCTCTCTAACTCAAGGTGGAATAGTTTCACGCATGCAAACAGGACAGGTTGATGTTAAAGCTGGCAATTTTGGACAACAACAATTTCAAAT
ACCTGACAATCAATTTGGAGGGACTGGAAACATGCTGAGAGCTGCAGAAGGGGTGCTTTCACTTCCTGTGAAGAGGAAGGCAATGATCGAGCCATTTAACTCTCTCTCAC
AGCAGCCTTCATTGCATAATAAGCGAGTTGCACAGATGGAACATCGACCATGGTTGCAACAAGCATCTGGAATAGCCAAAAGACCTCCTTTACAAATACCAAACAATGCC
CCAGCTCCCACATCGATGCATTCCCCTGCAGGAACTAAGAGAAAGGTACAGCAAATGGAATCACATCCAACAAAAGTTGGACATCAACGTTCCACTGCTTCCAAAGGCCA
GAGTGCTCCGCTGACTCCAACTTCCAAAATACAAAATGAGCCAACTGGATCTGTGAGGTCAAAGATGAGGGAATCCTTGACAGCTGCGTTAGCCTTGGTATCTCAGCAGC
AAGACAAATCATCTAATGATGAAAAAAGTCCTCCAACTGAGGCTGAAAAGTCTGCAACCCAAAAGCAGGGTAGTGCTTTATCATCTGGTCATGTATCTGATGACTCGAAG
AAAATCTTTTCTGAAAAATTAGATTCTGTTGGTCTTGAAGACAATGTAGGAAAGATGTTAGATAAGAGTTCGCTATGTGTAAATGTTAGTGATTTAGAGACATTGAGATA
TGATGGACGAGTCTTTCAACCGAATAATGGTTTGTCTTATGAAGACATTTCTTTTGGGGACAACTTTTTTATTAAAGATGATCTTTTGCAAGAAAATGGTCTCTCTTGGG
TACTGGAGGCTGATTTAGGGGGGTAG
Protein sequenceShow/hide protein sequence
MWLTRGGEACIAIVVTLLSAILDLATFSHWHCVRRAVYGFRVRAVSDDLCILVNNLVAEEYSIPGMQSSQLDPITNKMESSLSEAQRGVVVSSNDPSLHQYLVPNRQIEL
MESISGGSLTQGGIVSRMQTGQVDVKAGNFGQQQFQIPDNQFGGTGNMLRAAEGVLSLPVKRKAMIEPFNSLSQQPSLHNKRVAQMEHRPWLQQASGIAKRPPLQIPNNA
PAPTSMHSPAGTKRKVQQMESHPTKVGHQRSTASKGQSAPLTPTSKIQNEPTGSVRSKMRESLTAALALVSQQQDKSSNDEKSPPTEAEKSATQKQGSALSSGHVSDDSK
KIFSEKLDSVGLEDNVGKMLDKSSLCVNVSDLETLRYDGRVFQPNNGLSYEDISFGDNFFIKDDLLQENGLSWVLEADLGG