; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037305 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037305
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationchr2:5019317..5023879
RNA-Seq ExpressionLag0037305
SyntenyLag0037305
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591621.1 Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. sororia]2.4e-13190.41Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSSS K RE PGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+H+RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYST+DEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]1.8e-13190.77Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSSS K RE PGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+H+RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]3.7e-13290.77Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSSS K RE PGLVP TVKQISEASHSGEEKANF+INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+H+RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_023524340.1 replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo]3.7e-13291.11Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSS +K RE PG+VPVTVKQISEASHSGEEKANF+INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQH
        DTKQMDEIQDGMY+RV GHLKIFQSNKQ+FAFSVRPVTNFDEITFHFIECIHDH+RNSKLQPNG  STQ QSSDSS+K  VQSGSSGYQTASSGLSS+QH
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQH

Query:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        TVDVKKNCDELVLDYLQLPSSVAKERGIHRDEL+QQLKIPLEKI++SIRSLEDEGLIYSTIDE+HFKSAA
Subjt:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_038897330.1 replication protein A 32 kDa subunit A-like [Benincasa hispida]4.5e-13089.3Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFS +QFDS SGFTSSQT DSSS K RE+PGLVPVTVKQISEASHSGEEKANF++NGVDITNV IVGKVSEKAERNTDITFTVDDGTG IGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQM+EIQDGMY+RVNGHLKIFQSNKQ+FAFSVRPVTNFDEITFHFIECIHDH+RNSKLQ  NG G TQ QSSDS +KTPVQ+GSSG+QTASSG+ SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein5.0e-12786.35Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSS+QFDS SGFTSSQT DSSS K RE+PGL+PVTVKQISEASHSGEEKANF+INGVDITNVTIVGKVSEKAERNTDITFTVDDGTG IGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DT QM+EIQDGMY+RVNGHLK+FQSNKQ+FAFSVRPVTNFDEITFHFIECIHDH+RNSKLQ   G GSTQ Q+SDS +KTPVQ+GS+GY T SS + SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDELVLDYLQLPSSVAKERGIH+DEL+QQLK+P+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like2.7e-12887.82Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSS+QFDSGSGFTSSQT DSSS K RE+PGLVPVTVKQISEASHSGEEKANF+IN VDITNVTIVGKVSEKAERNTDITFTVDDGTG IGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQM+EIQDGMY+RVNGHLK+FQSNKQ+FAFSVRPVTNFDEITFHF+ECIHDH+RNSKLQ   G GSTQ Q+SDS +KTPVQ+GSSGY T SS + SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDELVLDYLQLPSSVAKERGIHRDEL+QQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A1.9e-12688.15Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQ  DS+S K RE+PGLVPVTVKQISEA HSGEEKANF+INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQH
        DTKQMD+IQDGMYIRVNGHLKIFQ N Q+FAFSVRPVTN DEITFHFIECIHD++RNSKLQ NGV STQ QSSDS++   VQSGSSGYQTASS LSS QH
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQH

Query:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        TVDVKKN D+LVLDYLQLPSSVAKE+GIHRDEL+QQLKIPLEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  TVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like1.8e-13290.77Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFTSSQT DSSS K RE PGLVP TVKQISEASHSGEEKANF+INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+H+RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTASS L SEQ
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQ

Query:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like8.3e-13089.74Show/hide
Query:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF
        MFSSSQFDSGSGFT SQT DSSS K RE PGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTGRIGCKRWVND F
Subjt:  MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAF

Query:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTAS--SGLSS
        DTKQMDEIQDGMYIRVNGHLKIFQSNKQ+FAFSVRP+TNFDEITFHFIECIH+H+RNSKLQ  NGVGSTQ QSSDS +KTP+Q+GSSGYQTAS  S L S
Subjt:  DTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQP-NGVGSTQPQSSDSSLKTPVQSGSSGYQTAS--SGLSS

Query:  EQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCD+L+LDYLQLPSSVAKERGIHRDEL+QQLKIP+EKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C1.3e-2336.17Show/hide
Query:  SGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEA-----SHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTK
        S +G  ++     S  +     G VP TV  IS +     +  G     F I+GV+ TNV ++G+V     R+TD+ FT+DD TG+I   RW+ D  DT+
Subjt:  SGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEA-----SHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTK

Query:  QMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRN--SKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ
            IQ+G+Y++V  +L  FQ+ KQ  A S+RP+ NF+E+  HFIEC+H H+ +  SK+Q     S Q   ++     P   G   YQ
Subjt:  QMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRN--SKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ

Q6H7J5 Replication protein A 32 kDa subunit B1.5e-4336.04Show/hide
Query:  SSSQFDSGSGFTSSQTTDSSS---------TKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCK
        ++S    G GF  SQ T+++           K R A  L+P+TVKQI +AS + ++K+NF +NG++++ V +VG++  K +R TD++FT+DDGTGR+   
Subjt:  SSSQFDSGSGFTSSQTTDSSS---------TKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCK

Query:  RWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMR--------NSKLQPNGVGSTQPQSSDSSLKTPVQSGS
        RW ND+ DTK+M +IQ+G Y+ VNG LK FQ  +QV A+SVR +TNF+++T HF+ C+H H+         N+         T P+ S +  ++P+ + +
Subjt:  RWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMR--------NSKLQPNGVGSTQPQSSDSSLKTPVQSGS

Query:  SGYQTASSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKS
        S +       S+ Q+T     N  +LVL+    P+ +  + G+  D ++++L +P E +   I    D G +Y+TID+ H+KS
Subjt:  SGYQTASSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKS

Q6K9U2 Replication protein A 32 kDa subunit A2.4e-4943.77Show/hide
Query:  MFSSSQFD--SGSGFTSSQTTDSSST---KGREAPGLVPVTVKQISEASHS---GEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGC
        M S SQ D  S S FTSSQ   + ST   K R A   +P+TVKQISEA  S   GE+ A F+++GV+  NV +VG VS K ERNTD++FT+DDGTGR+  
Subjt:  MFSSSQFD--SGSGFTSSQTTDSSST---KGREAPGLVPVTVKQISEASHS---GEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGC

Query:  KRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTAS
         RWVND  D+ +   +Q+GMY+ V G LK  Q  K+  AF++RPVT+++E+T HFI+C+  H+ N+K Q   +GS  P  + S++ +   +G S   T +
Subjt:  KRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTAS

Query:  SGLSSEQHTVDV----KKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSA
        S  S+    + V    K + +  VL+  + P++V  E G+H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Subjt:  SGLSSEQHTVDV----KKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSA

Q8LFJ8 Replication protein A 32 kDa subunit B3.7e-5041.73Show/hide
Query:  FSSSQFDSGSGFTSSQTT-----DSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV
        F  +   +G GF  SQ T      SSS K R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQTT-----DSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV

Query:  NDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTAS
        +   +T++M+ ++ GMY+R++GHLKIFQ  + V  FSVRPVT+F+EI  HF EC++ HM N+KL+   +     + +PQ   S++ TP +     YQT  
Subjt:  NDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTAS

Query:  SGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        S     Q   D      + VL+YL  P  +  E G+H D +A++L+IPL ++  ++  L ++G IYST+DE  FKS A
Subjt:  SGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A2.5e-6748.93Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS+ K R+  GLVPVTVKQI+E   S  EK+  +ING+ +TNV++VG V +K E + T++ FT+DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR

Query:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ
        I CKRWV++ FD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q   VG         S+ T  Q GS+  Q
Subjt:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ

Query:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK
            +  +SS+ +  + +KN D+++LDYL+ P+  A+++GIH DE+AQQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A21.8e-6848.93Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS+ K R+  GLVPVTVKQI+E   S  EK+  +ING+ +TNV++VG V +K E + T++ FT+DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR

Query:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ
        I CKRWV++ FD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q   VG         S+ T  Q GS+  Q
Subjt:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ

Query:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK
            +  +SS+ +  + +KN D+++LDYL+ P+  A+++GIH DE+AQQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK

AT2G24490.2 replicon protein A21.8e-6848.93Show/hide
Query:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR
        MFSSSQF+     SG GF SSQ      + SS+ K R+  GLVPVTVKQI+E   S  EK+  +ING+ +TNV++VG V +K E + T++ FT+DDGTGR
Subjt:  MFSSSQFD-----SGSGFTSSQ-----TTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGR

Query:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ
        I CKRWV++ FD ++M+ ++DG Y+R++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q   VG         S+ T  Q GS+  Q
Subjt:  IGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQ

Query:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK
            +  +SS+ +  + +KN D+++LDYL+ P+  A+++GIH DE+AQQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  TA--SSGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFK

AT3G02920.1 Replication protein A, subunit RPA322.6e-5141.73Show/hide
Query:  FSSSQFDSGSGFTSSQTT-----DSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV
        F  +   +G GF  SQ T      SSS K R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW 
Subjt:  FSSSQFDSGSGFTSSQTT-----DSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWV

Query:  NDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTAS
        +   +T++M+ ++ GMY+R++GHLKIFQ  + V  FSVRPVT+F+EI  HF EC++ HM N+KL+   +     + +PQ   S++ TP +     YQT  
Subjt:  NDAFDTKQMDEIQDGMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTAS

Query:  SGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        S     Q   D      + VL+YL  P  +  E G+H D +A++L+IPL ++  ++  L ++G IYST+DE  FKS A
Subjt:  SGLSSEQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA

AT3G02920.2 Replication protein A, subunit RPA322.2e-5042.29Show/hide
Query:  SSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLK
        SS + R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW +   +T++M+ ++ GMY+R++GHLK
Subjt:  SSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTKQMDEIQDGMYIRVNGHLK

Query:  IFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQHTVDVKKNCDELVLDYLQ
        IFQ  + V  FSVRPVT+F+EI  HF EC++ HM N+KL+   +     + +PQ   S++ TP +     YQT  S     Q   D      + VL+YL 
Subjt:  IFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGV----GSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQHTVDVKKNCDELVLDYLQ

Query:  LPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA
         P  +  E G+H D +A++L+IPL ++  ++  L ++G IYST+DE  FKS A
Subjt:  LPSSVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCCTCTCAGACCACCGACTCCTCTTCAACTAAGGGTCGAGAAGCGCCGGGTTTGGTTCCAGTAACTGT
AAAGCAGATAAGTGAAGCTTCCCATTCTGGCGAAGAGAAGGCAAACTTTATAATCAATGGCGTCGACATTACAAATGTTACAATCGTTGGAAAGGTCTCTGAGAAAGCTG
AACGGAATACTGACATCACATTCACTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATGCTTTTGACACTAAGCAAATGGATGAAATTCAAGAT
GGAATGTATATACGGGTGAATGGGCATTTGAAAATATTTCAAAGCAACAAGCAAGTATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGATGAAATTACCTTCCACTT
CATTGAATGCATACATGACCACATGCGGAATTCCAAGTTACAGCCCAATGGAGTTGGATCGACACAGCCCCAATCCTCGGATTCCTCTTTGAAGACTCCTGTGCAGAGTG
GCTCGAGTGGGTATCAGACAGCATCTTCAGGACTGTCATCTGAGCAGCACACTGTTGATGTTAAAAAGAATTGTGATGAATTGGTCCTTGACTATCTGCAGCTGCCGTCC
AGCGTTGCAAAAGAAAGAGGAATACATAGAGATGAACTTGCCCAACAACTGAAAATTCCTTTGGAGAAAATACTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGAT
ATATTCCACCATAGATGAGTTTCATTTCAAATCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCCTCTCAGACCACCGACTCCTCTTCAACTAAGGGTCGAGAAGCGCCGGGTTTGGTTCCAGTAACTGT
AAAGCAGATAAGTGAAGCTTCCCATTCTGGCGAAGAGAAGGCAAACTTTATAATCAATGGCGTCGACATTACAAATGTTACAATCGTTGGAAAGGTCTCTGAGAAAGCTG
AACGGAATACTGACATCACATTCACTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATGCTTTTGACACTAAGCAAATGGATGAAATTCAAGAT
GGAATGTATATACGGGTGAATGGGCATTTGAAAATATTTCAAAGCAACAAGCAAGTATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGATGAAATTACCTTCCACTT
CATTGAATGCATACATGACCACATGCGGAATTCCAAGTTACAGCCCAATGGAGTTGGATCGACACAGCCCCAATCCTCGGATTCCTCTTTGAAGACTCCTGTGCAGAGTG
GCTCGAGTGGGTATCAGACAGCATCTTCAGGACTGTCATCTGAGCAGCACACTGTTGATGTTAAAAAGAATTGTGATGAATTGGTCCTTGACTATCTGCAGCTGCCGTCC
AGCGTTGCAAAAGAAAGAGGAATACATAGAGATGAACTTGCCCAACAACTGAAAATTCCTTTGGAGAAAATACTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGAT
ATATTCCACCATAGATGAGTTTCATTTCAAATCTGCTGCATAG
Protein sequenceShow/hide protein sequence
MFSSSQFDSGSGFTSSQTTDSSSTKGREAPGLVPVTVKQISEASHSGEEKANFIINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGRIGCKRWVNDAFDTKQMDEIQD
GMYIRVNGHLKIFQSNKQVFAFSVRPVTNFDEITFHFIECIHDHMRNSKLQPNGVGSTQPQSSDSSLKTPVQSGSSGYQTASSGLSSEQHTVDVKKNCDELVLDYLQLPS
SVAKERGIHRDELAQQLKIPLEKILNSIRSLEDEGLIYSTIDEFHFKSAA