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Lag0037348 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037348
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr2:5433009..5433311
RNA-Seq ExpressionLag0037348
SyntenyLag0037348
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3446462.1 hypothetical protein FNV43_RR11641 [Rhamnella rubrinervis]5.9e-1957.69Show/hide
Query:  MGIK-WRNSRSQSIRLGQSCV-SSNEQESKRVGWQILWQKIKKEK-KKIFSSSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPS-IVSRNL
        MGIK W  S SQSIRLGQ+ + S+N++E  + GW+ +W+KIK++K KK+FSS V  ++SY+PN Y  NFDQG+  +EPDNLSRSFSARFADP+ I     
Subjt:  MGIK-WRNSRSQSIRLGQSCV-SSNEQESKRVGWQILWQKIKKEK-KKIFSSSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPS-IVSRNL

Query:  RLLD
         LLD
Subjt:  RLLD

KAG6591653.1 hypothetical protein SDJN03_13999, partial [Cucurbita argyrosperma subsp. sororia]5.5e-3379.41Show/hide
Query:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRV-GWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRL
        MGIKWRNSRSQSIRLGQSC S NEQESKR+ GWQILWQK KKEK++IFS SSV+ RSSYNPNAY LNF+Q    S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRV-GWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

KGN60340.2 hypothetical protein Csa_000895 [Cucumis sativus]4.4e-3885.15Show/hide
Query:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRVGWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRLL
        MG+KWRNSRSQSIRLGQSCVSSNEQESKR+GWQILW+K+KKEK+K+FS SSV+ RSSYNPNAY LNFD+    SEPDNLSRSFSARFADPSIVSRNLRLL
Subjt:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRVGWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRLL

Query:  D
        D
Subjt:  D

XP_022936244.1 uncharacterized protein LOC111442916 [Cucurbita moschata]8.5e-3480.39Show/hide
Query:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRV-GWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRL
        MGIKWRNSRSQSIRLGQSC SSNEQESKR+ GWQILWQK KKEK++IFS SSV+ RSSYNPNAY LNF+Q    S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRV-GWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

XP_023536137.1 uncharacterized protein LOC111797385 [Cucurbita pepo subsp. pepo]8.5e-3480.39Show/hide
Query:  MGIKWRNSRSQSIRLGQSCVSSNEQESKR-VGWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRL
        MGIKWRNSRSQSIRLGQSC SSNEQESKR +GWQILWQK KKEK++IFS SSV+ RSSYNPNAY LNF+Q    S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGIKWRNSRSQSIRLGQSCVSSNEQESKR-VGWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

TrEMBL top hitse value%identityAlignment
A0A0A0LJH9 Uncharacterized protein2.1e-3885.15Show/hide
Query:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRVGWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRLL
        MG+KWRNSRSQSIRLGQSCVSSNEQESKR+GWQILW+K+KKEK+K+FS SSV+ RSSYNPNAY LNFD+    SEPDNLSRSFSARFADPSIVSRNLRLL
Subjt:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRVGWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRLL

Query:  D
        D
Subjt:  D

A0A251RD41 Uncharacterized protein3.7e-1959.05Show/hide
Query:  MGIK-WRNSRSQSIRLGQSCVSSNEQESKRVGWQILWQKIKKE-KKKIFSSS--VKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNL
        MGIK W NSRSQS+RLGQ  + SN  +  R GWQ  W+K K + KKK FSSS      +SY+P  Y  NFD+G+G  EPDNLSRSFSARFADPS++  N 
Subjt:  MGIK-WRNSRSQSIRLGQSCVSSNEQESKRVGWQILWQKIKKE-KKKIFSSS--VKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNL

Query:  R-LLD
        R LLD
Subjt:  R-LLD

A0A2N9H2U8 Uncharacterized protein2.4e-1853.4Show/hide
Query:  MGI-KWRNSRSQSIRLGQSCVSSNEQESKRVG--WQILWQKIKKEKKKIFSSSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLR
        MGI KW N RS+SI+LG+S   SN     +    W + W+KIK++KKK  SS +  +++Y+P  Y  NFD+G+G  EPDNLSRSFSARFADPS V R   
Subjt:  MGI-KWRNSRSQSIRLGQSCVSSNEQESKRVG--WQILWQKIKKEKKKIFSSSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLR

Query:  LLD
        LLD
Subjt:  LLD

A0A6J1F7R9 uncharacterized protein LOC1114429164.1e-3480.39Show/hide
Query:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRV-GWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRL
        MGIKWRNSRSQSIRLGQSC SSNEQESKR+ GWQILWQK KKEK++IFS SSV+ RSSYNPNAY LNF+Q    S+PD+L RSFSARFADPSIVSR+ RL
Subjt:  MGIKWRNSRSQSIRLGQSCVSSNEQESKRV-GWQILWQKIKKEKKKIFS-SSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRL

Query:  LD
        LD
Subjt:  LD

A0A6J5TRF8 Uncharacterized protein8.3e-1959.05Show/hide
Query:  MGIK-WRNSRSQSIRLGQSCVSSNEQESKRVGWQILWQKIKKE-KKKIFSSS--VKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPS-IVSRN
        MGIK W NSRSQSIRLGQ  +SSN  +  + GWQ  W+K K + KKK FSSS      +SY+P  Y  NFD G+G  EPDNLSR FSARFADPS I+ +N
Subjt:  MGIK-WRNSRSQSIRLGQSCVSSNEQESKRVGWQILWQKIKKE-KKKIFSSS--VKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPS-IVSRN

Query:  LRLLD
          LLD
Subjt:  LRLLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25735.1 unknown protein1.5e-0738.24Show/hide
Query:  NSRSQSIRLGQSCVSSNEQESKR------VGWQILWQKIKKEKKKIFSSSVKFRSSYNPNAYELNFDQGIGC---SEPDNLSRSFSARFADPSIVSRNLR
        +S  ++I LG+   S  EQ+  +        W++L  K+K    +  S+ V    +Y P  Y LNFDQG G     EP+NLSRSFS RFADP+ +     
Subjt:  NSRSQSIRLGQSCVSSNEQESKR------VGWQILWQKIKKEKKKIFSSSVKFRSSYNPNAYELNFDQGIGC---SEPDNLSRSFSARFADPSIVSRNLR

Query:  LL
        LL
Subjt:  LL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAAATGGCGCAATTCTCGTAGCCAAAGCATCAGGTTGGGTCAGAGCTGTGTTTCTTCAAACGAACAGGAAAGCAAACGAGTCGGATGGCAGATTTTGTGGCA
AAAAATCAAGAAGGAGAAGAAGAAAATCTTCAGTTCTTCTGTTAAATTTCGTTCTTCTTATAATCCAAATGCTTATGAGTTGAATTTCGATCAAGGAATTGGATGCTCTG
AGCCTGATAATCTCTCCAGATCCTTCTCTGCTCGTTTTGCTGATCCATCAATCGTCTCCAGGAACTTGAGATTGTTGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAAATGGCGCAATTCTCGTAGCCAAAGCATCAGGTTGGGTCAGAGCTGTGTTTCTTCAAACGAACAGGAAAGCAAACGAGTCGGATGGCAGATTTTGTGGCA
AAAAATCAAGAAGGAGAAGAAGAAAATCTTCAGTTCTTCTGTTAAATTTCGTTCTTCTTATAATCCAAATGCTTATGAGTTGAATTTCGATCAAGGAATTGGATGCTCTG
AGCCTGATAATCTCTCCAGATCCTTCTCTGCTCGTTTTGCTGATCCATCAATCGTCTCCAGGAACTTGAGATTGTTGGATTGA
Protein sequenceShow/hide protein sequence
MGIKWRNSRSQSIRLGQSCVSSNEQESKRVGWQILWQKIKKEKKKIFSSSVKFRSSYNPNAYELNFDQGIGCSEPDNLSRSFSARFADPSIVSRNLRLLD