; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037384 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037384
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpre-rRNA-processing protein TSR2 homolog
Genome locationchr2:5740403..5745309
RNA-Seq ExpressionLag0037384
SyntenyLag0037384
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR019398 - Pre-rRNA-processing protein TSR2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608259.1 Pre-rRNA-processing protein TSR2-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-8669.03Show/hide
Query:  SESQSQLSLDRPSPSISFTVLSCFKGFTFGGGEMDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFV
        SES      DRPSPSISFT ++  +GFT  GGEMDGGGNRLLPA AFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIF WFTQNK    
Subjt:  SESQSQLSLDRPSPSISFTVLSCFKGFTFGGGEMDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFV

Query:  LFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPR-VAHSHVSQVASDEEE
                                E LYIDDLEMILDE MLSLNTQVDDGSIEEVAEK+I M++ECVDGNFSSIE+LRQ+PLPR  AHSHVSQ  SD+EE
Subjt:  LFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPR-VAHSHVSQVASDEEE

Query:  EEDGGGGDGDVGNGRDAMSNDMLVDVI-----QQPRPVNQP-NPQATAEAEDGWVQVTSRR-SRGTRN
        EE+    D D GNG D M NDM+VD I     QQPR VNQP  P+A++ AEDGWVQVTSRR SRGTRN
Subjt:  EEDGGGGDGDVGNGRDAMSNDMLVDVI-----QQPRPVNQP-NPQATAEAEDGWVQVTSRR-SRGTRN

XP_022936382.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita moschata]2.3e-7872.81Show/hide
Query:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE
        M+GG NRLLPAGA PLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDI  WFTQNK                            E LYIDDLE
Subjt:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE

Query:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEED-GGGGDGDVGNGRDAMSNDMLVDVIQQPRPV
        MILDEA+LSLNTQVDDGSIEEVAE++I+M++EC+DGNFSSIEKLRQ+PLPRVA SHVSQV SD++EEED   GGD  VGNGR     DM+VD I QP PV
Subjt:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEED-GGGGDGDVGNGRDAMSNDMLVDVIQQPRPV

Query:  NQPNPQATAEAEDGWVQVTSRRSRGTRN
        NQP P+ATAEAEDGWVQVTSRRSRGTRN
Subjt:  NQPNPQATAEAEDGWVQVTSRRSRGTRN

XP_022975934.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita maxima]6.0e-7972.25Show/hide
Query:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE
        M+GG NRLLPA A P FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDI  WFTQNK                            E LYIDDLE
Subjt:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE

Query:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVN
        MILDEA+LSLNTQVDDGSIEEVAE++I+M++EC+DGNFSSIEKLRQ+PLP+VA SHVSQV SD+EEE++  GGD DVGNGR     DM+VD I QPRPVN
Subjt:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVN

Query:  QPNPQATAEAEDGWVQVTSRRSRGTRN
        QP P+ATAEAEDGWVQVTSRRSRGTRN
Subjt:  QPNPQATAEAEDGWVQVTSRRSRGTRN

XP_022982103.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita maxima]7.8e-7972.84Show/hide
Query:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE
        M+GGGNRLLPA AFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIF WFTQNK                            E LYIDDLE
Subjt:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE

Query:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASD--EEEEEDGGGGDGDVGNGRDAMSNDMLVDVI-QQPR
        MILDE MLSLNTQVDDGSIEEVAEK+I M++ECVDGNFSSI +LRQ+PLPR AHSHVSQ  SD  EEEEED    DGDVGNG D M NDM+VD I QQPR
Subjt:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASD--EEEEEDGGGGDGDVGNGRDAMSNDMLVDVI-QQPR

Query:  PVN-QPNPQATAEAEDGWVQVTSRR-SRGTRN
         VN QP P+A+A AEDGWVQVTSRR SRGTRN
Subjt:  PVN-QPNPQATAEAEDGWVQVTSRR-SRGTRN

XP_023524387.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita pepo subsp. pepo]3.9e-7871.55Show/hide
Query:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE
        M+GGGNRLLPA AFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIF WFTQNK                            E LYIDDLE
Subjt:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE

Query:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVI----QQP
        MILDE MLSLNTQVDDGSIEEVAEK+I M++ECVDGNFSSIE+LRQ+PL R AHSHVSQ  SD+EEEED    D D GNG D M NDM+VD I    QQP
Subjt:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVI----QQP

Query:  RPVNQPNPQATAEAEDGWVQVTSRR-SRGTRN
        R VNQP P+A+A AEDGWVQVTSRR SRGTRN
Subjt:  RPVNQPNPQATAEAEDGWVQVTSRR-SRGTRN

TrEMBL top hitse value%identityAlignment
A0A5D3E598 Pre-rRNA-processing protein TSR26.9e-7366.96Show/hide
Query:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE
        M+GGGNRLLPA AFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIF WF QNK                            EQLYIDDLE
Subjt:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE

Query:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQ--QPRP
         ILDEAMLSLNTQVDDGSIEEVAE++I M++ECVD NFSSIE+LRQ+P P+VAH+HV+Q ASD+++++D            D   NDM+VD +Q  Q RP
Subjt:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQ--QPRP

Query:  VN-QPNPQATAEAEDGWVQVTSRRSRGTRN
        VN Q NP+ATAEAEDGWVQVTSRR+RGTRN
Subjt:  VN-QPNPQATAEAEDGWVQVTSRRSRGTRN

A0A6J1F8A7 pre-rRNA-processing protein TSR2 homolog1.1e-7872.81Show/hide
Query:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE
        M+GG NRLLPAGA PLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDI  WFTQNK                            E LYIDDLE
Subjt:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE

Query:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEED-GGGGDGDVGNGRDAMSNDMLVDVIQQPRPV
        MILDEA+LSLNTQVDDGSIEEVAE++I+M++EC+DGNFSSIEKLRQ+PLPRVA SHVSQV SD++EEED   GGD  VGNGR     DM+VD I QP PV
Subjt:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEED-GGGGDGDVGNGRDAMSNDMLVDVIQQPRPV

Query:  NQPNPQATAEAEDGWVQVTSRRSRGTRN
        NQP P+ATAEAEDGWVQVTSRRSRGTRN
Subjt:  NQPNPQATAEAEDGWVQVTSRRSRGTRN

A0A6J1FPH6 pre-rRNA-processing protein TSR2 homolog3.5e-7771.55Show/hide
Query:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE
        MDG GNRLLPA AFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIF WFTQNK                            E LYIDDLE
Subjt:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE

Query:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVI---QQPR
        MILDE MLSLNTQVDDGSIEEVAEK+I M++ECVDGNFSSIE+LRQ+PLPR AHSHVSQ  SD+EEEE+    D D GNG D M NDM+VD I   QQPR
Subjt:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVI---QQPR

Query:  PVNQP-NPQATAEAEDGWVQVTSRR-SRGTRN
         VNQP  P+A+A AEDGWVQVTSRR SRGTRN
Subjt:  PVNQP-NPQATAEAEDGWVQVTSRR-SRGTRN

A0A6J1IM14 pre-rRNA-processing protein TSR2 homolog2.9e-7972.25Show/hide
Query:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE
        M+GG NRLLPA A P FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDI  WFTQNK                            E LYIDDLE
Subjt:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE

Query:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVN
        MILDEA+LSLNTQVDDGSIEEVAE++I+M++EC+DGNFSSIEKLRQ+PLP+VA SHVSQV SD+EEE++  GGD DVGNGR     DM+VD I QPRPVN
Subjt:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVN

Query:  QPNPQATAEAEDGWVQVTSRRSRGTRN
        QP P+ATAEAEDGWVQVTSRRSRGTRN
Subjt:  QPNPQATAEAEDGWVQVTSRRSRGTRN

A0A6J1J400 pre-rRNA-processing protein TSR2 homolog3.8e-7972.84Show/hide
Query:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE
        M+GGGNRLLPA AFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIF WFTQNK                            E LYIDDLE
Subjt:  MDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLE

Query:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASD--EEEEEDGGGGDGDVGNGRDAMSNDMLVDVI-QQPR
        MILDE MLSLNTQVDDGSIEEVAEK+I M++ECVDGNFSSI +LRQ+PLPR AHSHVSQ  SD  EEEEED    DGDVGNG D M NDM+VD I QQPR
Subjt:  MILDEAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASD--EEEEEDGGGGDGDVGNGRDAMSNDMLVDVI-QQPR

Query:  PVN-QPNPQATAEAEDGWVQVTSRR-SRGTRN
         VN QP P+A+A AEDGWVQVTSRR SRGTRN
Subjt:  PVN-QPNPQATAEAEDGWVQVTSRR-SRGTRN

SwissProt top hitse value%identityAlignment
Q06672 Pre-rRNA-processing protein TSR22.0e-0526.56Show/hide
Query:  FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLSLNTQVDD
        F+ G+ +V+ +W AL +AVEN WGG DS  K +        W T      V+ L  N       ++V+ + +     LY      ++DE      T V+D
Subjt:  FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLSLNTQVDD

Query:  GSIEEVAEKMIIMYDECVDGNFSSIEKL--------RQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVI-QQPRPV
         S   +A ++I +Y++C + N++ +EKL        R     RV H        D+E++ED    D +     D   ++++ D++  +P P+
Subjt:  GSIEEVAEKMIIMYDECVDGNFSSIEKL--------RQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVI-QQPRPV

Q3KRG3 Pre-rRNA-processing protein TSR2 homolog2.4e-0623.11Show/hide
Query:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLS-LNTQV
        +F E +  VL  W  LQ+AV+N +GG  S++K E +   +  +FT N                               L  D++E  + E M +  +T V
Subjt:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLS-LNTQV

Query:  DDGSIEEVAEKMIIMYDECVDGNFSSIE----KLRQTPLPR-VAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVNQPNPQATAE
        DDGS+ +VA+++  M+ +C  G  + +     KL Q       A +  +Q   D++++++    D + G+   ++S+  + D+  +             E
Subjt:  DDGSIEEVAEKMIIMYDECVDGNFSSIE----KLRQTPLPR-VAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVNQPNPQATAE

Query:  AEDGWVQVTSRR
         +DGW  V  ++
Subjt:  AEDGWVQVTSRR

Q3T090 Pre-rRNA-processing protein TSR2 homolog2.4e-0625.79Show/hide
Query:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLS-LNTQV
        LF   +   L  W ALQ+AVEN +GG  S+ K E L   +  +F +N                               L +D++E  L E M++  +T V
Subjt:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLS-LNTQV

Query:  DDGSIEEVAEKMIIMYDECVDGNFSSIE-----------KLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVNQPN
        +DGS+ +V++++  M+     G+ ++++           K+R T LP    +     A+  EE E     DG   +G           V  QP P + P+
Subjt:  DDGSIEEVAEKMIIMYDECVDGNFSSIE-----------KLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVNQPN

Query:  PQATAE---AEDGWVQVTSRR
         Q   E    EDGW  V  ++
Subjt:  PQATAE---AEDGWVQVTSRR

Q8C8T8 Pre-rRNA-processing protein TSR2 homolog3.5e-0524.89Show/hide
Query:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLS-LNTQV
        LF   +   L  W ALQ+AVEN +GG  S+ K E L   +  +F  N                               L ++++E  L E M +  +T V
Subjt:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLS-LNTQV

Query:  DDGSIEEVAEKMIIMYDECVDGNFSSIE-----------KLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVNQPN
        +DGS+ +V++++  M+     G+ ++++           K+  TPL     + V++   D  EE        +V    D  + D   +V  QP+P + P+
Subjt:  DDGSIEEVAEKMIIMYDECVDGNFSSIE-----------KLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVNQPN

Query:  PQATAE---AEDGWVQVTSRR
         Q   E    EDGW  V  ++
Subjt:  PQATAE---AEDGWVQVTSRR

Q969E8 Pre-rRNA-processing protein TSR2 homolog5.9e-0524.3Show/hide
Query:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLS-LNTQV
        LF+ G+   L  W ALQ+AVEN +GG  S+ K + L   +  +F +N                               L +D++E  L E + +  +T V
Subjt:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEAMLS-LNTQV

Query:  DDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDG----DVGNGRDAMSNDMLVDVIQQPRPVNQPNPQATAE-
        +DGS+ +V++++  M+     G+ +++ ++      R      + + +  E +ED    D     +V    D  + D    V  QP P + P+ Q   E 
Subjt:  DDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDG----DVGNGRDAMSNDMLVDVIQQPRPVNQPNPQATAE-

Query:  --AEDGWVQVTSRR
           EDGW  V  ++
Subjt:  --AEDGWVQVTSRR

Arabidopsis top hitse value%identityAlignment
AT3G22510.1 Pre-rRNA-processing protein TSR2, conserved region2.1e-1335.25Show/hide
Query:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEA-MLSLNTQV
        + Q  IG +LSRW  LQ+AV+N+WGG DS +K + L  ++F                              LIS S  + ++++E +L E+ +LS NT++
Subjt:  LFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDEA-MLSLNTQV

Query:  DDGSIEEVAEKMIIMYDECVDG
        +DGSIEEVAE+++I+++E + G
Subjt:  DDGSIEEVAEKMIIMYDECVDG

AT5G27990.1 Pre-rRNA-processing protein TSR2, conserved region2.6e-2433.33Show/hide
Query:  NRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDE
        N  L   A  + +EGIGL+L RW+A++ AVEN WGGRDS+ K     + +F +F Q+K                                I+ L  +LD+
Subjt:  NRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILDE

Query:  AMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVI---QQPRPVNQP
         +  LNT  +DGS++EVA  ++ +Y++C +GN+  +E+LR T     A   V +V++ ++EE D    D D     D  + DM+VD     Q+  PV++P
Subjt:  AMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVI---QQPRPVNQP

Query:  NPQATAEAEDGWVQVTSRRSRGTRN
               A+DGW  V+SR+++G RN
Subjt:  NPQATAEAEDGWVQVTSRRSRGTRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCAAATCTGGAAAACCCACGACAGGAACTCAGATCTAAAACATTTTCCTTTCTTTTTTTAAATACGAGGTTCGTCAGGAGAAGGGGAGAGCAGAGGAAAAGGGA
AGGAGAAGAAGAGACGACGGTTCCGGCGGTTCTAGCGACAGCCAACTCCGGCGTGCGACGACTCCGACTCCAGCGACGACAGGTGATGGCCCGACGGGCTCGTCAATCTG
CTGCAATTATCTTCTCGGTTCTGAAGCCCTCAGAATCGCAATCGCAGCTCTCTCTCGATCGTCCCTCACCATCAATTTCGTTCACTGTTCTCAGTTGCTTCAAGGGTTTT
ACGTTCGGAGGCGGAGAGATGGACGGTGGCGGAAACCGCCTTCTCCCGGCAGGTGCTTTTCCATTGTTCCAGGAAGGTATCGGGTTGGTTTTATCTCGTTGGTCAGCCCT
GCAGTTGGCGGTGGAAAATGAGTGGGGTGGTCGTGACTCTCGTCGTAAAGTTGAACTATTATGCTCCGACATTTTCGCATGGTTTACTCAGAACAAAGGTAACTTTGTTC
TGTTTCTCTTGGATAATTTGTGCTTGTGCATTGTTCCTCAGCAAGTCCTCTGTAGTTTGATCAGTTTCTCAGAGCAACTATATATTGATGATTTAGAAATGATTCTTGAT
GAAGCTATGCTTTCGTTGAATACTCAGGTTGATGATGGTAGCATTGAGGAGGTAGCTGAAAAAATGATTATCATGTATGACGAATGTGTGGATGGTAACTTTAGTTCTAT
CGAAAAGTTAAGGCAAACCCCTCTTCCACGAGTTGCTCATTCTCATGTTAGTCAGGTTGCGAGTGACGAAGAAGAAGAAGAAGATGGTGGTGGTGGTGATGGTGATGTTG
GAAATGGAAGAGATGCCATGAGCAATGACATGTTGGTGGATGTCATACAACAACCCAGGCCTGTGAATCAGCCCAATCCACAGGCTACAGCTGAAGCTGAAGATGGATGG
GTTCAAGTCACATCAAGAAGAAGTAGGGGTACAAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCAAATCTGGAAAACCCACGACAGGAACTCAGATCTAAAACATTTTCCTTTCTTTTTTTAAATACGAGGTTCGTCAGGAGAAGGGGAGAGCAGAGGAAAAGGGA
AGGAGAAGAAGAGACGACGGTTCCGGCGGTTCTAGCGACAGCCAACTCCGGCGTGCGACGACTCCGACTCCAGCGACGACAGGTGATGGCCCGACGGGCTCGTCAATCTG
CTGCAATTATCTTCTCGGTTCTGAAGCCCTCAGAATCGCAATCGCAGCTCTCTCTCGATCGTCCCTCACCATCAATTTCGTTCACTGTTCTCAGTTGCTTCAAGGGTTTT
ACGTTCGGAGGCGGAGAGATGGACGGTGGCGGAAACCGCCTTCTCCCGGCAGGTGCTTTTCCATTGTTCCAGGAAGGTATCGGGTTGGTTTTATCTCGTTGGTCAGCCCT
GCAGTTGGCGGTGGAAAATGAGTGGGGTGGTCGTGACTCTCGTCGTAAAGTTGAACTATTATGCTCCGACATTTTCGCATGGTTTACTCAGAACAAAGGTAACTTTGTTC
TGTTTCTCTTGGATAATTTGTGCTTGTGCATTGTTCCTCAGCAAGTCCTCTGTAGTTTGATCAGTTTCTCAGAGCAACTATATATTGATGATTTAGAAATGATTCTTGAT
GAAGCTATGCTTTCGTTGAATACTCAGGTTGATGATGGTAGCATTGAGGAGGTAGCTGAAAAAATGATTATCATGTATGACGAATGTGTGGATGGTAACTTTAGTTCTAT
CGAAAAGTTAAGGCAAACCCCTCTTCCACGAGTTGCTCATTCTCATGTTAGTCAGGTTGCGAGTGACGAAGAAGAAGAAGAAGATGGTGGTGGTGGTGATGGTGATGTTG
GAAATGGAAGAGATGCCATGAGCAATGACATGTTGGTGGATGTCATACAACAACCCAGGCCTGTGAATCAGCCCAATCCACAGGCTACAGCTGAAGCTGAAGATGGATGG
GTTCAAGTCACATCAAGAAGAAGTAGGGGTACAAGAAATTAG
Protein sequenceShow/hide protein sequence
MNSNLENPRQELRSKTFSFLFLNTRFVRRRGEQRKREGEEETTVPAVLATANSGVRRLRLQRRQVMARRARQSAAIIFSVLKPSESQSQLSLDRPSPSISFTVLSCFKGF
TFGGGEMDGGGNRLLPAGAFPLFQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCSDIFAWFTQNKGNFVLFLLDNLCLCIVPQQVLCSLISFSEQLYIDDLEMILD
EAMLSLNTQVDDGSIEEVAEKMIIMYDECVDGNFSSIEKLRQTPLPRVAHSHVSQVASDEEEEEDGGGGDGDVGNGRDAMSNDMLVDVIQQPRPVNQPNPQATAEAEDGW
VQVTSRRSRGTRN