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Lag0037393 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037393
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionClassical arabinogalactan protein
Genome locationchr2:5836635..5837072
RNA-Seq ExpressionLag0037393
SyntenyLag0037393
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015885267.2 classical arabinogalactan protein 5 [Ziziphus jujuba]2.0e-1254.25Show/hide
Query:  MASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKSPPASS-------PKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPS
        MA SAFV F +FALVAGS L QAP AAP +SPTKSPPASS       P   P PTV+ P +S P+    PS  A SPS   SPPA +P  SPPAPP    
Subjt:  MASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKSPPASS-------PKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPS

Query:  TSPASTPVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL
        TS  S+ VP  SI+  P Q  SP S PGNGAA+NR+A +GS+ A V ++++LL
Subjt:  TSPASTPVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL

XP_018833931.2 classical arabinogalactan protein 10-like [Juglans regia]5.2e-1651.7Show/hide
Query:  MASSAFVF-FVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPAST
        MA S FV+  +LFALVAGS   QAPG AP  SPTKSPPASSPK+APPPT  + P  TPS  ++P  +AP+P++  +PP  AP++SPPAPPT+P+++P   
Subjt:  MASSAFVF-FVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPAST

Query:  PVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL
        P    SI+ PP+ + SP  +PGNGAA+N ++V+GS+ + ++++ LL+
Subjt:  PVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL

XP_022937303.1 lysine-rich arabinogalactan protein 19-like [Cucurbita moschata]4.1e-4587.5Show/hide
Query:  ASSAFVFFVLFALVAGSLGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPASTPVP
        +SSAFVF VL AL+AGSLGQAPGAAPASSPTKSPP SSPKSAP PTVATPPAS+PSS LAPSGAAPSPSTGTSPPA +PATSPPAPPTAPS SPA TPVP
Subjt:  ASSAFVFFVLFALVAGSLGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPASTPVP

Query:  ATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL
          SI+TPPA APSPASTPGNG AVNRIAVSGSII AVISSALLL
Subjt:  ATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL

XP_030528693.1 classical arabinogalactan protein 10 [Rhodamnia argentea]1.8e-1352.9Show/hide
Query:  MASSAFVFFVLFALVAGS-LGQAPGA----APASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGT-SPPAFAPATSPPAPPTAPSTS
        MASS+F + +LFAL+A S LGQAPG+    +PA+SPTKSPPA+SP +  P  VATPPA TPS    P  +AP P+  T +PP+ APA+SP + P AP   
Subjt:  MASSAFVFFVLFALVAGS-LGQAPGA----APASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGT-SPPAFAPATSPPAPPTAPSTS

Query:  PASTP--VPATSIATPP-AQAPSPAST-PGNGAAVNRIAVSGSIIAAVISSALLL
        PASTP   P+ ++  PP A APSP  T PG+  A+NR+A++GS+ AAV++ ALL+
Subjt:  PASTP--VPATSIATPP-AQAPSPAST-PGNGAAVNRIAVSGSIIAAVISSALLL

XP_040997605.1 classical arabinogalactan protein 10-like [Juglans microcarpa x Juglans regia]2.3e-1651.02Show/hide
Query:  MASSAFVF-FVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPAST
        MA S FV+  +LFALVAGS   QAPG AP  SPTKSPPASSPK+APPP   + P  +P+  ++P  +AP+P++  +PP  AP++SPPAPPT   ++P S 
Subjt:  MASSAFVF-FVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPAST

Query:  PVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL
        P   TSI++PP+ + SPA +PGNGAA+N ++V+GS+ + ++++ LL+
Subjt:  PVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL

TrEMBL top hitse value%identityAlignment
A0A200PN20 Uncharacterized protein1.7e-0951.66Show/hide
Query:  MASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPS-TGTSPPAFAPA----TSPPAPPTAPSTS
        MASS FV  ++ ALV GS + QAP  AP ++PTKSP AS      PPTV  P          PS AAPSP+ T T PPA AP+     SPPAPPT+ S S
Subjt:  MASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPS-TGTSPPAFAPA----TSPPAPPTAPSTS

Query:  PASTPVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL
        P+S P P +S    PA  PS  STPGNG A+NR+ +SGS   A+ S+ALLL
Subjt:  PASTPVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL

A0A218X9B5 classical arabinogalactan protein 91.9e-1150.34Show/hide
Query:  MASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPS---SPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPA
        MA S F+F VLFAL AGS L QAPGAAP+  P+ +PP S P S  P  VATPPA+TPS   +P  P  ++P+PS+ T P     +TSPPAPP +P+ +P 
Subjt:  MASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPS---SPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPA

Query:  STPVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL
         TP   +S ATPPA       +PG+GA  NR AV+G++ AA +++AL+L
Subjt:  STPVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL

A0A2I4FQK5 classical arabinogalactan protein 10-like2.5e-1651.7Show/hide
Query:  MASSAFVF-FVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPAST
        MA S FV+  +LFALVAGS   QAPG AP  SPTKSPPASSPK+APPPT  + P  TPS  ++P  +AP+P++  +PP  AP++SPPAPPT+P+++P   
Subjt:  MASSAFVF-FVLFALVAGS-LGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPAST

Query:  PVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL
        P    SI+ PP+ + SP  +PGNGAA+N ++V+GS+ + ++++ LL+
Subjt:  PVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL

A0A6J1FFR5 lysine-rich arabinogalactan protein 19-like2.0e-4587.5Show/hide
Query:  ASSAFVFFVLFALVAGSLGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPASTPVP
        +SSAFVF VL AL+AGSLGQAPGAAPASSPTKSPP SSPKSAP PTVATPPAS+PSS LAPSGAAPSPSTGTSPPA +PATSPPAPPTAPS SPA TPVP
Subjt:  ASSAFVFFVLFALVAGSLGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPASTPVP

Query:  ATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL
          SI+TPPA APSPASTPGNG AVNRIAVSGSII AVISSALLL
Subjt:  ATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL

A0A6P4AHL3 classical arabinogalactan protein 59.9e-1354.25Show/hide
Query:  MASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKSPPASS-------PKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPS
        MA SAFV F +FALVAGS L QAP AAP +SPTKSPPASS       P   P PTV+ P +S P+    PS  A SPS   SPPA +P  SPPAPP    
Subjt:  MASSAFVFFVLFALVAGS-LGQAPGAAPASSPTKSPPASS-------PKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPS

Query:  TSPASTPVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL
        TS  S+ VP  SI+  P Q  SP S PGNGAA+NR+A +GS+ A V ++++LL
Subjt:  TSPASTPVPATSIATPPAQAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCGCCTTCGTCTTCTTCGTCCTCTTCGCTTTGGTTGCCGGCTCTTTGGGCCAGGCTCCGGGCGCCGCACCGGCTTCTTCTCCAACCAAGTCGCCGCCGGC
CTCCTCGCCGAAATCCGCTCCTCCGCCTACTGTGGCCACTCCTCCTGCTTCGACGCCGTCTTCACCCCTTGCTCCGTCGGGCGCGGCTCCCTCTCCTTCCACTGGAACTT
CACCACCAGCTTTTGCGCCGGCTACTTCTCCACCGGCTCCGCCTACTGCTCCTTCGACGTCACCAGCGTCCACTCCGGTTCCAGCAACTTCGATCGCGACTCCTCCGGCT
CAGGCTCCGTCGCCGGCCTCAACCCCTGGCAATGGCGCTGCCGTGAACAGAATCGCCGTCTCTGGATCTATCATCGCGGCTGTAATTTCCTCCGCTCTACTGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCGCCTTCGTCTTCTTCGTCCTCTTCGCTTTGGTTGCCGGCTCTTTGGGCCAGGCTCCGGGCGCCGCACCGGCTTCTTCTCCAACCAAGTCGCCGCCGGC
CTCCTCGCCGAAATCCGCTCCTCCGCCTACTGTGGCCACTCCTCCTGCTTCGACGCCGTCTTCACCCCTTGCTCCGTCGGGCGCGGCTCCCTCTCCTTCCACTGGAACTT
CACCACCAGCTTTTGCGCCGGCTACTTCTCCACCGGCTCCGCCTACTGCTCCTTCGACGTCACCAGCGTCCACTCCGGTTCCAGCAACTTCGATCGCGACTCCTCCGGCT
CAGGCTCCGTCGCCGGCCTCAACCCCTGGCAATGGCGCTGCCGTGAACAGAATCGCCGTCTCTGGATCTATCATCGCGGCTGTAATTTCCTCCGCTCTACTGCTTTAA
Protein sequenceShow/hide protein sequence
MASSAFVFFVLFALVAGSLGQAPGAAPASSPTKSPPASSPKSAPPPTVATPPASTPSSPLAPSGAAPSPSTGTSPPAFAPATSPPAPPTAPSTSPASTPVPATSIATPPA
QAPSPASTPGNGAAVNRIAVSGSIIAAVISSALLL