| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6608265.1 RNA-binding protein CP33, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 2.2e-138 | 88.7 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MALVRLPCSSSSTFLRSKQQHPIFLA LSC QNPS SINGDINL L RSS SLLSTS HNP I + ++ +L+F FASTSQD+AVASSPSDTEEFSRT
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWNSTPEDIRSLFEK+GTV+DVELSMYNKIRNRGLAFVTM SPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSP VKP PVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLPEEKSPSEVTSTDGVE
FEARAKDLREFFDSGSGN+VSAQIIFHENPRRSSGYGFVAFKTK+DAEAA+SEFQGKIFMGRALRVARSKQFVKLPEEKS SEVTSTDG++
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLPEEKSPSEVTSTDGVE
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| XP_004136268.1 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] | 4.5e-139 | 88.7 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MA VRLPCSSSS+ LRSK H IFLA LSC QNPS+ INGD NL +SRSSPSLLSTS+SH+P ISIRAKRT+ VFQFASTSQDEAV SSPSDTEEFS+T
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPW+STPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTL+LNYAKLKKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
PF+ARAKDL+EFFDSGSGNVVSAQIIF+ENPRRSSGYGFVAFKTKKDAEAAISEFQGK FMGR+LRVARSKQFVKLP EEK SE STDGVELANAAAE
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
Query: V
V
Subjt: V
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| XP_008466190.1 PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Cucumis melo] | 3.3e-142 | 90.03 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MA VRLPCSSSS+ LRSKQ H IFLA LSC QNPS+ INGD NL +SRSSPSLLSTS+ HNP ISI AKRT+K VFQFASTSQDEAV+SSPSD EEFSRT
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPW+STPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTL+LNYAKLKKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGR+LRVARSKQFVKLP EEKS SE STDGVELANAAAE
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
Query: V
V
Subjt: V
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| XP_022940500.1 RNA-binding protein CP33, chloroplastic-like isoform X2 [Cucurbita moschata] | 2.2e-141 | 89 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MALVRLPCSSSSTFLRSKQQHPIFLA LSC QNPS SINGDINL L RSS SLLSTS HNP I ++ +L+F FASTSQD+AVASSPSDTEEFSRT
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWNSTPEDIRSLFEK+GTVLDVELSMYNKIRNRGLAFVTM SPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSP VKP PVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLPEEKSPSEVTSTDGVELANAAAEV
FEARAKDLREFFDSGSGN+VSAQIIFHENPRRSSGYGFVAFKTK+DAEAA+SEFQGKIFMGRALRVARSKQFVKLPEEKS SEVTSTDG+ L+NAAAEV
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLPEEKSPSEVTSTDGVELANAAAEV
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| XP_038897887.1 31 kDa ribonucleoprotein, chloroplastic [Benincasa hispida] | 6.5e-146 | 91.69 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MALVRLPCSSSS+FLRSKQQH IFLA LSCPQNPS+ INGD NL +SRSSPSLLSTS+ HNP ISIR KRT+K VFQFASTSQDEAVASSPSD+EEFS+T
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPW+STPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTL+LNYAKLKKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGR+LRVARSKQFVKLP EEKS SE STD VELANAAAE
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
Query: V
V
Subjt: V
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LEN0 Uncharacterized protein | 2.2e-139 | 88.7 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MA VRLPCSSSS+ LRSK H IFLA LSC QNPS+ INGD NL +SRSSPSLLSTS+SH+P ISIRAKRT+ VFQFASTSQDEAV SSPSDTEEFS+T
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPW+STPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTL+LNYAKLKKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
PF+ARAKDL+EFFDSGSGNVVSAQIIF+ENPRRSSGYGFVAFKTKKDAEAAISEFQGK FMGR+LRVARSKQFVKLP EEK SE STDGVELANAAAE
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
Query: V
V
Subjt: V
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| A0A1S3CS17 31 kDa ribonucleoprotein, chloroplastic | 1.6e-142 | 90.03 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MA VRLPCSSSS+ LRSKQ H IFLA LSC QNPS+ INGD NL +SRSSPSLLSTS+ HNP ISI AKRT+K VFQFASTSQDEAV+SSPSD EEFSRT
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPW+STPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTL+LNYAKLKKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGR+LRVARSKQFVKLP EEKS SE STDGVELANAAAE
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
Query: V
V
Subjt: V
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| A0A5A7TBD1 31 kDa ribonucleoprotein | 1.6e-142 | 90.03 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MA VRLPCSSSS+ LRSKQ H IFLA LSC QNPS+ INGD NL +SRSSPSLLSTS+ HNP ISI AKRT+K VFQFASTSQDEAV+SSPSD EEFSRT
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPW+STPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTL+LNYAKLKKEKPSPPVKP PVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFK KKDAEAAISEFQGK FMGR+LRVARSKQFVKLP EEKS SE STDGVELANAAAE
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
Query: V
V
Subjt: V
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| A0A6J1FF97 28 kDa ribonucleoprotein, chloroplastic-like | 3.2e-138 | 87.71 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MALVRLPCSSSS FLRS QQ+ +F++ LSCPQNPS+S NGDI L LSRSS SL ST L HNP SIRAKRT K VFQ ASTSQD+AVASS SD EEFSR
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPW+STPEDIRSLFEKYGTV+DVELSMYNKIRNRGLAFVTMGSPEEALAA+NNLESYEF GRTLKLNYAK+KKEKPSPPVKPNPVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
PF+ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGK FMGR+LRVARSKQFVKLP EEKS SE TSTDGVELA+AAAE
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLP-EEKSPSEVTSTDGVELANAAAE
Query: V
V
Subjt: V
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| A0A6J1FQT2 RNA-binding protein CP33, chloroplastic-like isoform X2 | 1.0e-141 | 89 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
MALVRLPCSSSSTFLRSKQQHPIFLA LSC QNPS SINGDINL L RSS SLLSTS HNP I ++ +L+F FASTSQD+AVASSPSDTEEFSRT
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRT
Query: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
RLLAQNVPWNSTPEDIRSLFEK+GTVLDVELSMYNKIRNRGLAFVTM SPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSP VKP PVTFNLFVANL
Subjt: RLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANL
Query: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLPEEKSPSEVTSTDGVELANAAAEV
FEARAKDLREFFDSGSGN+VSAQIIFHENPRRSSGYGFVAFKTK+DAEAA+SEFQGKIFMGRALRVARSKQFVKLPEEKS SEVTSTDG+ L+NAAAEV
Subjt: PFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLPEEKSPSEVTSTDGVELANAAAEV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P19682 28 kDa ribonucleoprotein, chloroplastic | 5.4e-18 | 29.11 | Show/hide |
Query: LSRSSPSLLSTS--LSHNPS-ISIRAKRTAKLVFQFASTSQD-EAVASSPSDTEEFSR----TRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNK-
LS S P+LLS + + P+ +S+ ++ LV D + +TEE+ +L N+P++ E + LF++ G V+++ +YN+
Subjt: LSRSSPSLLSTS--LSHNPS-ISIRAKRTAKLVFQFASTSQD-EAVASSPSDTEEFSR----TRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNK-
Query: -IRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSS
R+RG FVTM + EEA A+ Y+ GR L +N A + +P + T+ ++V N+P++ L + F S G VVSA+++F RS
Subjt: -IRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKPNPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSS
Query: GYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQ
G+GFV ++ + AI+ G+ GR +RV +++
Subjt: GYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQ
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| P19684 33 kDa ribonucleoprotein, chloroplastic | 7.7e-17 | 27.97 | Show/hide |
Query: SSSSTFLRSKQQHPIF-LAHLSCPQNPSHSINGDINLFLSRS---------SPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFS
+SS++ L Q P F + HLS +H N IN ++ S LST S + + + + + V A ++ ++E
Subjt: SSSSTFLRSKQQHPIF-LAHLSCPQNPSHSINGDINLFLSRS---------SPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFS
Query: RTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKL----KKEKPSPPVKPNPVT
RL N+P++ T + +F + GTV +VE+ +Y+++ R+RG AFVTMGS EEA A+ + + GRT+K+N+ ++ ++E S ++
Subjt: RTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKL----KKEKPSPPVKPNPVT
Query: F-----NLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALR--VARSKQFVKLPEEKSPSEV
F L+VANL + ++ LR+ F G +SA++I+ + RS G+GF+ F + + +A+ GR LR VA K V P S
Subjt: F-----NLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALR--VARSKQFVKLPEEKSPSEV
Query: TSTDGVELANA
+D EL ++
Subjt: TSTDGVELANA
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| P28644 28 kDa ribonucleoprotein, chloroplastic | 7.7e-17 | 30.32 | Show/hide |
Query: SQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNK--IRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKK
S + V +E +L N+P++ E + +F+ G V+++ +YN+ R+RG FVTM + EEA A+ L Y+ +GR L +N A +
Subjt: SQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNK--IRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKK
Query: EKPSPPVKPNPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRV
P + ++V NLP++ L + F S G VVSA+++ RS G+GFV ++ + AI+ G+ GRA+RV
Subjt: EKPSPPVKPNPVTFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRV
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| Q08937 29 kDa ribonucleoprotein B, chloroplastic | 1.9e-15 | 28.73 | Show/hide |
Query: PQNPSH-SINGDINLFLSRSSPSLLSTSLSHNPSISIR----AKRTAKLVFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGT
PQ PS N ++ F SS LS S S SI+ + T + F D VA P +E+ +L N+P++ + LFE+ G
Subjt: PQNPSH-SINGDINLFLSRSSPSLLSTSLSHNPSISIR----AKRTAKLVFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGT
Query: VLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNY--AKLKKEKPS------------------------PPVKPNPVTFNLFV
V VE+ +Y+K+ R+RG FVTM + EE AA YE +GR +++N A K+E S + + ++V
Subjt: VLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNY--AKLKKEKPS------------------------PPVKPNPVTFNLFV
Query: ANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQ
NL + L+E F S GNVV A++++ + RS G+GFV + + K+ AI G GR++RV+ +++
Subjt: ANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQ
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| Q39061 RNA-binding protein CP33, chloroplastic | 2.4e-18 | 28.34 | Show/hide |
Query: NPSHSINGDINLFLSRSSPSLLSTSLSHNPSI---SIRAKRTAKLVFQFASTSQDEAVAS-------------SPSDTEEFSRT--------RLLAQNVP
NP S + + LF + S + NP I +IR R AS++ DE AS + EE +T RL N+P
Subjt: NPSHSINGDINLFLSRSSPSLLSTSLSHNPSI---SIRAKRTAKLVFQFASTSQDEAVAS-------------SPSDTEEFSRT--------RLLAQNVP
Query: WNSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKL----KKEKPSPPVKPNPVTF-----NLFV
+ T ++ +F + GTV+DV++ +Y+K+ R+RG FVTMGS EEA A+ S + GRT+K+N+ ++ + E ++ N ++ ++
Subjt: WNSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKL----KKEKPSPPVKPNPVTF-----NLFV
Query: ANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRV----ARSKQFVKLP--EEKSPSEVTSTDGV
NL + ++ L++ F G V+ A++I+ N RS G+GF++F++ ++ ++A++ G GRALR+ R K V P EE E +
Subjt: ANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRV----ARSKQFVKLP--EEKSPSEVTSTDGV
Query: ELANAAA
L+N +A
Subjt: ELANAAA
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.8e-19 | 31.17 | Show/hide |
Query: NPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELS
N H N N L R + S L + S S R + ++ + + + AS+ D T+L N+P+N + + + + VE+
Subjt: NPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDTEEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELS
Query: MYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKP-NPVT-FNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFH
+YN+ ++RG AFVTM + E+ ++NL+ E+ GR LK+N+A +KP P +P P T LFV NL + ++ L F G+VV A+++F
Subjt: MYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKPSPPVKP-NPVT-FNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFH
Query: ENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRV--ARSKQF
+ RS GYGFV + +K + E A+ G GRA+RV A+ K+F
Subjt: ENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRV--ARSKQF
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| AT2G35410.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 8.7e-32 | 34.8 | Show/hide |
Query: AHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLS------HNPSISIR--AKRTAKLVFQFASTSQDEAVASSPSDTEEFS--------RTRLLAQNVPW
A LS S S + LF RSS SL T+LS +P S+R + + +LV S ++ E A + EE + + +L N+PW
Subjt: AHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLS------HNPSISIR--AKRTAKLVFQFASTSQDEAVASSPSDTEEFS--------RTRLLAQNVPW
Query: NSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYA-KLKKEKPS-----PPVKPNPVTFNLFVANLPFE
+ + DI LF + GTV +VE+ +NRG AFVTM S EEA AA++ ++++ GR + +++A + KK P P P L+V+NL ++
Subjt: NSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYA-KLKKEKPS-----PPVKPNPVTFNLFVANLPFE
Query: ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLPEEKSPSEVTSTDGVELANAAAE
AR+ LRE F + N VSA+++F + RSSGYGFV+F T+++AE AI++ GK MGR + + S +S SE D VE NA+ +
Subjt: ARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKLPEEKSPSEVTSTDGVELANAAAE
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| AT3G52380.1 chloroplast RNA-binding protein 33 | 1.7e-19 | 28.34 | Show/hide |
Query: NPSHSINGDINLFLSRSSPSLLSTSLSHNPSI---SIRAKRTAKLVFQFASTSQDEAVAS-------------SPSDTEEFSRT--------RLLAQNVP
NP S + + LF + S + NP I +IR R AS++ DE AS + EE +T RL N+P
Subjt: NPSHSINGDINLFLSRSSPSLLSTSLSHNPSI---SIRAKRTAKLVFQFASTSQDEAVAS-------------SPSDTEEFSRT--------RLLAQNVP
Query: WNSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKL----KKEKPSPPVKPNPVTF-----NLFV
+ T ++ +F + GTV+DV++ +Y+K+ R+RG FVTMGS EEA A+ S + GRT+K+N+ ++ + E ++ N ++ ++
Subjt: WNSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKL----KKEKPSPPVKPNPVTF-----NLFV
Query: ANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRV----ARSKQFVKLP--EEKSPSEVTSTDGV
NL + ++ L++ F G V+ A++I+ N RS G+GF++F++ ++ ++A++ G GRALR+ R K V P EE E +
Subjt: ANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRV----ARSKQFVKLP--EEKSPSEVTSTDGV
Query: ELANAAA
L+N +A
Subjt: ELANAAA
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| AT4G09040.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.2e-74 | 53.92 | Show/hide |
Query: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDT------
MAL+RLP S L H S +NP+ ++ N LS S+PSL SI AK + L F++T+Q+ + SS S +
Subjt: MALVRLPCSSSSTFLRSKQQHPIFLAHLSCPQNPSHSINGDINLFLSRSSPSLLSTSLSHNPSISIRAKRTAKLVFQFASTSQDEAVASSPSDT------
Query: -EEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKP-SPPVKPNPV-
EE S+TRL+AQNVPW STPEDIRSLFEKYG+V+D+E+SM+ K RNRGL F+ M SPEEA AL +LES E+EGR LK++YAK KK+K +P P+PV
Subjt: -EEFSRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKP-SPPVKPNPV-
Query: TFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKL--------PEEKSPS
TFNLFVANL FEARAK L+EFFD+ +GNVVS ++IFHENPRRSSGYGFV+FKTKK AEAA+ EFQGK F+GR +R+A+SKQFVKL PEE++
Subjt: TFNLFVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKL--------PEEKSPS
Query: EVTSTD
E + ++
Subjt: EVTSTD
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| AT4G09040.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.4e-69 | 65.84 | Show/hide |
Query: SRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKP-SPPVKPNPV-TFNL
S+TRL+AQNVPW STPEDIRSLFEKYG+V+D+E+SM+ K RNRGL F+ M SPEEA AL +LES E+EGR LK++YAK KK+K +P P+PV TFNL
Subjt: SRTRLLAQNVPWNSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLKLNYAKLKKEKP-SPPVKPNPV-TFNL
Query: FVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKL--------PEEKSPSEVTS
FVANL FEARAK L+EFFD+ +GNVVS ++IFHENPRRSSGYGFV+FKTKK AEAA+ EFQGK F+GR +R+A+SKQFVKL PEE++ E +
Subjt: FVANLPFEARAKDLREFFDSGSGNVVSAQIIFHENPRRSSGYGFVAFKTKKDAEAAISEFQGKIFMGRALRVARSKQFVKL--------PEEKSPSEVTS
Query: TD
++
Subjt: TD
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