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Lag0037417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTPR_REGION domain-containing protein
Genome locationchr2:6033422..6034169
RNA-Seq ExpressionLag0037417
SyntenyLag0037417
Gene Ontology termsGO:0030246 - carbohydrate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582196.1 Sperm-associated antigen 1A, partial [Cucurbita argyrosperma subsp. sororia]2.1e-5684.72Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIVE
        MNSN GKNF+FDLG G SRSKSLNDQKNKTPSYSSYASS  SYSSTQTRPA QPNKPSWTHQ A+P L+N P++MVGDIFGKSW STANSG+ AGIGIVE
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIVE

Query:  KNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF
        KNPNLFGDLVSS+LGSGKSN NAPLKNAAPASVSS AA N NSF
Subjt:  KNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF

XP_008438908.1 PREDICTED: epidermal growth factor receptor substrate 15 homolog [Cucumis melo]2.1e-5683.89Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTH-----QAARPTLSNSPATMVGDIFGKSWGSTANSGSNAG
        MNSNFGKNFEFDLG G SRSKSLNDQKNKT SYSSY SS  SYSST TRPA QPNKPSWTH     QAARP LSNSPA+MVGDIFGK+WGSTA SGS AG
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTH-----QAARPTLSNSPATMVGDIFGKSWGSTANSGSNAG

Query:  IGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF
        IGIVEKNPNLFGDLV SALGSGKSN+N PLKN  PASVSS AALNRNSF
Subjt:  IGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF

XP_022137927.1 P17/29C-like protein DDB_G0287399 [Momordica charantia]5.5e-5785.71Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPA-GQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIV
        MNSNFGKNFEFDLG G S SKSLNDQKNK+PSYSSYASSGPSYSSTQTRPA  QP++ SWTHQAARPTLSN+P++MVGDIFGKSWGST NSGS AGIGI 
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPA-GQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIV

Query:  EKNPNLFGDLVSSALGSGKSNTNAPLKNAAP--ASVSSSAALNRNSF
        EKNPNLFGDLVSSALGSGKSNTN+PLKNA P  AS SS+AALNRNSF
Subjt:  EKNPNLFGDLVSSALGSGKSNTNAPLKNAAP--ASVSSSAALNRNSF

XP_022979766.1 uncharacterized protein LOC111479374 [Cucurbita maxima]2.1e-5685.42Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIVE
        MNSN GKNF+FDLG G SRSKSLNDQKNKTPSYSSYASS  SYSSTQTRPA QPNKPSWTHQ A+P L+N P +MVGDIFGKSW STANSGS AGIGIVE
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIVE

Query:  KNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF
        KNPNLFGDLVSS+LGSGKSN NAPLKNAAPASVSS AA N NSF
Subjt:  KNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF

XP_038901127.1 cell wall protein RBR3 [Benincasa hispida]7.1e-5785.33Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTP-SYSSYASSGPSYSSTQTRPAGQPNKPSWTH-----QAARPTLSNSPATMVGDIFGKSWGSTANSGSNA
        MNSNFGKNFEFDLG G SRSKSLNDQKNKTP SYSSYASSG SYSSTQTRPA QPNKPSWTH     QAA P LSNSPA+MVGDIFGK+WGSTA SGS A
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTP-SYSSYASSGPSYSSTQTRPAGQPNKPSWTH-----QAARPTLSNSPATMVGDIFGKSWGSTANSGSNA

Query:  GIGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF
        GIGIVEKNPNLFGDLV SALGS KSN+N PLKNAAPASVSS+AALN+NSF
Subjt:  GIGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF

TrEMBL top hitse value%identityAlignment
A0A1S3AXK7 epidermal growth factor receptor substrate 15 homolog1.0e-5683.89Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTH-----QAARPTLSNSPATMVGDIFGKSWGSTANSGSNAG
        MNSNFGKNFEFDLG G SRSKSLNDQKNKT SYSSY SS  SYSST TRPA QPNKPSWTH     QAARP LSNSPA+MVGDIFGK+WGSTA SGS AG
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTH-----QAARPTLSNSPATMVGDIFGKSWGSTANSGSNAG

Query:  IGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF
        IGIVEKNPNLFGDLV SALGSGKSN+N PLKN  PASVSS AALNRNSF
Subjt:  IGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF

A0A5D3D165 Epidermal growth factor receptor substrate 15-like protein1.0e-5683.89Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTH-----QAARPTLSNSPATMVGDIFGKSWGSTANSGSNAG
        MNSNFGKNFEFDLG G SRSKSLNDQKNKT SYSSY SS  SYSST TRPA QPNKPSWTH     QAARP LSNSPA+MVGDIFGK+WGSTA SGS AG
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTH-----QAARPTLSNSPATMVGDIFGKSWGSTANSGSNAG

Query:  IGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF
        IGIVEKNPNLFGDLV SALGSGKSN+N PLKN  PASVSS AALNRNSF
Subjt:  IGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF

A0A6J1C9M7 P17/29C-like protein DDB_G02873992.7e-5785.71Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPA-GQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIV
        MNSNFGKNFEFDLG G S SKSLNDQKNK+PSYSSYASSGPSYSSTQTRPA  QP++ SWTHQAARPTLSN+P++MVGDIFGKSWGST NSGS AGIGI 
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPA-GQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIV

Query:  EKNPNLFGDLVSSALGSGKSNTNAPLKNAAP--ASVSSSAALNRNSF
        EKNPNLFGDLVSSALGSGKSNTN+PLKNA P  AS SS+AALNRNSF
Subjt:  EKNPNLFGDLVSSALGSGKSNTNAPLKNAAP--ASVSSSAALNRNSF

A0A6J1GV19 nuclear pore complex protein NUP62-like5.0e-5684.72Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIVE
        MNSN GKNF+FDLG G SRSKSLNDQKNKTPSYSSYASS  SYSSTQTRPA QPNKPSWTHQ A+P LSN P++MVGDIFGKSW STANSGS A IGIVE
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIVE

Query:  KNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF
        KNPNLFGDLVSS+LGSGKSN NAPLKNAAPASVS  AA N NSF
Subjt:  KNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF

A0A6J1IRP5 uncharacterized protein LOC1114793741.0e-5685.42Show/hide
Query:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIVE
        MNSN GKNF+FDLG G SRSKSLNDQKNKTPSYSSYASS  SYSSTQTRPA QPNKPSWTHQ A+P L+N P +MVGDIFGKSW STANSGS AGIGIVE
Subjt:  MNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIVE

Query:  KNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF
        KNPNLFGDLVSS+LGSGKSN NAPLKNAAPASVSS AA N NSF
Subjt:  KNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRNSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G16760.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.5e-3254.67Show/hide
Query:  MNSNFGK-------NFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAA------RPTLSNSPATMVGDIFGKSWGST
        MNSNFGK       +F+FDLG G S+ + LN QK++T SYSS        S++Q RPA QP KPSWTHQ A      R  + + P +MVGDI GK+WGS 
Subjt:  MNSNFGK-------NFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAA------RPTLSNSPATMVGDIFGKSWGST

Query:  ANSGSNAGIGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSA
          SGS +GIGIV K+P+LFGDLV SA+G GKS+ N PLKNA P S S S+
Subjt:  ANSGSNAGIGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSA

AT3G16760.2 Tetratricopeptide repeat (TPR)-like superfamily protein6.5e-3254.67Show/hide
Query:  MNSNFGK-------NFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAA------RPTLSNSPATMVGDIFGKSWGST
        MNSNFGK       +F+FDLG G S+ + LN QK++T SYSS        S++Q RPA QP KPSWTHQ A      R  + + P +MVGDI GK+WGS 
Subjt:  MNSNFGK-------NFEFDLGRGPSRSKSLNDQKNKTPSYSSYASSGPSYSSTQTRPAGQPNKPSWTHQAA------RPTLSNSPATMVGDIFGKSWGST

Query:  ANSGSNAGIGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSA
          SGS +GIGIV K+P+LFGDLV SA+G GKS+ N PLKNA P S S S+
Subjt:  ANSGSNAGIGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGGCGGCGGCGGTCGCCGGATTTTTTTTTTTTTTTTTTTCTTTCTTCTTCTTCTTTTCTTCTTCTCTTCTTTGGAATCCTGTTCTGCGCTACCGTCCTAACTC
CTCCACCCCATTTCTACCTATATTCCGCCGCATCTTCCACCGCCGCCGCCTCCTTCCACCGTCGTCGGATCTAGAGGCTGTTCTCGATTCCATTGCTTCAATTCCCGATC
TCATCCGCTTAGCCATGAATTCTAATTTCGGAAAGAATTTCGAGTTCGATTTGGGACGCGGACCCTCTCGCTCCAAATCACTCAACGATCAGAAAAACAAAACCCCATCG
TATTCTTCATACGCTTCCTCTGGTCCTTCGTATTCGTCGACACAGACGAGACCGGCCGGGCAGCCTAACAAGCCCTCATGGACGCATCAGGCGGCGCGGCCTACCTTGTC
CAATTCGCCCGCTACCATGGTCGGTGATATATTTGGGAAGAGCTGGGGTTCGACGGCGAACTCTGGTTCCAATGCGGGCATTGGAATCGTTGAAAAGAATCCGAATCTGT
TCGGCGATTTGGTCAGTTCTGCCTTGGGATCGGGCAAGAGTAATACGAATGCTCCATTGAAGAATGCGGCTCCGGCATCGGTGTCATCGAGTGCTGCATTGAATAGGAAT
TCGTTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGGCGGCGGCGGTCGCCGGATTTTTTTTTTTTTTTTTTTCTTTCTTCTTCTTCTTTTCTTCTTCTCTTCTTTGGAATCCTGTTCTGCGCTACCGTCCTAACTC
CTCCACCCCATTTCTACCTATATTCCGCCGCATCTTCCACCGCCGCCGCCTCCTTCCACCGTCGTCGGATCTAGAGGCTGTTCTCGATTCCATTGCTTCAATTCCCGATC
TCATCCGCTTAGCCATGAATTCTAATTTCGGAAAGAATTTCGAGTTCGATTTGGGACGCGGACCCTCTCGCTCCAAATCACTCAACGATCAGAAAAACAAAACCCCATCG
TATTCTTCATACGCTTCCTCTGGTCCTTCGTATTCGTCGACACAGACGAGACCGGCCGGGCAGCCTAACAAGCCCTCATGGACGCATCAGGCGGCGCGGCCTACCTTGTC
CAATTCGCCCGCTACCATGGTCGGTGATATATTTGGGAAGAGCTGGGGTTCGACGGCGAACTCTGGTTCCAATGCGGGCATTGGAATCGTTGAAAAGAATCCGAATCTGT
TCGGCGATTTGGTCAGTTCTGCCTTGGGATCGGGCAAGAGTAATACGAATGCTCCATTGAAGAATGCGGCTCCGGCATCGGTGTCATCGAGTGCTGCATTGAATAGGAAT
TCGTTTCCTTAA
Protein sequenceShow/hide protein sequence
MAAAAAVAGFFFFFFSFFFFFSSSLLWNPVLRYRPNSSTPFLPIFRRIFHRRRLLPPSSDLEAVLDSIASIPDLIRLAMNSNFGKNFEFDLGRGPSRSKSLNDQKNKTPS
YSSYASSGPSYSSTQTRPAGQPNKPSWTHQAARPTLSNSPATMVGDIFGKSWGSTANSGSNAGIGIVEKNPNLFGDLVSSALGSGKSNTNAPLKNAAPASVSSSAALNRN
SFP