; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037505 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037505
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like domain containing protein
Genome locationchr2:6832600..6835421
RNA-Seq ExpressionLag0037505
SyntenyLag0037505
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015384866.1 uncharacterized protein LOC107176592 [Citrus sinensis]3.6e-1233.33Show/hide
Query:  SRGENHP--SQVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMG
        S G ++P  SQ W PP  + +K N DA+ N  +G  GLG ++RDS    + A +   K    +K+ EA+A+  GL   KN   + L++E  +DC ++   
Subjt:  SRGENHP--SQVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMG

Query:  VNNVDDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARV
        +NN +   +E+   +  I D  K    ++F+Y+PR  N  AH+LA++
Subjt:  VNNVDDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARV

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]7.2e-1333.57Show/hide
Query:  RGENHPSQVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNN
        R E++    W PP  + WKLN++A+W +    GG+GWI+RD  G  + A    I+ +  +  LE  A+ EGL++++     P+ +E+DS  LE I  ++ 
Subjt:  RGENHPSQVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNN

Query:  VDDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR
           D +E+   +E I    K +  V+  +  R  N VAH LAR
Subjt:  VDDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR

XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]2.1e-1238.03Show/hide
Query:  ENHPSQV-WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNV
        +N P  V W+PP  H WKLN DA+W      GGLGWIVRDS G  + AE ++   Q       +  L  G+K           IE +SDCLE++  +N  
Subjt:  ENHPSQV-WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNV

Query:  DDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR
           L+E+   VE I    +SL    F + P   N VAH +AR
Subjt:  DDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]3.2e-1339.26Show/hide
Query:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPG-NPLVIEADSDCLELIMGVNNVDDDLSEM
        W PP  H W LN+DASW+    RGG+GWI+R   G  V A    ++    +K+LEA A+LEGL++L N+    PL IE DS  +E ++  N   +DL++ 
Subjt:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPG-NPLVIEADSDCLELIMGVNNVDDDLSEM

Query:  KSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR
           VE I++   S   + F    R  N  AH+LA+
Subjt:  KSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]2.1e-1236.43Show/hide
Query:  QVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDLSE
        Q W PP  + +K+N DA++NS     G+G ++RDS G  V A + +   +    + EA+A+L GL+  +N   + L+IE  SDCLE++  VNN     SE
Subjt:  QVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDLSE

Query:  MKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARVGAG
        +   + AI +  K    V  N+ PR  N  AH LA++  G
Subjt:  MKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARVGAG

TrEMBL top hitse value%identityAlignment
A0A5C7ITL2 RNase H domain-containing protein1.9e-1132.39Show/hide
Query:  PSQVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDL
        P   WSPP   C+K+NSDA+    +GR G+G ++RDS G    +        +P ++ E  A+L G +    +   P V+E  SD L ++  V      L
Subjt:  PSQVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDL

Query:  SEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARVGAG
        SE+   ++ I++   S    +  + PRL N V H LAR+  G
Subjt:  SEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARVGAG

A0A6J1CP26 uncharacterized protein LOC1110134123.5e-1333.57Show/hide
Query:  RGENHPSQVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNN
        R E++    W PP  + WKLN++A+W +    GG+GWI+RD  G  + A    I+ +  +  LE  A+ EGL++++     P+ +E+DS  LE I  ++ 
Subjt:  RGENHPSQVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNN

Query:  VDDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR
           D +E+   +E I    K +  V+  +  R  N VAH LAR
Subjt:  VDDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR

A0A6J1D4B6 uncharacterized protein LOC1110171811.0e-1238.03Show/hide
Query:  ENHPSQV-WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNV
        +N P  V W+PP  H WKLN DA+W      GGLGWIVRDS G  + AE ++   Q       +  L  G+K           IE +SDCLE++  +N  
Subjt:  ENHPSQV-WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNV

Query:  DDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR
           L+E+   VE I    +SL    F + P   N VAH +AR
Subjt:  DDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR

A0A6J1DNV9 uncharacterized protein LOC1110224031.6e-1339.26Show/hide
Query:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPG-NPLVIEADSDCLELIMGVNNVDDDLSEM
        W PP  H W LN+DASW+    RGG+GWI+R   G  V A    ++    +K+LEA A+LEGL++L N+    PL IE DS  +E ++  N   +DL++ 
Subjt:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPG-NPLVIEADSDCLELIMGVNNVDDDLSEM

Query:  KSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR
           VE I++   S   + F    R  N  AH+LA+
Subjt:  KSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR

A0A6J1DSV1 uncharacterized protein LOC1110236083.8e-1232.86Show/hide
Query:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPL------VIEADSDCLELIMGVNNVDD
        W PP  + WKLN+DA+W +    GG+GWI+RD  G  + A+   I+ +  +  LE  A+ EGL++++     P+       I  +SD LE I  ++    
Subjt:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPL------VIEADSDCLELIMGVNNVDD

Query:  DLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR
        D +E+   +E I    + +  V+  +  R  N VAH LAR
Subjt:  DLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-0726.76Show/hide
Query:  ENHPSQVWSPPDPHCW-KLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNV
        E + S  W  P P+ W K N+DA+W     R G+GWI+R+  G  +      +     +   E +AL   + ++       ++ E+D+  L   + + N 
Subjt:  ENHPSQVWSPPDPHCW-KLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNV

Query:  DDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR
        DD    ++  +E I         V F ++PR  N VA  +AR
Subjt:  DDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR

AT3G09510.1 Ribonuclease H-like superfamily protein4.5e-0528.68Show/hide
Query:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDLSEMK
        W  P     K N DA ++  +     GWI+R+  G+P+    M++         E KALL  L+    I G   V   + DC  LI  +N +    S + 
Subjt:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDLSEMK

Query:  SFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARVG
        + +E I   A     + F +  R  N +AH LA+ G
Subjt:  SFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARVG

AT4G29090.1 Ribonuclease H-like superfamily protein1.9e-0827.41Show/hide
Query:  WSPPDPHCW-KLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDLSEM
        W PP PH W K N+DA+WN    R G+GW++R+  G         +     +   E +A+   + SL     N ++ E+DS   ++++ + N D+    +
Subjt:  WSPPDPHCW-KLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDLSEM

Query:  KSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR
        K  ++ +         V F + PR  N +A  +AR
Subjt:  KSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALAR

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.2e-0723.65Show/hide
Query:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDLSEMK
        WSPP     K N DAS +      GLGWI+R+S G+ +   + + + +   +  E   L+  +++        ++ E D+  +  ++   + +  L    
Subjt:  WSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKDQWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDLSEMK

Query:  SFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARVGAGLDRQHGFFVS
          +++ I S +S   + F++  R QN  A  LA+     + Q   F S
Subjt:  SFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARVGAGLDRQHGFFVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCTTTTAGCACTACTGGGCTTGGGCTCAATAATCTCTCTCTCTATAGTTCAACAATATTCCAGATCGGGGATTCAAACCTCCAATATATTCTGGTTGACACATC
TCAATTGTCGCTGAGCTATGTTCATGGGTACCTAGCCATTGCAGAAGATTCAAGGGGGGAGAACCACCCGAGTCAAGTCTGGTCACCGCCGGATCCTCATTGTTGGAAAT
TGAACTCCGACGCCTCTTGGAATTCAATAGAAGGTAGAGGAGGGCTGGGGTGGATTGTGCGTGACTCTGGAGGGTCTCCCGTTTGTGCTGAAATCATGGAAATTAAAGAC
CAATGGCCTATGAAGATCCTTGAAGCCAAAGCTCTTTTGGAAGGGTTAAAGAGTTTGAAGAACATACCTGGAAATCCCCTGGTGATTGAAGCAGATTCCGATTGTTTGGA
GCTCATTATGGGAGTGAACAACGTTGACGACGATCTGTCGGAGATGAAGAGCTTCGTGGAAGCCATCATCGACTCAGCGAAATCCCTTGGGCCCGTCAATTTCAATTACA
GCCCAAGATTGCAAAACGACGTTGCACATGCGCTAGCTCGCGTGGGTGCTGGTCTGGATCGCCAACATGGTTTTTTTGTTTCGAAGCAGAGGCACCCTTCTATGCTAAAA
GGTTTCGGTTATTTTTGGTCCTCTGGCTTCCCGCCTTTTATCTCCTCCCTTATTCGGGAGGACCTCTGTACTGATCACTCTTCCTATTCTGTTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCTTTTAGCACTACTGGGCTTGGGCTCAATAATCTCTCTCTCTATAGTTCAACAATATTCCAGATCGGGGATTCAAACCTCCAATATATTCTGGTTGACACATC
TCAATTGTCGCTGAGCTATGTTCATGGGTACCTAGCCATTGCAGAAGATTCAAGGGGGGAGAACCACCCGAGTCAAGTCTGGTCACCGCCGGATCCTCATTGTTGGAAAT
TGAACTCCGACGCCTCTTGGAATTCAATAGAAGGTAGAGGAGGGCTGGGGTGGATTGTGCGTGACTCTGGAGGGTCTCCCGTTTGTGCTGAAATCATGGAAATTAAAGAC
CAATGGCCTATGAAGATCCTTGAAGCCAAAGCTCTTTTGGAAGGGTTAAAGAGTTTGAAGAACATACCTGGAAATCCCCTGGTGATTGAAGCAGATTCCGATTGTTTGGA
GCTCATTATGGGAGTGAACAACGTTGACGACGATCTGTCGGAGATGAAGAGCTTCGTGGAAGCCATCATCGACTCAGCGAAATCCCTTGGGCCCGTCAATTTCAATTACA
GCCCAAGATTGCAAAACGACGTTGCACATGCGCTAGCTCGCGTGGGTGCTGGTCTGGATCGCCAACATGGTTTTTTTGTTTCGAAGCAGAGGCACCCTTCTATGCTAAAA
GGTTTCGGTTATTTTTGGTCCTCTGGCTTCCCGCCTTTTATCTCCTCCCTTATTCGGGAGGACCTCTGTACTGATCACTCTTCCTATTCTGTTTTATGA
Protein sequenceShow/hide protein sequence
MWSFSTTGLGLNNLSLYSSTIFQIGDSNLQYILVDTSQLSLSYVHGYLAIAEDSRGENHPSQVWSPPDPHCWKLNSDASWNSIEGRGGLGWIVRDSGGSPVCAEIMEIKD
QWPMKILEAKALLEGLKSLKNIPGNPLVIEADSDCLELIMGVNNVDDDLSEMKSFVEAIIDSAKSLGPVNFNYSPRLQNDVAHALARVGAGLDRQHGFFVSKQRHPSMLK
GFGYFWSSGFPPFISSLIREDLCTDHSSYSVL