; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037561 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037561
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:7280318..7281958
RNA-Seq ExpressionLag0037561
SyntenyLag0037561
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW74143.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]4.4e-2332.3Show/hide
Query:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVYVIL-----VASGGHK
        EWA L + GASGGIL+MWDS ++   EVVLG FSVS+ F  +  +  W+S VYGP     R+            S   W +   + ++        GG  
Subjt:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVYVIL-----VASGGHK

Query:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRAR---SRIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPP----
        T SM+  +DFI ++ L+DPPL +  FTW+N +      R+DRFL+S  W        ++L P+SLQ + P +     S    + L++    W   P    
Subjt:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRAR---SRIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPP----

Query:  ---LNLPS---LLGGVWK-FMAIGNDS---------ALVTLKVWNREVCGDAIIRSR
           L+ PS   + G  W+ F   G +              LK WN+   GD I R +
Subjt:  ---LNLPS---LLGGVWK-FMAIGNDS---------ALVTLKVWNREVCGDAIIRSR

VVA21938.1 Hypothetical predicted protein, partial [Prunus dulcis]6.7e-2433.33Show/hide
Query:  GASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHKTKSMRRFN
        G SGGI +MW+S   S+ +  +G+FSVSI     +G   W+SG+YGP  PR R              G  W I      + +V   ++GG  T SM+ FN
Subjt:  GASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHKTKSMRRFN

Query:  DFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLPSLLGGVWK
        DFI+D++L DP L+N  FTW+N R  +   R+DRFLFS+ W + +  V+     R      P            + LD+    W   P          ++
Subjt:  DFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLPSLLGGVWK

Query:  FMAIGNDSALVTLKVWNREVCGDAI
        F  I   +    +KVWN+EV GD +
Subjt:  FMAIGNDSALVTLKVWNREVCGDAI

VVA41200.1 PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis]7.2e-2633.48Show/hide
Query:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHK
        EW    S G SGGI +MW+S   S+ +  +G+FSVSI     +G   W+SG+YGP  PR R              G  W I      + +V   ++GG  
Subjt:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHK

Query:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLP
        T SM+ FNDFI+D++L DP L+N  FTW+N R  +   R+DRFLFS+ W + +  V+     R      P            + LD+    W   P    
Subjt:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLP

Query:  SLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI
              ++F  I   +    +KVWN+EV GD +
Subjt:  SLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]1.4e-2442.59Show/hide
Query:  WAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVY-VILVAS----GGHKT
        WA L S G SGGILIMWD   VS  EVV+G FS+SI F + +    W++GVYGP RP  R+               +W +   + V+ +AS    G    
Subjt:  WAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVY-VILVAS----GGHKT

Query:  KSMRRFNDFIEDSHLVDPPLVNGRFTWAN---SRARSRIDRFLFSKGWMEVYGFVRQELGPR
        +SMR F+ FI +  L+DPPL N RFTW+N   +R   R+DRFL + GW E++  +R+E+ PR
Subjt:  KSMRRFNDFIEDSHLVDPPLVNGRFTWAN---SRARSRIDRFLFSKGWMEVYGFVRQELGPR

XP_028093340.1 uncharacterized protein LOC114293463 [Camellia sinensis]4.4e-2341.98Show/hide
Query:  WAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVY-VILVAS----GGHKT
        WA L S G SGGILIMWD   VS  EVV G FS+SI F + +    W++GVYGP +P  R+               +W +   + V+ +AS    G   +
Subjt:  WAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVY-VILVAS----GGHKT

Query:  KSMRRFNDFIEDSHLVDPPLVNGRFTWAN---SRARSRIDRFLFSKGWMEVYGFVRQELGPR
        +SMR F+ FI D  L+D PL N RFTW+N   +R   ++DRFL + G  E++  +RQE+GPR
Subjt:  KSMRRFNDFIEDSHLVDPPLVNGRFTWAN---SRARSRIDRFLFSKGWMEVYGFVRQELGPR

TrEMBL top hitse value%identityAlignment
A0A438GPL3 Transposon TX1 uncharacterized 149 kDa protein2.1e-2332.3Show/hide
Query:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVYVIL-----VASGGHK
        EWA L + GASGGIL+MWDS ++   EVVLG FSVS+ F  +  +  W+S VYGP     R+            S   W +   + ++        GG  
Subjt:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVYVIL-----VASGGHK

Query:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRAR---SRIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPP----
        T SM+  +DFI ++ L+DPPL +  FTW+N +      R+DRFL+S  W        ++L P+SLQ + P +     S    + L++    W   P    
Subjt:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRAR---SRIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPP----

Query:  ---LNLPS---LLGGVWK-FMAIGNDS---------ALVTLKVWNREVCGDAIIRSR
           L+ PS   + G  W+ F   G +              LK WN+   GD I R +
Subjt:  ---LNLPS---LLGGVWK-FMAIGNDS---------ALVTLKVWNREVCGDAIIRSR

A0A5E4F859 Reverse transcriptase domain-containing protein (Fragment)3.2e-2433.33Show/hide
Query:  GASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHKTKSMRRFN
        G SGGI +MW+S   S+ +  +G+FSVSI     +G   W+SG+YGP  PR R              G  W I      + +V   ++GG  T SM+ FN
Subjt:  GASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHKTKSMRRFN

Query:  DFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLPSLLGGVWK
        DFI+D++L DP L+N  FTW+N R  +   R+DRFLFS+ W + +  V+     R      P            + LD+    W   P          ++
Subjt:  DFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLPSLLGGVWK

Query:  FMAIGNDSALVTLKVWNREVCGDAI
        F  I   +    +KVWN+EV GD +
Subjt:  FMAIGNDSALVTLKVWNREVCGDAI

A0A5E4GN72 PREDICTED: RNA-directed DNA polymerase (Fragment)3.5e-2633.48Show/hide
Query:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHK
        EW    S G SGGI +MW+S   S+ +  +G+FSVSI     +G   W+SG+YGP  PR R              G  W I      + +V   ++GG  
Subjt:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHK

Query:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLP
        T SM+ FNDFI+D++L DP L+N  FTW+N R  +   R+DRFLFS+ W + +  V+     R      P            + LD+    W   P    
Subjt:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLP

Query:  SLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI
              ++F  I   +    +KVWN+EV GD +
Subjt:  SLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI

A0A803QQM3 Uncharacterized protein1.6e-2338.46Show/hide
Query:  GFCWRVE---WAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVYVILVAS
        G  WR     W  L + G SGG L++WD+  +SV++ ++G+FS+S+L ++E  +P W SGVYGP   + R              G SW +   + +    
Subjt:  GFCWRVE---WAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAIFLVYVILVAS

Query:  G-----GHKTKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRAR---SRIDRFLFSKGWMEVYGFVRQEL
        G        T+SM+ F+  I +  L+DP L NG FTW+N RA    SR+DRFLFS  W  +Y FVRQE+
Subjt:  G-----GHKTKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRAR---SRIDRFLFSKGWMEVYGFVRQEL

M5XUF8 Reverse transcriptase domain-containing protein (Fragment)1.5e-2432.19Show/hide
Query:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHK
        EW    S G SGGI++MW+S  +S+ +  +G+FSVSI     +G   W+SG+YG   PR R              G  W I      + +V   ++GG  
Subjt:  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP-----------SGRSWAI-----FLVYVILVASGGHK

Query:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLP
        T SM+ FNDFI+D++L DP L+N  FTW+N R  +   R+DRFLF + W + +  V+                 L      H P+   T      P    
Subjt:  TKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLP

Query:  SLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI
            G ++F  I   +    +K WN+EV GD +
Subjt:  SLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACAGACCGTCCAACCAACGAACTCTCATTCTCAGACCATTGTCGAGCCTGTCAGTGTATCGTGGGGGGCAGAGGGTTTGCCTAATTCCATGATTGTCAATGCCGT
AGGATGTAGTCTAGAGGGGGGACACTCACCACTTCCTGATGGGGTTTCTGAGGGCGGTATTTTATCTTTTCCTAGTTCGACTTGTCCTCCAAGTGTAAACCCAATCGGGG
AGATTCAATATTTGTCCAGAGGGCTGGGCTGCTATGGATTCTGTTGGAGAGTGGAGTGGGCTGGCCTCGAATCTGACGGAGCTTCTGGGGGCATTCTTATCATGTGGGAT
AGCCTTAGGGTTTCGGTGATTGAAGTAGTTCTGGGCCAGTTCTCCGTTTCCATTCTGTTTCATTCTGAGAATGGGGATCCTAGATGGATTTCTGGCGTCTATGGCCCTCC
TAGGCCGAGGGGTAGGGAGCCTTCTGGGAGGAGTTGGGCGATCTTTCTAGTTTATGTAATCCTTGTTGCTTCCGGGGGTCACAAGACGAAGTCTATGCGAAGATTCAATG
ATTTCATCGAAGACAGTCATCTTGTGGATCCTCCCTTGGTTAACGGGCGATTCACTTGGGCCAATAGTAGGGCTAGAAGTAGAATCGATAGATTCTTGTTCTCTAAAGGT
TGGATGGAAGTTTATGGGTTTGTGAGACAAGAACTAGGTCCTCGGTCACTTCAGATCATTGGCCCCTCTTTTGTAAGATTGAAGCTGTCAGTTGGGGTCCATGTCCCTTT
AGATTCGAGAACATGTGGTTGGATCACCCCTCCTTTAAATCTTCCTTCCCTTCTTGGTGGAGTTTGGAAGTTCATGGCAATTGGGAATGATTCCGCTTTAGTGACGCTCA
AAGTGTGGAATCGGGAGGTGTGCGGAGATGCAATAATAAGAAGCAGGAGATTCTGGGTAGGATTAAAATCATTGACGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACAGACCGTCCAACCAACGAACTCTCATTCTCAGACCATTGTCGAGCCTGTCAGTGTATCGTGGGGGGCAGAGGGTTTGCCTAATTCCATGATTGTCAATGCCGT
AGGATGTAGTCTAGAGGGGGGACACTCACCACTTCCTGATGGGGTTTCTGAGGGCGGTATTTTATCTTTTCCTAGTTCGACTTGTCCTCCAAGTGTAAACCCAATCGGGG
AGATTCAATATTTGTCCAGAGGGCTGGGCTGCTATGGATTCTGTTGGAGAGTGGAGTGGGCTGGCCTCGAATCTGACGGAGCTTCTGGGGGCATTCTTATCATGTGGGAT
AGCCTTAGGGTTTCGGTGATTGAAGTAGTTCTGGGCCAGTTCTCCGTTTCCATTCTGTTTCATTCTGAGAATGGGGATCCTAGATGGATTTCTGGCGTCTATGGCCCTCC
TAGGCCGAGGGGTAGGGAGCCTTCTGGGAGGAGTTGGGCGATCTTTCTAGTTTATGTAATCCTTGTTGCTTCCGGGGGTCACAAGACGAAGTCTATGCGAAGATTCAATG
ATTTCATCGAAGACAGTCATCTTGTGGATCCTCCCTTGGTTAACGGGCGATTCACTTGGGCCAATAGTAGGGCTAGAAGTAGAATCGATAGATTCTTGTTCTCTAAAGGT
TGGATGGAAGTTTATGGGTTTGTGAGACAAGAACTAGGTCCTCGGTCACTTCAGATCATTGGCCCCTCTTTTGTAAGATTGAAGCTGTCAGTTGGGGTCCATGTCCCTTT
AGATTCGAGAACATGTGGTTGGATCACCCCTCCTTTAAATCTTCCTTCCCTTCTTGGTGGAGTTTGGAAGTTCATGGCAATTGGGAATGATTCCGCTTTAGTGACGCTCA
AAGTGTGGAATCGGGAGGTGTGCGGAGATGCAATAATAAGAAGCAGGAGATTCTGGGTAGGATTAAAATCATTGACGAGCTAG
Protein sequenceShow/hide protein sequence
MQQTVQPTNSHSQTIVEPVSVSWGAEGLPNSMIVNAVGCSLEGGHSPLPDGVSEGGILSFPSSTCPPSVNPIGEIQYLSRGLGCYGFCWRVEWAGLESDGASGGILIMWD
SLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREPSGRSWAIFLVYVILVASGGHKTKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRARSRIDRFLFSKG
WMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLPSLLGGVWKFMAIGNDSALVTLKVWNREVCGDAIIRSRRFWVGLKSLTS