; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037600 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037600
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionplastid transcriptionally active 6
Genome locationchr2:7611953..7614214
RNA-Seq ExpressionLag0037600
SyntenyLag0037600
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]5.4e-18196.15Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP TI+RLRA SISAA+SLPHLPSLPYRKSTPS +PLF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL AA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAA SDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.8e-18296.45Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSP PPATIHRLR PSISAASSL HLPSLPYRKSTPS +PLFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAA S+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]1.7e-18296.45Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP TI+RLRA SISAA+SLPHLPSLPYRKSTPS +PLF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL AA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAA SDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_023534952.1 uncharacterized protein LOC111796527 [Cucurbita pepo subsp. pepo]1.1e-18196.15Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSP PPATIHRLR PSISAASSLPHL S PYRKSTPS +PLFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAA S+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]1.7e-18297.04Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+SSP  PATI+RLRA SISAASSLPHLPSLPYRKSTPSV+PLF PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL AA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAA SDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876138.1e-18396.45Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP TI+RLRA SISAA+SLPHLPSLPYRKSTPS +PLF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL AA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAA SDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A2P5F197 Plastid transcriptionally active protein2.2e-14075.59Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAA--SSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLA
        M +   LLS  SPP ++  L A + +++   S PHL + P  K  PS+ PL       F V +DDGD D GGPDDYDMDDEE+EEVDNKKDFDIEYDPLA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAA--SSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLA

Query:  AAAAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAA+A+   G  ++   ++QS++FVSTQGWDSEM+VDYRINE EFHKISL HCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII
        CA+SDYG YNVTEPPIDAPRDP+YKSE+E++KVFLTKH+RNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVT+P GR RDR++DLLV+RDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        HSSERDDPTTVIE+EEW K+R+DMERHLRKLRDF+ISNWF
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5A7UA32 Uncharacterized protein2.6e-18196.15Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS P PP TI+RLRA SISAA+SLPHLPSLPYRKSTPS +PLF+PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL AA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAA SDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAASSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1F6A7 uncharacterized protein LOC1114425724.9e-18095.59Show/hide
Query:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSP PPATIHRLR PSISAASSL HLPSL YRKSTPS +PLFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAA
Subjt:  MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAAS--SDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAAA+  S+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAS--SDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1IGR4 uncharacterized protein LOC1114770769.9e-18195.61Show/hide
Query:  MNSTVFLLSS--PSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLA
        MNSTVFLLSS  P PPATIHRLR PSISAASSLPHLPSLPYRKSTPS +PLFVPRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LA
Subjt:  MNSTVFLLSS--PSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLA

Query:  AAAAAAAAS--SDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
        AAAAAAAA+  S+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  AAAAAAAAS--SDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRL DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK

Query:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic1.9e-13374.23Show/hide
Query:  APSISAAS--SLPHLPSLPYR-----KSTPSVAPLFVPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAASSDGVG
        +PS+S  S  S P  PS   R     ++    APL +  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA     G G
Subjt:  APSISAAS--SLPHLPSLPYR-----KSTPSVAPLFVPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAASSDGVG

Query:  DENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEP
        D +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEP
Subjt:  DENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEP

Query:  PIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEK
        PIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+
Subjt:  PIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEK

Query:  EEWTKTRQDMERHLRKLRDFSISNWF
        EEWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EEWTKTRQDMERHLRKLRDFSISNWF

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 61.4e-13474.23Show/hide
Query:  APSISAAS--SLPHLPSLPYR-----KSTPSVAPLFVPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAASSDGVG
        +PS+S  S  S P  PS   R     ++    APL +  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA     G G
Subjt:  APSISAAS--SLPHLPSLPYR-----KSTPSVAPLFVPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAASSDGVG

Query:  DENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEP
        D +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEP
Subjt:  DENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEP

Query:  PIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEK
        PIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+
Subjt:  PIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEK

Query:  EEWTKTRQDMERHLRKLRDFSISNWF
        EEWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EEWTKTRQDMERHLRKLRDFSISNWF

AT1G21600.2 plastid transcriptionally active 61.4e-13474.23Show/hide
Query:  APSISAAS--SLPHLPSLPYR-----KSTPSVAPLFVPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAASSDGVG
        +PS+S  S  S P  PS   R     ++    APL +  R      V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA     G G
Subjt:  APSISAAS--SLPHLPSLPYR-----KSTPSVAPLFVPRR--NPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAASSDGVG

Query:  DENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEP
        D +I+ VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEP
Subjt:  DENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEP

Query:  PIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEK
        PIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+
Subjt:  PIDAPRDPLYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEK

Query:  EEWTKTRQDMERHLRKLRDFSISNWF
        EEWTKTR+DME+HLRKLRDFS+SNWF
Subjt:  EEWTKTRQDMERHLRKLRDFSISNWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACCGTCTTCCTCCTCTCTTCGCCGTCGCCGCCGGCCACAATCCACCGCCTCCGAGCCCCCTCCATCTCCGCCGCAAGCTCTCTTCCCCACCTCCCAAGCTT
GCCCTACCGGAAATCCACTCCTTCCGTGGCCCCTCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGACGATGGCGACGGCGATAGCGGCGGCCCCGATGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAGAAGGACTTCGACATCGAGTACGATCCTCTTGCCGCGGCGGCGGCGGCTGCAGCTGCGAGTTCCGACGGT
GTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACGCAGGGGTGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAGTTTCATAA
GATTAGTTTGTTGCACTGTGATTTCTTCATCAGGAAGCCGCCGGATCCGGACAATGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCAGACACTGATGTTTATG
CCATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCA
TTATACAAGTCCGAGAAAGAGGTTCTTAAGGTTTTCTTGACAAAGCACTTCAGAAATCGGAGGCTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAAT
TGATTCAAAAACCAAATCAATCACCAGAGCAAAAGTCTTGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGTGACTTACTTGTAGTTCGGGATAACGGGAACT
CATTCAAAATTATTCATTCGAGCGAACGAGATGATCCAACCACAGTGATAGAGAAGGAGGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGG
GACTTCAGCATTTCAAATTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCACCGTCTTCCTCCTCTCTTCGCCGTCGCCGCCGGCCACAATCCACCGCCTCCGAGCCCCCTCCATCTCCGCCGCAAGCTCTCTTCCCCACCTCCCAAGCTT
GCCCTACCGGAAATCCACTCCTTCCGTGGCCCCTCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGACGATGGCGACGGCGATAGCGGCGGCCCCGATGACT
ACGACATGGACGACGAGGAAATGGAGGAAGTCGACAACAAGAAGGACTTCGACATCGAGTACGATCCTCTTGCCGCGGCGGCGGCGGCTGCAGCTGCGAGTTCCGACGGT
GTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCGACGCAGGGGTGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAGTTTCATAA
GATTAGTTTGTTGCACTGTGATTTCTTCATCAGGAAGCCGCCGGATCCGGACAATGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCAGACACTGATGTTTATG
CCATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCA
TTATACAAGTCCGAGAAAGAGGTTCTTAAGGTTTTCTTGACAAAGCACTTCAGAAATCGGAGGCTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAAT
TGATTCAAAAACCAAATCAATCACCAGAGCAAAAGTCTTGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGTGACTTACTTGTAGTTCGGGATAACGGGAACT
CATTCAAAATTATTCATTCGAGCGAACGAGATGATCCAACCACAGTGATAGAGAAGGAGGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGG
GACTTCAGCATTTCAAATTGGTTTTAA
Protein sequenceShow/hide protein sequence
MNSTVFLLSSPSPPATIHRLRAPSISAASSLPHLPSLPYRKSTPSVAPLFVPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAASSDG
VGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDP
LYKSEKEVLKVFLTKHFRNRRLRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLR
DFSISNWF