; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037663 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037663
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr2:8107266..8110075
RNA-Seq ExpressionLag0037663
SyntenyLag0037663
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8597368.1 hypothetical protein GDO81_002266 [Engystomops pustulosus]4.4e-1032.29Show/hide
Query:  LGRPRNFPGPLFKRRGHPRGAYTLLGKSLWRPRNFPGPLFKHCGHPRGAYTLLGKSLGRPRNFPGPLFKHCGHPRGAYTLLGKSLGRPRNFPGPLFKRRG
        + R  +F GP   R GH        G S+ R R+FPGP                 S+ R R+FPGP                 S+ R R+FPGP   R G
Subjt:  LGRPRNFPGPLFKRRGHPRGAYTLLGKSLWRPRNFPGPLFKHCGHPRGAYTLLGKSLGRPRNFPGPLFKHCGHPRGAYTLLGKSLGRPRNFPGPLFKRRG

Query:  HPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTL
        H        G S+ R R+F GP   R GH       LG S+ R  +FPGP   R GH                 FPGP   R+GH  G   L
Subjt:  HPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTL

KAG9267222.1 hypothetical protein AMEX_G18039, partial [Astyanax mexicanus]5.7e-1031.02Show/hide
Query:  PRPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLWRPRNFPG----PLFKHCGHPRGAYTLLGKSLGRPRNFPGPLFKHCGHPR
        P PL K+ GHPR  Y     S       P PL K  GHPR           RP   P     P  KH GHPR   T    +    R  P PL KH   PR
Subjt:  PRPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLWRPRNFPG----PLFKHCGHPRGAYTLLGKSLGRPRNFPGPLFKHCGHPR

Query:  GAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNF
          Y             P PL K+ GHPR   T    +    R  P PL      P    T   +S   P     P  K  GHPR   T    +    R  
Subjt:  GAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNF

Query:  P------GPLFKRRGHPRGAYTLLGKKLGEAWEFLKPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPR
        P       P  K  GHPR              +   PL K  G PR   T+   +    R  P PL K  G PR
Subjt:  P------GPLFKRRGHPRGAYTLLGKKLGEAWEFLKPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPR

XP_015472393.2 basic proline-rich protein-like, partial [Parus major]2.8e-1736.1Show/hide
Query:  GNLGRLWDFPRPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLWRPRNFPGPLFKHCGHPRGAYTLLGKSLGRPRNFPGPLFKH
        G  G     P P  K  G P       G + G P   PGPL    G    A   LGK+   P    GPL    G P  A   LG   G P   PGP    
Subjt:  GNLGRLWDFPRPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLWRPRNFPGPLFKHCGHPRGAYTLLGKSLGRPRNFPGPLFKH

Query:  CGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLG
         G P  A  L G++   PR  PGPL K  G P       G   G P   PGPL K  G P      LGK+LG PR  PGPL K  G P     LLG   G
Subjt:  CGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLG

Query:  RPRNFPGPLFKRRGHPRGAYTLLGKKLGEAWEFLKPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYT
         P   PGPL    G        LG   G       PL    G P  A   LG + G P   PGP  +  G P G  T
Subjt:  RPRNFPGPLFKRRGHPRGAYTLLGKKLGEAWEFLKPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYT

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTGGTCGGCCTCGGGAAGAGGCCGAGCACATCAATCTCTCTCTTTAGCTTATCTGGTCGGCCTCGGCCTCGGGAAGAGGCCGAGCACAGCAGCTTCCCGTTTTG
GGTTATCTGGTCGGCCTTGGGAAAAGGCCGAGCACAGCAGCTAAACCCCTGTACTTGGTCATTCGGAACGCTTCATTCCAGATCCGGGGCTTTTGCAGCATCTCCCTGCG
GCTTTGGAGCTAGGATGCTCGGCCTCGGCCTTGGCATGAGGCTGAGCATTTCTTCTGCTTTGCTTGCTACTTTTCTCTGTTGTATCCATCCCGAGGGGGCGGAACTCGAC
CTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATAAGGACGACCAGCTCCTCTGTGTTGTTCGCTTGCTTGTTTTCCATTCCAAAGTTCATTCTTGAAGCTGAGGCAGC
CGGCCCTGACCTTGGCATGAGGTTGAGCCTCGCTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCAGATACCTGGTCTGCGAAGTGACTACCGGACTC
AGTCGAGCCCTATTCCTTGTCTAATGGTCGGCCTTAGCCTTGACATGAGGACGAGCGCTTTTCCTGCATGGTTTGAGAAGTTTGAGGGAAACTTGGGGAGGCTTTGGGAT
TTCCCAAGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCG
TGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCCTGTGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCATTGTGGTCATCCCAGGGGTGCGTACACTC
TTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCATTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCT
AGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAA
GCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGT
ACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGG
GAGGCCTGGGAATTTCTCAAGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCT
CTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCTCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGG
AGCATCTCCCTTTCGGCTTGAACCGCTTCGGCTACGATAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTGCGTACACTCCTCTGGGGAAAAGCTTTGGGAGGCCTGGGA
ATCTCCCGAGTCTCTCTGCAAGCGCTGTCAAAACTTTTGAAACAAAATTCAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTGGTCGGCCTCGGGAAGAGGCCGAGCACATCAATCTCTCTCTTTAGCTTATCTGGTCGGCCTCGGCCTCGGGAAGAGGCCGAGCACAGCAGCTTCCCGTTTTG
GGTTATCTGGTCGGCCTTGGGAAAAGGCCGAGCACAGCAGCTAAACCCCTGTACTTGGTCATTCGGAACGCTTCATTCCAGATCCGGGGCTTTTGCAGCATCTCCCTGCG
GCTTTGGAGCTAGGATGCTCGGCCTCGGCCTTGGCATGAGGCTGAGCATTTCTTCTGCTTTGCTTGCTACTTTTCTCTGTTGTATCCATCCCGAGGGGGCGGAACTCGAC
CTTGGCCTCTGGATGGTCGGCCTCGGCCTTGGCATAAGGACGACCAGCTCCTCTGTGTTGTTCGCTTGCTTGTTTTCCATTCCAAAGTTCATTCTTGAAGCTGAGGCAGC
CGGCCCTGACCTTGGCATGAGGTTGAGCCTCGCTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCAGATACCTGGTCTGCGAAGTGACTACCGGACTC
AGTCGAGCCCTATTCCTTGTCTAATGGTCGGCCTTAGCCTTGACATGAGGACGAGCGCTTTTCCTGCATGGTTTGAGAAGTTTGAGGGAAACTTGGGGAGGCTTTGGGAT
TTCCCAAGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCG
TGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCCTGTGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCATTGTGGTCATCCCAGGGGTGCGTACACTC
TTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCATTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCT
AGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAA
GCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGT
ACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGG
GAGGCCTGGGAATTTCTCAAGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCT
CTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCTCAAGCCTCTCTTCAAGCTGCATAGTCATCCCAGGG
AGCATCTCCCTTTCGGCTTGAACCGCTTCGGCTACGATAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTGCGTACACTCCTCTGGGGAAAAGCTTTGGGAGGCCTGGGA
ATCTCCCGAGTCTCTCTGCAAGCGCTGTCAAAACTTTTGAAACAAAATTCAGAGTAA
Protein sequenceShow/hide protein sequence
MALVGLGKRPSTSISLFSLSGRPRPREEAEHSSFPFWVIWSALGKGRAQQLNPCTWSFGTLHSRSGAFAASPCGFGARMLGLGLGMRLSISSALLATFLCCIHPEGAELD
LGLWMVGLGLGIRTTSSSVLFACLFSIPKFILEAEAAGPDLGMRLSLASPSLVCLPHSWTHVQIPGLRSDYRTQSSPIPCLMVGLSLDMRTSAFPAWFEKFEGNLGRLWD
FPRPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLWRPRNFPGPLFKHCGHPRGAYTLLGKSLGRPRNFPGPLFKHCGHPRGAYTLLGKSLGRP
RNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKKLG
EAWEFLKPLFKRCGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKKLGEAWEFLKPLFKLHSHPREHLPFGLNRFGYDNRSSVVVFPGVRTLLWGKALGGLG
ISRVSLQALSKLLKQNSE