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Lag0037695 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037695
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr2:8444837..8445223
RNA-Seq ExpressionLag0037695
SyntenyLag0037695
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049700.1 T4.5 [Cucumis melo var. makuwa]2.1e-1647.29Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS
        MRTRSQ VTF+ELH+LL+AE++A+ KQSK DD+  QP+ + +S + S LS    F  NF RG   G+             GR +F+ Q RG  SSP Q S
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS

Query:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF
              +CQIC    H+A+DCFNRMNY+F
Subjt:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF

KAG6588985.1 Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1550.39Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRG-RGFNPSGRGNFNQARGIFSSPTQSS
        MRTRS  VTF+ELH+LLKAE++A+ KQSK+DD   QP+A+ AS + S +S  S F+ NF RGR  GR R  G G   F+  GRG      G  S   Q  
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRG-RGFNPSGRGNFNQARGIFSSPTQSS

Query:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF
              SCQIC    H A+DCFNRMNY+F
Subjt:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]2.1e-1647.29Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS
        MRTRSQ VTF+ELH+LL+AE++A+ KQSK DD+  QP+ + +S + S LS    F  NF RG   G+             GR +F+ Q RG  SSP Q S
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS

Query:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF
              +CQIC    H+A+DCFNRMNY+F
Subjt:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]2.1e-1647.29Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS
        MRTRSQ VTF+ELH+LL+AE++A+ KQSK DD+  QP+ + +S + S LS    F  NF RG   G+             GR +F+ Q RG  SSP Q S
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS

Query:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF
              +CQIC    H+A+DCFNRMNY+F
Subjt:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF

XP_016900446.1 PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]2.1e-1647.29Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS
        MRTRSQ VTF+ELH+LL+AE++A+ KQSK DD+  QP+ + +S + S LS    F  NF RG   G+             GR +F+ Q RG  SSP Q S
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS

Query:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF
              +CQIC    H+A+DCFNRMNY+F
Subjt:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X21.0e-1647.29Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS
        MRTRSQ VTF+ELH+LL+AE++A+ KQSK DD+  QP+ + +S + S LS    F  NF RG   G+             GR +F+ Q RG  SSP Q S
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS

Query:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF
              +CQIC    H+A+DCFNRMNY+F
Subjt:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X31.0e-1647.29Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS
        MRTRSQ VTF+ELH+LL+AE++A+ KQSK DD+  QP+ + +S + S LS    F  NF RG   G+             GR +F+ Q RG  SSP Q S
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS

Query:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF
              +CQIC    H+A+DCFNRMNY+F
Subjt:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X11.0e-1647.29Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS
        MRTRSQ VTF+ELH+LL+AE++A+ KQSK DD+  QP+ + +S + S LS    F  NF RG   G+             GR +F+ Q RG  SSP Q S
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS

Query:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF
              +CQIC    H+A+DCFNRMNY+F
Subjt:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF

A0A5D3CLI6 T4.51.0e-1647.29Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS
        MRTRSQ VTF+ELH+LL+AE++A+ KQSK DD+  QP+ + +S + S LS    F  NF RG   G+             GR +F+ Q RG  SSP Q S
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFN-QARGIFSSPTQSS

Query:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF
              +CQIC    H+A+DCFNRMNY+F
Subjt:  DEQRRVSCQICQHSEHSAIDCFNRMNYHF

A0A6J1D9L6 uncharacterized protein LOC1110188924.2e-1544.36Show/hide
Query:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRG-----FNPSGRGNFNQARGIFSSP
        MRTR+QSV+F+ELH+ +K+E++AIEKQ K++D +TQP+A+FAS   S  SQ    + + N+    GR +N GRG+      F   GRG   ++ G F + 
Subjt:  MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRG-----FNPSGRGNFNQARGIFSSP

Query:  TQSSDEQRRVSCQICQHSEHSAIDCFNRMNYHF
         Q+ +   R  CQIC    H+A+DC+NRMN+HF
Subjt:  TQSSDEQRRVSCQICQHSEHSAIDCFNRMNYHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACACGGTCACAATCGGTTACATTCGATGAGCTCCACATCCTTCTAAAAGCAGAGGATGCTGCTATTGAGAAACAATCAAAGCAAGATGATGCCCTAACTCAGCC
TTCTGCCATGTTTGCGTCTCAAACAACGTCCAATCTCTCTCAGCGTTCCAAGTTCTCTGGAAATTTTAATCGAGGAAGGTCATCTGGTCGTAGACGCAATCAAGGTCGTG
GTCGTGGATTCAATCCTTCTGGTCGTGGAAATTTTAATCAAGCTAGAGGCATATTTTCTTCTCCTACACAGTCTTCTGACGAACAAAGACGGGTTTCATGTCAAATTTGT
CAACATTCTGAACATAGTGCGATTGATTGTTTTAACAGAATGAACTACCATTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAACACGGTCACAATCGGTTACATTCGATGAGCTCCACATCCTTCTAAAAGCAGAGGATGCTGCTATTGAGAAACAATCAAAGCAAGATGATGCCCTAACTCAGCC
TTCTGCCATGTTTGCGTCTCAAACAACGTCCAATCTCTCTCAGCGTTCCAAGTTCTCTGGAAATTTTAATCGAGGAAGGTCATCTGGTCGTAGACGCAATCAAGGTCGTG
GTCGTGGATTCAATCCTTCTGGTCGTGGAAATTTTAATCAAGCTAGAGGCATATTTTCTTCTCCTACACAGTCTTCTGACGAACAAAGACGGGTTTCATGTCAAATTTGT
CAACATTCTGAACATAGTGCGATTGATTGTTTTAACAGAATGAACTACCATTTCTAA
Protein sequenceShow/hide protein sequence
MRTRSQSVTFDELHILLKAEDAAIEKQSKQDDALTQPSAMFASQTTSNLSQRSKFSGNFNRGRSSGRRRNQGRGRGFNPSGRGNFNQARGIFSSPTQSSDEQRRVSCQIC
QHSEHSAIDCFNRMNYHF