; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037696 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037696
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr2:8445399..8446097
RNA-Seq ExpressionLag0037696
SyntenyLag0037696
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049700.1 T4.5 [Cucumis melo var. makuwa]3.0e-1458.51Show/hide
Query:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ
        + +ILKAHKL+GFIDG+  CPP+T  S    SSTST      PP     Q NP      YE+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Subjt:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ

KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]6.6e-1454.26Show/hide
Query:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ
        + +ILKAHKLFGF+DG+  CP            TS  T +  PP     Q NP     LYE+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Subjt:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]3.0e-1458.51Show/hide
Query:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ
        + +ILKAHKL+GFIDG+  CPP+T  S    SSTST      PP     Q NP      YE+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Subjt:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]3.0e-1458.51Show/hide
Query:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ
        + +ILKAHKL+GFIDG+  CPP+T  S    SSTST      PP     Q NP      YE+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Subjt:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ

XP_016900446.1 PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]3.0e-1458.51Show/hide
Query:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ
        + +ILKAHKL+GFIDG+  CPP+T  S    SSTST      PP     Q NP      YE+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Subjt:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X21.4e-1458.51Show/hide
Query:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ
        + +ILKAHKL+GFIDG+  CPP+T  S    SSTST      PP     Q NP      YE+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Subjt:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X31.4e-1458.51Show/hide
Query:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ
        + +ILKAHKL+GFIDG+  CPP+T  S    SSTST      PP     Q NP      YE+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Subjt:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X11.4e-1458.51Show/hide
Query:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ
        + +ILKAHKL+GFIDG+  CPP+T  S    SSTST      PP     Q NP      YE+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Subjt:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ

A0A5D3CLI6 T4.51.4e-1458.51Show/hide
Query:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ
        + +ILKAHKL+GFIDG+  CPP+T  S    SSTST      PP     Q NP      YE+W+AKD+ALMT+INATLSP AL YVVG TSSKQ
Subjt:  ILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQ

A0A5D3D3T6 Retrotran_gag_3 domain-containing protein1.0e-1251.55Show/hide
Query:  ILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQAVRFLK
        +LKAHKL+GFID S   PPKT+ + T  SS++T   T +    +S   NP      YE+W AKD+A M LINATLS  ALTYVVGC SS Q  + L+
Subjt:  ILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQAVRFLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAACATTTTGTCGATCTTAAAGGCTCACAAGTTGTTTGGATTTATCGATGGCTCCACTAATTGCCCTCCAAAGACGGTTCCATCATCCACCATATTGTCCTCTAC
ATCGACGGAGACTGCAACTGAAGCACCTCCTGCTCCAGTATCTTCTCAGATTAATCCACTTTATGAGGAGTTACTTTATGAGGAGTGGGTTGCTAAAGATGAAGCTCTAA
TGACACTGATCAATGCCACTCTGTCGCCGGCAGCCTTAACCTATGTTGTTGGTTGCACATCATCCAAACAAGCCGTGAGGTTCTTGAAAAGCACTACTCTTCGAGCTCAA
GAACCAACATCGTCAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAACATTTTGTCGATCTTAAAGGCTCACAAGTTGTTTGGATTTATCGATGGCTCCACTAATTGCCCTCCAAAGACGGTTCCATCATCCACCATATTGTCCTCTAC
ATCGACGGAGACTGCAACTGAAGCACCTCCTGCTCCAGTATCTTCTCAGATTAATCCACTTTATGAGGAGTTACTTTATGAGGAGTGGGTTGCTAAAGATGAAGCTCTAA
TGACACTGATCAATGCCACTCTGTCGCCGGCAGCCTTAACCTATGTTGTTGGTTGCACATCATCCAAACAAGCCGTGAGGTTCTTGAAAAGCACTACTCTTCGAGCTCAA
GAACCAACATCGTCAATTTGA
Protein sequenceShow/hide protein sequence
MSNILSILKAHKLFGFIDGSTNCPPKTVPSSTILSSTSTETATEAPPAPVSSQINPLYEELLYEEWVAKDEALMTLINATLSPAALTYVVGCTSSKQAVRFLKSTTLRAQ
EPTSSI