; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037699 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037699
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L27
Genome locationchr2:8470527..8470934
RNA-Seq ExpressionLag0037699
SyntenyLag0037699
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001141 - Ribosomal protein L27e
IPR005824 - KOW
IPR008991 - Translation protein SH3-like domain superfamily
IPR018262 - Ribosomal protein L27e, conserved site
IPR038655 - Ribosomal protein L27e superfamily
IPR041991 - Eukaryotic Ribosomal Protein L27, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143316.1 60S ribosomal protein L27-like [Momordica charantia]2.3e-6695.56Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGI KYPS+VIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKG+KVAAAKEIKKR+E+RFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

XP_022940098.1 60S ribosomal protein L27-3-like [Cucurbita moschata]1.8e-6697.04Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK SKVAA+KEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

XP_022981139.1 60S ribosomal protein L27-like [Cucurbita maxima]2.1e-6797.78Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

XP_023523697.1 60S ribosomal protein L27-like [Cucurbita pepo subsp. pepo]6.0e-6797.04Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKGSKV AAKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

XP_038899503.1 60S ribosomal protein L27-3-like [Benincasa hispida]3.9e-6696.3Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYG+CLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKGSKVAA+KEIKKR EDRFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

TrEMBL top hitse value%identityAlignment
A0A1S3CNL3 60S ribosomal protein L276.1e-6594.81Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAG+KKYPSKVIRKDS KKT KKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK SKVAA+KEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

A0A5A7SSA5 60S ribosomal protein L276.1e-6594.81Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAG+KKYPSKVIRKDS KKT KKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK SKVAA+KEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

A0A6J1CPX4 60S ribosomal protein L271.1e-6695.56Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGI KYPS+VIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKG+KVAAAKEIKKR+E+RFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

A0A6J1FNC2 60S ribosomal protein L278.5e-6797.04Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK SKVAA+KEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

A0A6J1J143 60S ribosomal protein L271.0e-6797.78Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+KKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

SwissProt top hitse value%identityAlignment
P41101 60S ribosomal protein L272.0e-5275.54Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDL----KDVVN
        M KF+KPNKAVI+LQG++AGRKAVIVR FD+GTRDRPYGHCLVAGI +YP KVIRKDS KK  KKSRVKAFIKLVNY H+MPTRYTLD DL    KDVVN
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDL----KDVVN

Query:  VDCLQSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
         D LQ++  KV  A+  K RL +RFKTGKNRWFFTKLRF
Subjt:  VDCLQSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

P51419 60S ribosomal protein L27-32.8e-5982.22Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK  KVAA KE K +LE+RFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

Q05462 60S ribosomal protein L272.8e-5982.96Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+KPNKAVI+LQGR+AG+KAVIV+ FDDGTR++PYGHCLVAGIKK+PSKVI+KDS KKTAKKSRVKAF+KLVNYQHLMPTRYTLDVDLKD V  D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK  KV A KE KK LE+RFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

Q8LCL3 60S ribosomal protein L27-23.4e-5780Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDGT DR YGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        +SK  KV A KE K +LE+RFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

Q9SKX8 60S ribosomal protein L27-15.1e-5373.33Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVK +KP KAVI+LQGR+ G+KAVIV++FDDGT ++ YGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D +
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
         SK  KV A KE K + E+RFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

Arabidopsis top hitse value%identityAlignment
AT2G32220.1 Ribosomal L27e protein family3.7e-5473.33Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVK +KP KAVI+LQGR+ G+KAVIV++FDDGT ++ YGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D +
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
         SK  KV A KE K + E+RFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

AT3G22230.1 Ribosomal L27e protein family2.4e-5880Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDGT DR YGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        +SK  KV A KE K +LE+RFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

AT4G15000.1 Ribosomal L27e protein family2.0e-6082.22Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK  KVAA KE K +LE+RFKTGKNRWFFTKLRF
Subjt:  QSKGSKVAAAKEIKKRLEDRFKTGKNRWFFTKLRF

AT4G15000.2 Ribosomal L27e protein family9.0e-5380.49Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+KKYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGSKVAAAKEIKKRLEDRFKT
        QSK  KVAA KE K +LE+RFKT
Subjt:  QSKGSKVAAAKEIKKRLEDRFKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAATTTATCAAGCCGAACAAGGCAGTTATTGTTCTGCAAGGCCGATTCGCCGGCCGAAAGGCTGTGATCGTCCGCAACTTCGATGACGGAACCCGCGATCGCCC
CTACGGCCATTGTTTGGTTGCAGGGATCAAAAAGTACCCGAGCAAGGTCATTCGCAAGGATTCAACGAAGAAGACGGCGAAGAAATCGAGAGTGAAGGCCTTCATCAAAC
TTGTGAACTACCAGCACCTCATGCCGACAAGGTACACGCTCGACGTCGATCTCAAGGATGTGGTTAATGTGGATTGTTTGCAGTCGAAGGGATCAAAGGTCGCAGCCGCA
AAGGAAATCAAGAAGAGGTTGGAGGACAGGTTTAAGACTGGGAAGAACAGGTGGTTTTTTACCAAGCTTAGGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAATTTATCAAGCCGAACAAGGCAGTTATTGTTCTGCAAGGCCGATTCGCCGGCCGAAAGGCTGTGATCGTCCGCAACTTCGATGACGGAACCCGCGATCGCCC
CTACGGCCATTGTTTGGTTGCAGGGATCAAAAAGTACCCGAGCAAGGTCATTCGCAAGGATTCAACGAAGAAGACGGCGAAGAAATCGAGAGTGAAGGCCTTCATCAAAC
TTGTGAACTACCAGCACCTCATGCCGACAAGGTACACGCTCGACGTCGATCTCAAGGATGTGGTTAATGTGGATTGTTTGCAGTCGAAGGGATCAAAGGTCGCAGCCGCA
AAGGAAATCAAGAAGAGGTTGGAGGACAGGTTTAAGACTGGGAAGAACAGGTGGTTTTTTACCAAGCTTAGGTTCTGA
Protein sequenceShow/hide protein sequence
MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGIKKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGSKVAAA
KEIKKRLEDRFKTGKNRWFFTKLRF