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Lag0037702 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037702
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:8491584..8494103
RNA-Seq ExpressionLag0037702
SyntenyLag0037702
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RYR04437.1 hypothetical protein Ahy_B06g084164 [Arachis hypogaea]2.1e-2237.11Show/hide
Query:  RQLLVYRGDH--RVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKI
        R L  YR DH   +I+   QE++   +  +I   FRFEE W  +++C   I K W       S  +L  ++++   +L++WG+   G+   +I E +  I
Subjt:  RQLLVYRGDH--RVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKI

Query:  EALNEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDIERFSFIIILNF
        E L       +    LK  ++ LD++L +EEI W QRSR  WLK GD+NT++FH KA  R ++N+I++ITD AG  FE+ E IE     II+NF
Subjt:  EALNEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDIERFSFIIILNF

XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber]2.7e-2239.62Show/hide
Query:  RSIKTHFRFEEAWTLHEDCVSTIQKGWD-KGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEALNEGRL---EGNAQTFLKMEEKRLD
        +  K  F+FEEAW + EDC   +++ WD  G G+   N++  +I+   EEL+ WG +K+   +  I   + ++E LN   +   E NA+ +L +  K+LD
Subjt:  RSIKTHFRFEEAWTLHEDCVSTIQKGWD-KGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEALNEGRL---EGNAQTFLKMEEKRLD

Query:  NILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDI
        ++L+++EIYW QRSR  WLK GD+NT++FHSKA+ RR++N I+ I  + G++ E  E+I
Subjt:  NILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDI

XP_023915655.1 uncharacterized protein LOC112027215 [Quercus suber]8.4e-2437.89Show/hide
Query:  RFLPDCPRQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSP-NNLLTRIQSVSEELKRWGRNKTGKFKTRIT
        RF       L  +  DHR +  VLQ   +  + R     F+FEE+W L EDC  TI + W    GD++  N    +I    E+L  WG  KT      I 
Subjt:  RFLPDCPRQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSP-NNLLTRIQSVSEELKRWGRNKTGKFKTRIT

Query:  ETKRKIEALN-EGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDI
        + ++KIE L+ E   + N+ + L+   K+LD++L+++EIYW Q+S+  WLK GD+NT++FHSKA+ RR++N IQ + D   ++ E  EDI
Subjt:  ETKRKIEALN-EGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDI

XP_030487129.1 uncharacterized protein LOC115704047 [Cannabis sativa]1.6e-2239.88Show/hide
Query:  RQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEA
        + L  Y  DHRV+ A + +S +    R  K+ FRFE+ W   +DC+  I K W+     D     L  I S +  L+ W R+K G    +I  +  K+EA
Subjt:  RQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEA

Query:  L-NEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAG
        L N    + +  + L   EK LD++L +EE YW QRSR  WLK GD NT++FH KA+ R+  NKI K+TDS G
Subjt:  L-NEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAG

XP_030968337.1 uncharacterized protein LOC115988853 [Quercus lobata]1.4e-2342.26Show/hide
Query:  VLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSP-NNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEALNEGR-LEGNAQTF
        +LQ     H        F+FEEAW L EDC + +Q+GW+K  G  S    +  +I+    EL  WG +KT     +I   +RKIE LN G  +E N   F
Subjt:  VLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSP-NNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEALNEGR-LEGNAQTF

Query:  LKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDI
        L +  K LD++L+++EIYW QRSR  WLK GD+NT++FHSK + RR++N IQ I + A  + E  E+I
Subjt:  LKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDI

TrEMBL top hitse value%identityAlignment
A0A2N9ETE5 Reverse transcriptase domain-containing protein1.1e-2128.7Show/hide
Query:  ETERARPRPMAEAEQGVGPKTRPLRSWPVSLAGFAPLVHLSARFLPDCPRQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQK
        E +  RPRP  + +     + RP +    S   +   + L  +F       L V   DH+ +   L+     H    ++  FRFEE WT    C +TIQ 
Subjt:  ETERARPRPMAEAEQGVGPKTRPLRSWPVSLAGFAPLVHLSARFLPDCPRQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQK

Query:  GWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEALNEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWF
         WDK R   +   +  +++     L RW R   G    ++ E ++++       ++G +   +K+ +  ++ +L +EE  W+QRSR  WLK GDRNTR+F
Subjt:  GWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEALNEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWF

Query:  HSKATHRRQKNKIQKITDSAGHYFENREDI
        H  A+ RR++N+I  + ++ G + E +E++
Subjt:  HSKATHRRQKNKIQKITDSAGHYFENREDI

A0A444YR87 Reverse transcriptase domain-containing protein1.0e-2237.11Show/hide
Query:  RQLLVYRGDH--RVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKI
        R L  YR DH   +I+   QE++   +  +I   FRFEE W  +++C   I K W       S  +L  ++++   +L++WG+   G+   +I E +  I
Subjt:  RQLLVYRGDH--RVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKI

Query:  EALNEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDIERFSFIIILNF
        E L       +    LK  ++ LD++L +EEI W QRSR  WLK GD+NT++FH KA  R ++N+I++ITD AG  FE+ E IE     II+NF
Subjt:  EALNEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDIERFSFIIILNF

A0A803NMB3 Uncharacterized protein8.4e-2235.03Show/hide
Query:  YRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEALNE-G
        Y  DHR I   +            ++ FRFE+ W    +C   I + W++    D    LL+ + S +  L++W R+K G  K  I ET+ ++  LN   
Subjt:  YRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEALNE-G

Query:  RLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDI
                 LK  E  LD++L +EEIYW+QRSR DWL  GDRNT++FH+KA+ R+  NKI+ + + AG     + D+
Subjt:  RLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDI

A0A803PJK4 Uncharacterized protein4.9e-2239.88Show/hide
Query:  RQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEA
        + L  Y  DHRV+ A + +S +    R  K+ FRFE+ W   +DC+  I K W+     D     L  I S +  L+ W R+K G    +I  +  K+EA
Subjt:  RQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEA

Query:  L-NEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAG
        L N    + +  + L   EK LD++L +EE YW QRSR  WLK GD NT++FH KA+ R+  NKI K+TDS G
Subjt:  L-NEGRLEGNAQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAG

A0A803Q8W7 Uncharacterized protein1.3e-2536.67Show/hide
Query:  RQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEA
        + L  Y  DHRVI   + E+   H     +T FRFE+ W   E+    IQ+ W      D+    L  I S ++ L++W R+K G FK +I++ ++K+  
Subjt:  RQLLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEA

Query:  LNEGRLEGN-AQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENRE
        LN   +  + A   LK +E  LD +L +EE YW+QRSR DW++ GD+NT++FH+ A+ RRQ N I+ +TD  G    +++
Subjt:  LNEGRLEGN-AQTFLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAGGAAGACGTGGCCTGCAAGACGGTAAACCTGCACACCGGTGTGGTGCTCGTCACACTAGCTCCGATGCCTAAGTCAGCAAACAAAACGGTAGGGAGTGGAAA
AGGTTTCGGAGGCGTTTTAGGTCAAACCAGGCGAAACCGGGGCATCCAGAGGCGATGGGGACCAGACGAGACTGAACGGGCTCGGCCTCGGCCCATGGCCGAGGCCGAGC
AGGGGGTCGGGCCTAAAACCCGACCCCTTCGGTCTTGGCCCGTCTCACTTGCCGGTTTTGCCCCATTGGTCCATCTTTCAGCCCGATTCCTCCCCGATTGTCCTCGTCAG
CTCCTTGTATATCGGGGTGATCATAGAGTCATTGAAGCTGTTCTACAAGAATCAGAAGACCATCATCATGATAGATCCATAAAAACCCATTTCAGATTTGAAGAAGCCTG
GACCCTCCACGAGGACTGCGTTTCAACAATCCAGAAAGGGTGGGATAAAGGTAGAGGTGATGATTCGCCCAACAATTTACTCACCCGCATTCAAAGTGTCTCAGAGGAAC
TAAAGCGGTGGGGAAGGAACAAAACAGGAAAATTCAAAACAAGAATCACGGAGACCAAGAGGAAAATTGAGGCATTGAATGAGGGTCGTCTGGAAGGAAATGCACAAACC
TTTTTAAAAATGGAAGAGAAAAGATTGGATAACATCCTGATGGAGGAAGAAATTTACTGGAAACAACGCTCACGAGAAGATTGGCTCAAATGGGGCGATCGAAACACGCG
ATGGTTCCACTCTAAAGCCACTCATCGGAGGCAGAAGAACAAAATCCAGAAAATAACCGACTCAGCTGGCCACTATTTTGAAAATAGGGAAGATATTGAGCGATTTTCCT
TCATTATTATTCTGAACTTTTTAAATCTTCTACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAGGAAGACGTGGCCTGCAAGACGGTAAACCTGCACACCGGTGTGGTGCTCGTCACACTAGCTCCGATGCCTAAGTCAGCAAACAAAACGGTAGGGAGTGGAAA
AGGTTTCGGAGGCGTTTTAGGTCAAACCAGGCGAAACCGGGGCATCCAGAGGCGATGGGGACCAGACGAGACTGAACGGGCTCGGCCTCGGCCCATGGCCGAGGCCGAGC
AGGGGGTCGGGCCTAAAACCCGACCCCTTCGGTCTTGGCCCGTCTCACTTGCCGGTTTTGCCCCATTGGTCCATCTTTCAGCCCGATTCCTCCCCGATTGTCCTCGTCAG
CTCCTTGTATATCGGGGTGATCATAGAGTCATTGAAGCTGTTCTACAAGAATCAGAAGACCATCATCATGATAGATCCATAAAAACCCATTTCAGATTTGAAGAAGCCTG
GACCCTCCACGAGGACTGCGTTTCAACAATCCAGAAAGGGTGGGATAAAGGTAGAGGTGATGATTCGCCCAACAATTTACTCACCCGCATTCAAAGTGTCTCAGAGGAAC
TAAAGCGGTGGGGAAGGAACAAAACAGGAAAATTCAAAACAAGAATCACGGAGACCAAGAGGAAAATTGAGGCATTGAATGAGGGTCGTCTGGAAGGAAATGCACAAACC
TTTTTAAAAATGGAAGAGAAAAGATTGGATAACATCCTGATGGAGGAAGAAATTTACTGGAAACAACGCTCACGAGAAGATTGGCTCAAATGGGGCGATCGAAACACGCG
ATGGTTCCACTCTAAAGCCACTCATCGGAGGCAGAAGAACAAAATCCAGAAAATAACCGACTCAGCTGGCCACTATTTTGAAAATAGGGAAGATATTGAGCGATTTTCCT
TCATTATTATTCTGAACTTTTTAAATCTTCTACTTTAA
Protein sequenceShow/hide protein sequence
MREEDVACKTVNLHTGVVLVTLAPMPKSANKTVGSGKGFGGVLGQTRRNRGIQRRWGPDETERARPRPMAEAEQGVGPKTRPLRSWPVSLAGFAPLVHLSARFLPDCPRQ
LLVYRGDHRVIEAVLQESEDHHHDRSIKTHFRFEEAWTLHEDCVSTIQKGWDKGRGDDSPNNLLTRIQSVSEELKRWGRNKTGKFKTRITETKRKIEALNEGRLEGNAQT
FLKMEEKRLDNILMEEEIYWKQRSREDWLKWGDRNTRWFHSKATHRRQKNKIQKITDSAGHYFENREDIERFSFIIILNFLNLLL