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Lag0037707 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037707
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:8539602..8540012
RNA-Seq ExpressionLag0037707
SyntenyLag0037707
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG62563.1 hypothetical protein EZV62_009557 [Acer yangbiense]9.2e-0735.63Show/hide
Query:  LTIAERSKVSGMDDDELNRKIQDLENIAVC---KILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGG
        L+I E+   + + D +L  K +  + +A+C   K+LT K +N E FK+++ +IWH+ G V I+ + +N+FEC F +L+ ++R++ GG
Subjt:  LTIAERSKVSGMDDDELNRKIQDLENIAVC---KILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGG

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]2.1e-1134.55Show/hide
Query:  MEEATIHRQMEKLNLTIAERSKVSGMDDDELNRKIQDLENIAVCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGGHG
        M +  + RQ+E+L LT  E+ ++  M +DE+    +  +   VCK+LT K +  E+FKNM+P+IW +   V I+ VG+N+F C F +++DK +++  G  
Subjt:  MEEATIHRQMEKLNLTIAERSKVSGMDDDELNRKIQDLENIAVCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGGHG

Query:  FMTEPSLFLK
        F  +  + L+
Subjt:  FMTEPSLFLK

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]3.7e-0832.2Show/hide
Query:  MEEATIHRQMEKLNLTIAERSKVSGMDDDEL----NRKIQDLENIA----VCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKR
        M +  + + +E+L LT  E+ ++  M + E+      +I+D +  A    VCK+LT K +  E+FKNM+P+IW     V I+ VG+N+F C F +++DK 
Subjt:  MEEATIHRQMEKLNLTIAERSKVSGMDDDEL----NRKIQDLENIA----VCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKR

Query:  RVIEGGHGFMTEPSLFLK
        +++  G  F  +  + L+
Subjt:  RVIEGGHGFMTEPSLFLK

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]3.7e-0832.2Show/hide
Query:  MEEATIHRQMEKLNLTIAERSKVSGMDDDEL----NRKIQDLENIA----VCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKR
        M +  + + +E+L LT  E+ ++  M + E+      +I+D +  A    VCK+LT K +  E+FKNM+P+IW     V I+ VG+N+F C F +++DK 
Subjt:  MEEATIHRQMEKLNLTIAERSKVSGMDDDEL----NRKIQDLENIA----VCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKR

Query:  RVIEGGHGFMTEPSLFLK
        +++  G  F  +  + L+
Subjt:  RVIEGGHGFMTEPSLFLK

XP_042983316.1 uncharacterized protein LOC122312712 [Carya illinoinensis]1.3e-0531.96Show/hide
Query:  MEEATIHRQMEKLNLTIAERSKVSGMDDDELNRKIQDLENIAVCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEG
        M E  + +  E LNL   E   V  +D D L    + + N  + K++TE+  N E F++ +P++W +EG V   ++GE+ F   F    DK ++I+G
Subjt:  MEEATIHRQMEKLNLTIAERSKVSGMDDDELNRKIQDLENIAVCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEG

TrEMBL top hitse value%identityAlignment
A0A5C7HVP8 Uncharacterized protein8.4e-0638.37Show/hide
Query:  NLTIA-ERSKVSGMDDDELNRKIQDLENIAVCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGG
        NL+I  E SK+  + +D     ++D+E+  V K+L+ K +N E FK++I ++W   G V I+ VGEN+F   FN+L+D+ R+ + G
Subjt:  NLTIA-ERSKVSGMDDDELNRKIQDLENIAVCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGG

A0A5C7HZD3 CCHC-type domain-containing protein4.5e-0735.63Show/hide
Query:  LTIAERSKVSGMDDDELNRKIQDLENIAVC---KILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGG
        L+I E+   + + D +L  K +  + +A+C   K+LT K +N E FK+++ +IWH+ G V I+ + +N+FEC F +L+ ++R++ GG
Subjt:  LTIAERSKVSGMDDDELNRKIQDLENIAVC---KILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGG

A0A6J1CQJ5 uncharacterized protein LOC1110134131.0e-1134.55Show/hide
Query:  MEEATIHRQMEKLNLTIAERSKVSGMDDDELNRKIQDLENIAVCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGGHG
        M +  + RQ+E+L LT  E+ ++  M +DE+    +  +   VCK+LT K +  E+FKNM+P+IW +   V I+ VG+N+F C F +++DK +++  G  
Subjt:  MEEATIHRQMEKLNLTIAERSKVSGMDDDELNRKIQDLENIAVCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKRRVIEGGHG

Query:  FMTEPSLFLK
        F  +  + L+
Subjt:  FMTEPSLFLK

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X11.8e-0832.2Show/hide
Query:  MEEATIHRQMEKLNLTIAERSKVSGMDDDEL----NRKIQDLENIA----VCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKR
        M +  + + +E+L LT  E+ ++  M + E+      +I+D +  A    VCK+LT K +  E+FKNM+P+IW     V I+ VG+N+F C F +++DK 
Subjt:  MEEATIHRQMEKLNLTIAERSKVSGMDDDEL----NRKIQDLENIA----VCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKR

Query:  RVIEGGHGFMTEPSLFLK
        +++  G  F  +  + L+
Subjt:  RVIEGGHGFMTEPSLFLK

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X21.8e-0832.2Show/hide
Query:  MEEATIHRQMEKLNLTIAERSKVSGMDDDEL----NRKIQDLENIA----VCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKR
        M +  + + +E+L LT  E+ ++  M + E+      +I+D +  A    VCK+LT K +  E+FKNM+P+IW     V I+ VG+N+F C F +++DK 
Subjt:  MEEATIHRQMEKLNLTIAERSKVSGMDDDEL----NRKIQDLENIA----VCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAFNSLKDKR

Query:  RVIEGGHGFMTEPSLFLK
        +++  G  F  +  + L+
Subjt:  RVIEGGHGFMTEPSLFLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAACAGGAGCGAGTCATGGGAGATGCTCAGACATCTAAAGCAGGGGAGGAAACAGACGGAACAGCCTCCATGGAAGAGGCAACAATACACAGACAGATGGAAAA
ACTAAATTTGACAATAGCAGAACGGAGCAAAGTTTCAGGGATGGACGACGATGAGCTGAACAGGAAGATCCAAGACCTCGAAAACATAGCCGTTTGCAAAATCTTAACAG
AAAAGTACATGAACCCGGAAATCTTCAAGAATATGATACCCAAGATCTGGCACATGGAAGGAAGAGTGGGTATAAAAAAGGTGGGTGAAAATATGTTTGAGTGCGCTTTC
AACTCTTTGAAGGACAAAAGAAGAGTAATAGAGGGGGGCCATGGCTTTATGACAGAGCCCTCCTTGTTTTTGAAGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAACAGGAGCGAGTCATGGGAGATGCTCAGACATCTAAAGCAGGGGAGGAAACAGACGGAACAGCCTCCATGGAAGAGGCAACAATACACAGACAGATGGAAAA
ACTAAATTTGACAATAGCAGAACGGAGCAAAGTTTCAGGGATGGACGACGATGAGCTGAACAGGAAGATCCAAGACCTCGAAAACATAGCCGTTTGCAAAATCTTAACAG
AAAAGTACATGAACCCGGAAATCTTCAAGAATATGATACCCAAGATCTGGCACATGGAAGGAAGAGTGGGTATAAAAAAGGTGGGTGAAAATATGTTTGAGTGCGCTTTC
AACTCTTTGAAGGACAAAAGAAGAGTAATAGAGGGGGGCCATGGCTTTATGACAGAGCCCTCCTTGTTTTTGAAGAGATAA
Protein sequenceShow/hide protein sequence
MDKQERVMGDAQTSKAGEETDGTASMEEATIHRQMEKLNLTIAERSKVSGMDDDELNRKIQDLENIAVCKILTEKYMNPEIFKNMIPKIWHMEGRVGIKKVGENMFECAF
NSLKDKRRVIEGGHGFMTEPSLFLKR