; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037749 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037749
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L18a-like protein
Genome locationchr2:8784893..8787021
RNA-Seq ExpressionLag0037749
SyntenyLag0037749
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146004.1 60S ribosomal protein L18a-like protein [Cucumis sativus]1.1e-6984.97Show/hide
Query:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG
        MS+++KSAAVGVVVHHHHESNS HPHYGTFQGVANYPPVGF  PTR PG  DS DPSQ Q YAHGYQAVPGYAIVEGRP+RE RLPCCGIG GWFLFIIG
Subjt:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG

Query:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        F    IPWY GAILI+CGRVDYREKPGYVACSIAAVIATVAI+FGAT+EADVW
Subjt:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

XP_008452440.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]7.1e-7287.58Show/hide
Query:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG
        MSQE+KSAAVGVVVHHHHESNS HPHYGTFQGVANYPPV FPQPTRPPG SDS DPSQ Q YAHGYQAVPGYAIVEGRP+RE  LPCCGIG GWFLFIIG
Subjt:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG

Query:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        F    IPWY GAILILCGRVDYREKPGYVACSIAAVIAT+AI+FGAT+EADVW
Subjt:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

XP_022135554.1 60S ribosomal protein L18a-like protein [Momordica charantia]9.2e-7285.06Show/hide
Query:  MSQEEK-SAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFII
        MSQEEK +AA GVVVHHHHESNSGHP YGTFQGVANYPPVGFPQP RPPGASDSYDPSQSQPYAH YQAVPGYAIVEGRP+RERRLPCCGIG GWFLFII
Subjt:  MSQEEK-SAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFII

Query:  GFVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        GF  VGIPWY GAI+ILCGRVDYREKPGYVAC+IAA++ T+A++ G TK  DVW
Subjt:  GFVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

XP_023536200.1 60S ribosomal protein L18a-like protein [Cucurbita pepo subsp. pepo]4.0e-6784.31Show/hide
Query:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG
        MSQE+KSAAVGVVVHHHHE N GHPHYGTFQGVANYPPVGFPQPTRPPG SD  D SQ Q YAHGYQ V GYAIVEGRP+RE RLPCCGIG GWFLFIIG
Subjt:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG

Query:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        F+ +   WY+GAILILCGRV YREKPGYVACSIAAVIATVAI+FGATK ADVW
Subjt:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

XP_038896754.1 60S ribosomal protein L18a-like protein [Benincasa hispida]3.2e-7287.58Show/hide
Query:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG
        MSQE+KSAAVGVVVHHHHESNSGHP YGTFQGVANYPPVGFPQPTRPPG SDS DPSQ Q YAHGYQAVPGY IVEGRP+RERRLPCCGIG GWFLFIIG
Subjt:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG

Query:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        F    IPWY GAILILCGRVDYREKPGYVAC IAAV+ATVAI+FGAT+EAD W
Subjt:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

TrEMBL top hitse value%identityAlignment
A0A0A0L1Y0 Uncharacterized protein5.4e-7084.97Show/hide
Query:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG
        MS+++KSAAVGVVVHHHHESNS HPHYGTFQGVANYPPVGF  PTR PG  DS DPSQ Q YAHGYQAVPGYAIVEGRP+RE RLPCCGIG GWFLFIIG
Subjt:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG

Query:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        F    IPWY GAILI+CGRVDYREKPGYVACSIAAVIATVAI+FGAT+EADVW
Subjt:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

A0A1S3BUZ1 60S ribosomal protein L18a-like protein3.4e-7287.58Show/hide
Query:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG
        MSQE+KSAAVGVVVHHHHESNS HPHYGTFQGVANYPPV FPQPTRPPG SDS DPSQ Q YAHGYQAVPGYAIVEGRP+RE  LPCCGIG GWFLFIIG
Subjt:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG

Query:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        F    IPWY GAILILCGRVDYREKPGYVACSIAAVIAT+AI+FGAT+EADVW
Subjt:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

A0A5D3D9U1 60S ribosomal protein L18a-like protein3.4e-7287.58Show/hide
Query:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG
        MSQE+KSAAVGVVVHHHHESNS HPHYGTFQGVANYPPV FPQPTRPPG SDS DPSQ Q YAHGYQAVPGYAIVEGRP+RE  LPCCGIG GWFLFIIG
Subjt:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG

Query:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        F    IPWY GAILILCGRVDYREKPGYVACSIAAVIAT+AI+FGAT+EADVW
Subjt:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

A0A6J1C1R6 60S ribosomal protein L18a-like protein4.5e-7285.06Show/hide
Query:  MSQEEK-SAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFII
        MSQEEK +AA GVVVHHHHESNSGHP YGTFQGVANYPPVGFPQP RPPGASDSYDPSQSQPYAH YQAVPGYAIVEGRP+RERRLPCCGIG GWFLFII
Subjt:  MSQEEK-SAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFII

Query:  GFVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        GF  VGIPWY GAI+ILCGRVDYREKPGYVAC+IAA++ T+A++ G TK  DVW
Subjt:  GFVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

A0A6J1INF5 60S ribosomal protein L18a-like protein2.5e-6784.31Show/hide
Query:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG
        MSQE+KSAAVGVVVHHHHE N GHPHYGTFQGVANYPPVGFPQPTRPPG SD  D SQ Q YAHGYQ V GYAIVEGRP+RE RLPCCGIG GWFLFIIG
Subjt:  MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIG

Query:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        F+ +   WY+GAILILCGRV YREKPGYVACSIAAVIATVAI+FGATK ADVW
Subjt:  FVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein3.7e-3151.06Show/hide
Query:  HYGTFQGVANY----PPVGFPQPTRP----PGASDSYDPSQSQ----PYAHGYQ-AVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYVGA
        +YGTFQGVAN+    PP  F QP  P    PG   +Y   Q       YA G+   VP Y +VE RPM E  LPCCG+G GWFLFI+GF+F GIPWY+GA
Subjt:  HYGTFQGVANY----PPVGFPQPTRP----PGASDSYDPSQSQ----PYAHGYQ-AVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYVGA

Query:  ILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
         ++L   VD+REK GYVACSIA+V+  +A++ G T + ++W
Subjt:  ILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family5.6e-4357.64Show/hide
Query:  ESNSGHPHYGTFQGVANYPP-------VGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGY-AIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYV
        E  + H  YGTFQGV+NYPP        GFPQP+ PPG  DS  P     YAHGYQ VP +  + EGRP+R+RRLPCCGIG GWFLFI+GF    IPWYV
Subjt:  ESNSGHPHYGTFQGVANYPP-------VGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGY-AIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYV

Query:  GAILILCG-RVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        G  +++ G R+DYREKPGY+AC+IAA++AT+A++ G +K AD W
Subjt:  GAILILCG-RVDYREKPGYVACSIAAVIATVAILFGATKEADVW

AT1G29970.1 60S ribosomal protein L18A-12.6e-3251.06Show/hide
Query:  HYGTFQGVANY----PPVGFPQPTRP----PGASDSYDPSQSQ----PYAHGYQ-AVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYVGA
        +YGTFQGVAN+    PP  F QP  P    PG   +Y   Q       YA G+   VP Y +VE RPM E  LPCCG+G GWFLFI+GF+F GIPWY+GA
Subjt:  HYGTFQGVANY----PPVGFPQPTRP----PGASDSYDPSQSQ----PYAHGYQ-AVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYVGA

Query:  ILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
         ++L   VD+REK GYVACSIA+V+  +A++ G T + ++W
Subjt:  ILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

AT1G29970.2 60S ribosomal protein L18A-18.7e-2854.92Show/hide
Query:  HYGTFQGVANY----PPVGFPQPTRP----PGASDSYDPSQSQ----PYAHGYQ-AVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYVGA
        +YGTFQGVAN+    PP  F QP  P    PG   +Y   Q       YA G+   VP Y +VE RPM E  LPCCG+G GWFLFI+GF+F GIPWY+GA
Subjt:  HYGTFQGVANY----PPVGFPQPTRP----PGASDSYDPSQSQ----PYAHGYQ-AVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYVGA

Query:  ILILCGRVDYREKPGYVACSIA
         ++L   VD+REK GYVACSIA
Subjt:  ILILCGRVDYREKPGYVACSIA

AT1G29970.3 60S ribosomal protein L18A-13.7e-2639.34Show/hide
Query:  HYGTFQGVANY----PPVGFPQPTRP----PGASDSYDPSQSQ----PYAHGYQ-AVPGYAIVEGRPMRERRLPCCGIGCGWFL----------------
        +YGTFQGVAN+    PP  F QP  P    PG   +Y   Q       YA G+   VP Y +VE RPM E  LPCCG+G GWFL                
Subjt:  HYGTFQGVANY----PPVGFPQPTRP----PGASDSYDPSQSQ----PYAHGYQ-AVPGYAIVEGRPMRERRLPCCGIGCGWFL----------------

Query:  --------------------------FIIGFVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
                                  FI+GF+F GIPWY+GA ++L   VD+REK GYVACSIA+V+  +A++ G T + ++W
Subjt:  --------------------------FIIGFVFVGIPWYVGAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW

AT1G53560.1 Ribosomal protein L18ae family2.7e-3753.96Show/hide
Query:  YGTFQGVANYPP------------VGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYVGAIL
        YGTFQGV  YPP            +G PQP+ PPG S  +D S  Q Y   +Q V GY + +GRP R+ RLPCCG+G GWFLFIIGF+   IPWYVG  +
Subjt:  YGTFQGVANYPP------------VGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYVGAIL

Query:  ILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW
        ++C R+D REKPGYVAC+IAAV+AT+ I+FG      VW
Subjt:  ILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAGGAAGAAAAGTCCGCAGCCGTGGGGGTCGTCGTTCACCACCACCACGAATCAAATTCCGGCCACCCTCACTATGGAACCTTCCAAGGCGTCGCCAATTATCC
TCCCGTCGGATTCCCTCAGCCTACTCGCCCGCCTGGTGCTTCCGACTCCTATGATCCTTCTCAATCTCAGCCCTATGCTCATGGCTATCAAGCTGTCCCTGGATACGCCA
TTGTTGAAGGAAGACCAATGAGAGAGCGGCGCCTTCCTTGCTGTGGTATTGGCTGTGGGTGGTTCCTGTTCATTATTGGTTTCGTCTTTGTTGGTATCCCATGGTATGTT
GGGGCAATTCTTATACTATGTGGCAGGGTGGACTACCGTGAGAAACCAGGATATGTTGCTTGCTCAATTGCTGCTGTTATTGCGACAGTTGCCATTCTTTTTGGTGCAAC
GAAGGAAGCTGATGTCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAGGAAGAAAAGTCCGCAGCCGTGGGGGTCGTCGTTCACCACCACCACGAATCAAATTCCGGCCACCCTCACTATGGAACCTTCCAAGGCGTCGCCAATTATCC
TCCCGTCGGATTCCCTCAGCCTACTCGCCCGCCTGGTGCTTCCGACTCCTATGATCCTTCTCAATCTCAGCCCTATGCTCATGGCTATCAAGCTGTCCCTGGATACGCCA
TTGTTGAAGGAAGACCAATGAGAGAGCGGCGCCTTCCTTGCTGTGGTATTGGCTGTGGGTGGTTCCTGTTCATTATTGGTTTCGTCTTTGTTGGTATCCCATGGTATGTT
GGGGCAATTCTTATACTATGTGGCAGGGTGGACTACCGTGAGAAACCAGGATATGTTGCTTGCTCAATTGCTGCTGTTATTGCGACAGTTGCCATTCTTTTTGGTGCAAC
GAAGGAAGCTGATGTCTGGTAA
Protein sequenceShow/hide protein sequence
MSQEEKSAAVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGASDSYDPSQSQPYAHGYQAVPGYAIVEGRPMRERRLPCCGIGCGWFLFIIGFVFVGIPWYV
GAILILCGRVDYREKPGYVACSIAAVIATVAILFGATKEADVW