; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037753 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037753
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:8855317..8858470
RNA-Seq ExpressionLag0037753
SyntenyLag0037753
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4263564.1 unnamed protein product [Prunus armeniaca]8.7e-1323.6Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWW----------------CGVEED-----RRIT--GQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVRP
        M+ FRLP  L  EI  ++A+FWW                C  + D     R +T   QA+L      +   P S +AR+ K RY+P S+FL A    +  
Subjt:  MNCFRLPKKLIAEINRLMARFWW----------------CGVEED-----RRIT--GQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVRP

Query:  LSGRVLCGGRSYWEGGLLEDWERGKSESPD------------------------ARVRDLFTASRQWNEALIRHHFRPQEARHILSIPL-----------
         + + L  GR     GL   W  G     +                        +RV DLFTAS  W+   +   F   EA  ILSIPL           
Subjt:  LSGRVLCGGRSYWEGGLLEDWERGKSESPD------------------------ARVRDLFTASRQWNEALIRHHFRPQEARHILSIPL-----------

Query:  --RQGPLLAQS---------------------PSSSSLELLHRWWKDCWSMKVRAVESPLVLALRNELRQKRKV------------------------SI
          + G    +S                     PSSSSL    + WK  W +KV      L+  +  ++   ++V                        ++
Subjt:  --RQGPLLAQS---------------------PSSSSLELLHRWWKDCWSMKVRAVESPLVLALRNELRQKRKV------------------------SI

Query:  ANLTDWVVGYLSAFRDAGRT--GWTCWWEGQAGRSAGGAPEFDGFKVNVDAAFCLESGATGEN--VRDA------------------AFAEGLAASVGLR
        A++  W+    S      ++   +T              P  + FK+NVD A  +E+GA G    VRD+                     E  A  VG+ 
Subjt:  ANLTDWVVGYLSAFRDAGRT--GWTCWWEGQAGRSAGGAPEFDGFKVNVDAAFCLESGATGEN--VRDA------------------AFAEGLAASVGLR

Query:  LAVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEG
         A+  +  P  +E+DSL+   ++  EEE ++  G L++   R +            R+ N+ AHR+ R ++ D+   +W++ G
Subjt:  LAVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEG

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.2e-1422.6Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRI------------------------TGQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVR
        M+CFRLPK+LI E + + ARFWW   +ED++I                          +A+L      + + P S L+RVLKGRY+    F+EA+     
Subjt:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRI------------------------TGQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVR

Query:  PLSGRVLCGGRSYWEGGLLEDWERGKSES---------PDARVRDLFTASR----------------QWNEALIRHHFRPQEARHILSIPLRQG------
            R +  GR   + GL   W  G  +S         P+     + ++ R                 W   ++R  F P EA+ ILSIP+ +G      
Subjt:  PLSGRVLCGGRSYWEGGLLEDWERGKSES---------PDARVRDLFTASR----------------QWNEALIRHHFRPQEARHILSIPLRQG------

Query:  ------------------PLL----AQSPSSSSLELLHRWWKDCWSMKV------------------------RAVE-----------------------
                           LL     Q+PSSSS E +  WW   W M +                        R VE                       
Subjt:  ------------------PLL----AQSPSSSSLELLHRWWKDCWSMKV------------------------RAVE-----------------------

Query:  --------------SPLVL------------------------------ALRNELRQKRKVSIANLTDWVVGYLSAFRDAGRTGWTCWWEGQAGRSA---
                      SP ++                              A  +  +   K+ +  L +W   Y   FR+A     T    G+   +A   
Subjt:  --------------SPLVL------------------------------ALRNELRQKRKVSIANLTDWVVGYLSAFRDAGRTGWTCWWEGQAGRSA---

Query:  GGAPEFDGFKVNVDAAFCLESGATG--------------------ENVRDAAFAEGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEEDVSELGML
           P+   +K+N DA+F       G                    EN++    AE +AA  GL+LA      P +                ED+SE G +
Subjt:  GGAPEFDGFKVNVDAAFCLESGATG--------------------ENVRDAAFAEGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEEDVSELGML

Query:  LEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEGRRVFWSCWLKRCLEV
        +  A            +F  REGN+ AH L R A+      +WME+     W   LK CLE+
Subjt:  LEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEGRRVFWSCWLKRCLEV

XP_023903860.1 uncharacterized protein LOC112015657 [Quercus suber]1.0e-1326.7Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRR---------------ITGQAMLEVA---------------SQPTSFLARVLKGRYYPSSEFLEARWEVV
        M CF+LP  L  EI  L+ +FWW G   DRR               I G    ++A                  +S L +V K R++P+S  +EA     
Subjt:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRR---------------ITGQAMLEVA---------------SQPTSFLARVLKGRYYPSSEFLEARWEVV

Query:  RPLSGRVLCGGRSYWEGGLLEDWERGKSESPDARVRDLFTASRQWNEALIRHHFRPQEARHILSIPLRQ--------------GPLLAQSP---SSSSLE
          +  R+   G   W+          ++ + D+ +  +   +R WNE L+   F  ++A  I  IPL +              G  + +S        LE
Subjt:  RPLSGRVLCGGRSYWEGGLLEDWERGKSESPDARVRDLFTASRQWNEALIRHHFRPQEARHILSIPLRQ--------------GPLLAQSP---SSSSLE

Query:  LL----------HRWWKDCWSMKV-RAVESPLVLALRNELRQKRKVSIAN-LTDWVVGYLSA-FRDAGRTGWTC-----WWEGQAGRSAGGA----PEFD
        LL           + WK  W M+V   +++ +  A RN L  K+ +     + D +         DA    W+C      W  Q G S  G     P  D
Subjt:  LL----------HRWWKDCWSMKV-RAVESPLVLALRNELRQKRKVSIAN-LTDWVVGYLSA-FRDAGRTGWTC-----WWEGQAGRSAGGA----PEFD

Query:  GF-KVNVDAAFCLESGATG-----------------ENVRDAAFA---EGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVR
        GF K+N D A    S ++G                 E +  A  A   E LAA   ++ A     +  ++E DSL + K L+ EE ++S LG+L+ED   
Subjt:  GF-KVNVDAAFCLESGATG-----------------ENVRDAAFA---EGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVR

Query:  GVPAGWFVRGSFTY--REGNRVAHRLVRLAIEDRCDRVWMEE
         + A  FV  S+++  R GN VAH LV+ AI     +VW+E+
Subjt:  GVPAGWFVRGSFTY--REGNRVAHRLVRLAIEDRCDRVWMEE

XP_027109195.1 uncharacterized protein LOC113729068 [Coffea arabica]1.5e-1223.9Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWW-----------------CGVEED-------------RRITGQAMLEVASQPTSFLARVLKGRYYPSSEFLEARWEVV
        M+CF+ P  L++ I  +M +FWW                 C  +ED               +T QA   +A+QP+S L +V K +Y+P+SEF  A     
Subjt:  MNCFRLPKKLIAEINRLMARFWW-----------------CGVEED-------------RRITGQAMLEVASQPTSFLARVLKGRYYPSSEFLEARWEVV

Query:  RPLSGRVLCGGRSYWEGGLLEDWERGKSESPDARVRDLFTASRQWNEALIRHHFRPQEARHILSIPLRQGPLLAQSPSSSSLELLHRWWKDCWSMKVRAV
           + R +   R Y E G    W  G              A + W  + +    R   A +++S                        W     +K++  
Subjt:  RPLSGRVLCGGRSYWEGGLLEDWERGKSESPDARVRDLFTASRQWNEALIRHHFRPQEARHILSIPLRQGPLLAQSPSSSSLELLHRWWKDCWSMKVRAV

Query:  ESPLVLALRNELRQKRKVSI--------ANLTDWVVGYLSAFRDAGRTGWTCWWE---GQAGRSAGGAPEFDGFKVNVDAAFCLESGATGENV--RDA--
        E  LV  +   L   R  ++         +L  + + +LS FR+A R            Q+  S    P     K N D A  +E   +G  V  RDA  
Subjt:  ESPLVLALRNELRQKRKVSI--------ANLTDWVVGYLSAFRDAGRTGWTCWWE---GQAGRSAGGAPEFDGFKVNVDAAFCLESGATGENV--RDA--

Query:  ------------AFA----EGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAI
                     FA    E  AA   + L +       ++E D L+V K+LQ  E D S  GML++D +R + +      S+  R+ N VAHR+ + A 
Subjt:  ------------AFA----EGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAI

Query:  EDRCDRVWME
              +W +
Subjt:  EDRCDRVWME

XP_035551149.1 uncharacterized protein LOC118349712 [Juglans regia]1.1e-1224.42Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRI------------------------TGQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVR
        M+ F+LPK+L  +I  LM++FWW   +++R I                          +AML      +  +P S +ARV K +Y+ + +FLEA      
Subjt:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRI------------------------TGQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVR

Query:  PLSGRVLCGGRSYWEG-GLLED---WERGKSES-------------------------PDARVRDLFTASR-QWNEALIRHHFRPQEARHILSIP-----
        PL        +S W   GL+++   W  G  +S                         P+A+V +L      +W E ++ + F  +EA+ I +IP     
Subjt:  PLSGRVLCGGRSYWEG-GLLED---WERGKSES-------------------------PDARVRDLFTASR-QWNEALIRHHFRPQEARHILSIP-----

Query:  ----------------------LRQGPLLAQSPSSSSLELLHRWWKDCWSMKVRAVESPL-----VLALRNELRQKRK-VSIANLTDWVVGYLSAFRDAG
                              + Q   +   PS    E+    WK  WS+ V  V         +   RN++  + K VS   +    +G L  F  A 
Subjt:  ----------------------LRQGPLLAQSPSSSSLELLHRWWKDCWSMKVRAVESPL-----VLALRNELRQKRK-VSIANLTDWVVGYLSAFRDAG

Query:  R-TGWTCWWEGQAGRSAG-GAPEFDGFKVNVDAAFCLESGATGEN--VRDAAFAEGLAASVGLRLAVGTATRPF----------------------VVET
        +  G       + GR      P    FK N D A  +E    G    VRD+   E +A+  G +   G+ T PF                      ++E 
Subjt:  R-TGWTCWWEGQAGRSAG-GAPEFDGFKVNVDAAFCLESGATGEN--VRDAAFAEGLAASVGLRLAVGTATRPF----------------------VVET

Query:  DSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRG----SFTYREGNRVAHRLVRLAIEDRCDRVWME
        D+  +   +  E ED S  G L+ED    +   W  R      F YREGN VAH L +LA++   +  W+E
Subjt:  DSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRG----SFTYREGNRVAHRLVRLAIEDRCDRVWME

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189545.9e-1522.6Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRI------------------------TGQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVR
        M+CFRLPK+LI E + + ARFWW   +ED++I                          +A+L      + + P S L+RVLKGRY+    F+EA+     
Subjt:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRI------------------------TGQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVR

Query:  PLSGRVLCGGRSYWEGGLLEDWERGKSES---------PDARVRDLFTASR----------------QWNEALIRHHFRPQEARHILSIPLRQG------
            R +  GR   + GL   W  G  +S         P+     + ++ R                 W   ++R  F P EA+ ILSIP+ +G      
Subjt:  PLSGRVLCGGRSYWEGGLLEDWERGKSES---------PDARVRDLFTASR----------------QWNEALIRHHFRPQEARHILSIPLRQG------

Query:  ------------------PLL----AQSPSSSSLELLHRWWKDCWSMKV------------------------RAVE-----------------------
                           LL     Q+PSSSS E +  WW   W M +                        R VE                       
Subjt:  ------------------PLL----AQSPSSSSLELLHRWWKDCWSMKV------------------------RAVE-----------------------

Query:  --------------SPLVL------------------------------ALRNELRQKRKVSIANLTDWVVGYLSAFRDAGRTGWTCWWEGQAGRSA---
                      SP ++                              A  +  +   K+ +  L +W   Y   FR+A     T    G+   +A   
Subjt:  --------------SPLVL------------------------------ALRNELRQKRKVSIANLTDWVVGYLSAFRDAGRTGWTCWWEGQAGRSA---

Query:  GGAPEFDGFKVNVDAAFCLESGATG--------------------ENVRDAAFAEGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEEDVSELGML
           P+   +K+N DA+F       G                    EN++    AE +AA  GL+LA      P +                ED+SE G +
Subjt:  GGAPEFDGFKVNVDAAFCLESGATG--------------------ENVRDAAFAEGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEEDVSELGML

Query:  LEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEGRRVFWSCWLKRCLEV
        +  A            +F  REGN+ AH L R A+      +WME+     W   LK CLE+
Subjt:  LEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEGRRVFWSCWLKRCLEV

A0A6J5TIF9 Reverse transcriptase domain-containing protein4.2e-1323.6Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWW----------------CGVEED-----RRIT--GQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVRP
        M+ FRLP  L  EI  ++A+FWW                C  + D     R +T   QA+L      +   P S +AR+ K RY+P S+FL A    +  
Subjt:  MNCFRLPKKLIAEINRLMARFWW----------------CGVEED-----RRIT--GQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVVRP

Query:  LSGRVLCGGRSYWEGGLLEDWERGKSESPD------------------------ARVRDLFTASRQWNEALIRHHFRPQEARHILSIPL-----------
         + + L  GR     GL   W  G     +                        +RV DLFTAS  W+   +   F   EA  ILSIPL           
Subjt:  LSGRVLCGGRSYWEGGLLEDWERGKSESPD------------------------ARVRDLFTASRQWNEALIRHHFRPQEARHILSIPL-----------

Query:  --RQGPLLAQS---------------------PSSSSLELLHRWWKDCWSMKVRAVESPLVLALRNELRQKRKV------------------------SI
          + G    +S                     PSSSSL    + WK  W +KV      L+  +  ++   ++V                        ++
Subjt:  --RQGPLLAQS---------------------PSSSSLELLHRWWKDCWSMKVRAVESPLVLALRNELRQKRKV------------------------SI

Query:  ANLTDWVVGYLSAFRDAGRT--GWTCWWEGQAGRSAGGAPEFDGFKVNVDAAFCLESGATGEN--VRDA------------------AFAEGLAASVGLR
        A++  W+    S      ++   +T              P  + FK+NVD A  +E+GA G    VRD+                     E  A  VG+ 
Subjt:  ANLTDWVVGYLSAFRDAGRT--GWTCWWEGQAGRSAGGAPEFDGFKVNVDAAFCLESGATGEN--VRDA------------------AFAEGLAASVGLR

Query:  LAVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEG
         A+  +  P  +E+DSL+   ++  EEE ++  G L++   R +            R+ N+ AHR+ R ++ D+   +W++ G
Subjt:  LAVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEG

A0A803QCV6 Uncharacterized protein1.1e-1623.85Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRI------------------------TGQAML-----EVASQPTSFLARVLKGRYYPSSEFLEAR-----
        M+CFRLPK+LI +I+ +MARFWW   +  R+I                          QA+L     ++ + P S LARVLK  YY +S FLEA+     
Subjt:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRI------------------------TGQAML-----EVASQPTSFLARVLKGRYYPSSEFLEAR-----

Query:  ---WEVV-------------RPLSGRVLCGGRSYWEGGLLEDWERGKSESPDARVRD-LFTASRQWNEALIRHHFRPQEARHILSIP-------------
           W  +             R +SGR +      W         R K+  P     D L  A   W   ++ + F   +   IL I              
Subjt:  ---WEVV-------------RPLSGRVLCGGRSYWEGGLLEDWERGKSESPDARVRD-LFTASRQWNEALIRHHFRPQEARHILSIP-------------

Query:  ------------LRQGPLLAQSPSSSSLELLHRWWKDCWSMK--VRAVESPLVLALRNEL--RQKRKVSI-----------ANL-TDWVVGYLSAFRDAG
                     ++          S  EL   WWK  W ++  +R+  S    A+   L  R K+ ++I           A L  D+++  +   +D  
Subjt:  ------------LRQGPLLAQSPSSSSLELLHRWWKDCWSMK--VRAVESPLVLALRNEL--RQKRKVSI-----------ANL-TDWVVGYLSAFRDAG

Query:  RTGW---TCWWEGQAGRSAGGAPEFDGFKVNVDAAF----------CLESGATGENVR----------DAAFAEGLAASVGLRLAVGTATRPFVVETDSL
         T        WEG         P  + F +N DA+            L    +G+ +               AE LA  +G++LA+ TA  PF+++TD +
Subjt:  RTGW---TCWWEGQAGRSAGGAPEFDGFKVNVDAAF----------CLESGATGENVR----------DAAFAEGLAASVGLRLAVGTATRPFVVETDSL

Query:  RVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEGRRVFWSC---WLKRCLEVLYGLGWGLAML-LSMD
        R +  L+   +  ++   LLE+          +      R+ N+ AH L + AI  +C+++WM +    + SC   +    +  L+ L   L  L L MD
Subjt:  RVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEEGRRVFWSC---WLKRCLEVLYGLGWGLAML-LSMD

Query:  LLFYPCSICRLLNACGWGLG
        LL   C+  +     G+  G
Subjt:  LLFYPCSICRLLNACGWGLG

A0A803QK36 Uncharacterized protein6.5e-1425.2Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWW-----------------CG------------VEEDRRITGQAMLEVASQPTSFLARVLKGRYYPSSEFLEARWEVVR
        M+CF+LP KL  +I +LM+RFWW                 C             V  ++ +  +    +   P+S LARVLK RY+ +  FLEA      
Subjt:  MNCFRLPKKLIAEINRLMARFWW-----------------CG------------VEEDRRITGQAMLEVASQPTSFLARVLKGRYYPSSEFLEARWEVVR

Query:  PLSGRVLCGGRSYWEGGLLEDWERGKSESPDARVRDLFTASRQWNEALIRHHFRPQEARHILSIPLRQGPLLAQSPSSSSLELLHRWWKDCWSMKVRAVE
         L+ + +  G S ++  L    +R      D +V D  T SRQW+   ++  F P +   ILSIPL   P          + L H      +++K     
Subjt:  PLSGRVLCGGRSYWEGGLLEDWERGKSESPDARVRDLFTASRQWNEALIRHHFRPQEARHILSIPLRQGPLLAQSPSSSSLELLHRWWKDCWSMKVRAVE

Query:  SPLVLALRNELRQKRKVSIANLTDWVVGYLSAFRDAGRTGWTCWWEGQAGRSAGGAPEFDGFKVNVDAAFC--LESGATGENVRDAAFAEGLAASVGLRL
        +  VL  +    Q     + N+   V G  +  R++  TG                        ++ AA    ++     E +   A A GL   + LRL
Subjt:  SPLVLALRNELRQKRKVSIANLTDWVVGYLSAFRDAGRTGWTCWWEGQAGRSAGGAPEFDGFKVNVDAAFC--LESGATGENVRDAAFAEGLAASVGLRL

Query:  AVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEE
         V        +E+DSL V   L+   + +S   ++L D    +      + S  YR  N  AH L + A+    D  W+EE
Subjt:  AVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLAIEDRCDRVWMEE

M5Y0P9 RNase H domain-containing protein1.1e-1326.08Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRITGQAM----------------LEVASQPTSFLARVLKGRYYPSSEFLEARWEVVRPLSGRVLCGGR--
        M+CF LPK +  ++N+L+A+FWW    E+++I   A                   +     S + RVLK +Y+P+  FLE        +  + LC  R  
Subjt:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRITGQAM----------------LEVASQPTSFLARVLKGRYYPSSEFLEARWEVVRPLSGRVLCGGR--

Query:  ----SYWE---GGLLEDWE----------RGKSESPD----ARVRDLFTA-SRQWNEALIRHHFRPQEARHILSIP--LRQGP----------LLAQSPS
            S W+   G  +  WE          R  S  P+     +V DL    SR+WN  L+++ F P+E   I SIP  LR  P          +L + P 
Subjt:  ----SYWE---GGLLEDWE----------RGKSESPD----ARVRDLFTA-SRQWNEALIRHHFRPQEARHILSIP--LRQGP----------LLAQSPS

Query:  SSSLELLHRWWKDCWSMKVRAVESPLVLALR--NELRQKRKVSIANLTDWV---VGYLSA--FRDAGRTGWTCW-------WEGQAGR------------
         SS+ +L    +DC    + A  S  + + R  N+    +        DWV      LS   F +    GW  W       W  +  R            
Subjt:  SSSLELLHRWWKDCWSMKVRAVESPLVLALR--NELRQKRKVSIANLTDWV---VGYLSA--FRDAGRTGWTCW-------WEGQAGR------------

Query:  -------SAGGAPEFDG-------------FKVNVDAAF--CLESGATGENVRDAA---FAEGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEED
               +  G+    G              K+NVD A+      G  G  VRD+     AE LAA  G  LA+    +  V E+D+L++   L+    D
Subjt:  -------SAGGAPEFDG-------------FKVNVDAAF--CLESGATGENVRDAA---FAEGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEED

Query:  VSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLA
         S +G ++ED    +        +  +R  N VAHRL R A
Subjt:  VSELGMLLEDAVRGVPAGWFVRGSFTYREGNRVAHRLVRLA

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.8e-0527.5Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRIT-------------------------GQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVV
        M+CFRL K L  ++   M  FWW   E  R+I+                          QA+L      +  QP + L+R+L+ RY+P S  +E      
Subjt:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRIT-------------------------GQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVV

Query:  RPLSGRVLCGGRSYWEGGLL
           + R +  GR     GLL
Subjt:  RPLSGRVLCGGRSYWEGGLL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.1e-0424.64Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWWCGVEEDR-----------------------------RITGQAMLEVASQPTSFLARVLKGRYYPSSEFLEARWEVVR
        M CF LPK +  +I  ++A FWW   +E +                              + G+ M  + S+P S +A+V K RY+  S+ L A      
Subjt:  MNCFRLPKKLIAEINRLMARFWWCGVEEDR-----------------------------RITGQAMLEVASQPTSFLARVLKGRYYPSSEFLEARWEVVR

Query:  PLSGRVLCGGRS-YWEGGLLEDWERGKSESPDARV--RDLFTASRQWNEALIRHHFRPQEARHILSIPLRQGPLLAQSPSSSSLELLHRWWKDCWSMKVR
        PL  R     +S +    +L    R    + +  +  R  +  S+  + AL      PQE   + SI L+   L+ +S           W KD   M   
Subjt:  PLSGRVLCGGRS-YWEGGLLEDWERGKSESPDARV--RDLFTASRQWNEALIRHHFRPQEARHILSIPLRQGPLLAQSPSSSSLELLHRWWKDCWSMKVR

Query:  AVESPLVLALR
         VE  L+  LR
Subjt:  AVESPLVLALR

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-0627.5Show/hide
Query:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRIT-------------------------GQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVV
        M+CFRL K L  ++   M  FWW   E  R+I+                          QA+L      +  QP + L+R+L+ RY+P S  +E      
Subjt:  MNCFRLPKKLIAEINRLMARFWWCGVEEDRRIT-------------------------GQAML-----EVASQPTSFLARVLKGRYYPSSEFLEARWEVV

Query:  RPLSGRVLCGGRSYWEGGLL
           + R +  GR     GLL
Subjt:  RPLSGRVLCGGRSYWEGGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTGCTTCCGGCTCCCGAAGAAGCTTATTGCTGAGATAAATCGTTTGATGGCAAGGTTTTGGTGGTGTGGGGTGGAGGAGGATAGAAGGATCACTGGCCAAGCAAT
GCTGGAGGTGGCCAGTCAGCCGACTTCTTTTCTTGCTCGTGTCCTGAAAGGGCGGTACTACCCGTCCTCGGAGTTTTTGGAGGCAAGGTGGGAAGTCGTCCGTCCTTTAT
CTGGAAGAGTCTTATGTGGGGGAAGGAGTTACTGGGAAGGGGGTTTATTGGAGGATTGGGAACGGGGAAAGAGTGAGAGTCCTGATGCTAGAGTTAGGGATTTGTTCACT
GCATCAAGGCAGTGGAATGAGGCTCTTATCCGACATCATTTTAGGCCGCAGGAGGCGAGGCACATCCTTTCTATTCCTTTACGCCAGGGGCCGCTGCTGGCCCAAAGTCC
TTCATCCTCGTCTCTGGAGTTGTTGCATAGGTGGTGGAAGGACTGTTGGAGTATGAAGGTTAGGGCAGTCGAGTCTCCACTTGTTTTGGCACTGCGGAATGAACTGAGAC
AGAAGAGGAAAGTTTCGATTGCAAATCTGACAGATTGGGTTGTTGGGTATCTTAGCGCTTTTCGTGATGCGGGAAGGACGGGGTGGACCTGTTGGTGGGAAGGCCAGGCC
GGGCGGTCTGCAGGTGGGGCGCCAGAGTTTGATGGGTTTAAAGTGAATGTTGATGCGGCGTTTTGCCTGGAGAGCGGGGCGACGGGTGAGAACGTTAGAGATGCAGCTTT
TGCAGAAGGGCTGGCGGCCTCCGTCGGCTTGAGGCTTGCGGTGGGGACGGCTACCAGACCTTTTGTGGTGGAGACAGATTCGTTGCGGGTGTCCAAGTTGCTGCAGCGTG
AGGAGGAGGACGTGTCGGAGTTGGGGATGCTGTTGGAGGATGCGGTGAGGGGTGTTCCAGCGGGGTGGTTTGTCAGGGGCAGTTTTACGTACAGGGAAGGTAACCGTGTT
GCCCATCGTTTGGTGAGGTTGGCAATAGAGGACAGATGTGACCGTGTGTGGATGGAAGAGGGCCGACGTGTGTTTTGGTCTTGTTGGCTGAAGAGGTGTCTGGAGGTTCT
CTATGGTTTAGGGTGGGGGTTGGCCATGTTGCTGAGCATGGATCTGCTGTTTTATCCTTGTAGTATCTGTAGACTGTTGAACGCATGTGGTTGGGGTCTTGGTGGAACTT
ATCAGGCCTTTTTCCTAGATAGTCTTGAAGGCTCTGGTTTGTATTATGGGCTCTGTAGATCTGTTGTCACCCCGATAGGTGCAAGGCAGAGCGGGAGGTCTAATTGTTGC
AATCTTGTGGGTGTGCTTGGCCTGGGCCCTGGGTTTGAGAACACTCCTTTTTTGCATCTTTTAGGTTTTTTGCGAAGCTTTGGTGCCAGTGTAGGGGGAAGATGGGTGGA
GGAGCTTATAAGCCTTTCTTGGGCTGGTAGGGGCTTCTGGAGGGCTAATGACCGATGGTGGGAGCCGACTTGGTGCTATGTGGTGTTGAAGGGAGCAAAGCTGGATGCTA
GTCTGGGGTATGATGTCAGGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTGCTTCCGGCTCCCGAAGAAGCTTATTGCTGAGATAAATCGTTTGATGGCAAGGTTTTGGTGGTGTGGGGTGGAGGAGGATAGAAGGATCACTGGCCAAGCAAT
GCTGGAGGTGGCCAGTCAGCCGACTTCTTTTCTTGCTCGTGTCCTGAAAGGGCGGTACTACCCGTCCTCGGAGTTTTTGGAGGCAAGGTGGGAAGTCGTCCGTCCTTTAT
CTGGAAGAGTCTTATGTGGGGGAAGGAGTTACTGGGAAGGGGGTTTATTGGAGGATTGGGAACGGGGAAAGAGTGAGAGTCCTGATGCTAGAGTTAGGGATTTGTTCACT
GCATCAAGGCAGTGGAATGAGGCTCTTATCCGACATCATTTTAGGCCGCAGGAGGCGAGGCACATCCTTTCTATTCCTTTACGCCAGGGGCCGCTGCTGGCCCAAAGTCC
TTCATCCTCGTCTCTGGAGTTGTTGCATAGGTGGTGGAAGGACTGTTGGAGTATGAAGGTTAGGGCAGTCGAGTCTCCACTTGTTTTGGCACTGCGGAATGAACTGAGAC
AGAAGAGGAAAGTTTCGATTGCAAATCTGACAGATTGGGTTGTTGGGTATCTTAGCGCTTTTCGTGATGCGGGAAGGACGGGGTGGACCTGTTGGTGGGAAGGCCAGGCC
GGGCGGTCTGCAGGTGGGGCGCCAGAGTTTGATGGGTTTAAAGTGAATGTTGATGCGGCGTTTTGCCTGGAGAGCGGGGCGACGGGTGAGAACGTTAGAGATGCAGCTTT
TGCAGAAGGGCTGGCGGCCTCCGTCGGCTTGAGGCTTGCGGTGGGGACGGCTACCAGACCTTTTGTGGTGGAGACAGATTCGTTGCGGGTGTCCAAGTTGCTGCAGCGTG
AGGAGGAGGACGTGTCGGAGTTGGGGATGCTGTTGGAGGATGCGGTGAGGGGTGTTCCAGCGGGGTGGTTTGTCAGGGGCAGTTTTACGTACAGGGAAGGTAACCGTGTT
GCCCATCGTTTGGTGAGGTTGGCAATAGAGGACAGATGTGACCGTGTGTGGATGGAAGAGGGCCGACGTGTGTTTTGGTCTTGTTGGCTGAAGAGGTGTCTGGAGGTTCT
CTATGGTTTAGGGTGGGGGTTGGCCATGTTGCTGAGCATGGATCTGCTGTTTTATCCTTGTAGTATCTGTAGACTGTTGAACGCATGTGGTTGGGGTCTTGGTGGAACTT
ATCAGGCCTTTTTCCTAGATAGTCTTGAAGGCTCTGGTTTGTATTATGGGCTCTGTAGATCTGTTGTCACCCCGATAGGTGCAAGGCAGAGCGGGAGGTCTAATTGTTGC
AATCTTGTGGGTGTGCTTGGCCTGGGCCCTGGGTTTGAGAACACTCCTTTTTTGCATCTTTTAGGTTTTTTGCGAAGCTTTGGTGCCAGTGTAGGGGGAAGATGGGTGGA
GGAGCTTATAAGCCTTTCTTGGGCTGGTAGGGGCTTCTGGAGGGCTAATGACCGATGGTGGGAGCCGACTTGGTGCTATGTGGTGTTGAAGGGAGCAAAGCTGGATGCTA
GTCTGGGGTATGATGTCAGGGTGTAA
Protein sequenceShow/hide protein sequence
MNCFRLPKKLIAEINRLMARFWWCGVEEDRRITGQAMLEVASQPTSFLARVLKGRYYPSSEFLEARWEVVRPLSGRVLCGGRSYWEGGLLEDWERGKSESPDARVRDLFT
ASRQWNEALIRHHFRPQEARHILSIPLRQGPLLAQSPSSSSLELLHRWWKDCWSMKVRAVESPLVLALRNELRQKRKVSIANLTDWVVGYLSAFRDAGRTGWTCWWEGQA
GRSAGGAPEFDGFKVNVDAAFCLESGATGENVRDAAFAEGLAASVGLRLAVGTATRPFVVETDSLRVSKLLQREEEDVSELGMLLEDAVRGVPAGWFVRGSFTYREGNRV
AHRLVRLAIEDRCDRVWMEEGRRVFWSCWLKRCLEVLYGLGWGLAMLLSMDLLFYPCSICRLLNACGWGLGGTYQAFFLDSLEGSGLYYGLCRSVVTPIGARQSGRSNCC
NLVGVLGLGPGFENTPFLHLLGFLRSFGASVGGRWVEELISLSWAGRGFWRANDRWWEPTWCYVVLKGAKLDASLGYDVRV