; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037865 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037865
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNucleic acid-binding, OB-fold containing protein
Genome locationchr2:9965065..9966335
RNA-Seq ExpressionLag0037865
SyntenyLag0037865
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146043.1 uncharacterized protein At4g28440 [Cucumis sativus]2.6e-7494.16Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQ+LQQTNAA RPGLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +ILRNAKIDMFKGSMRLAVDKWGRIEL +P +FVVKEDNNLSLVEYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

XP_008463705.1 PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo]1.2e-7494.16Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQ+LQQTNAAARPGLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +ILRNAKIDMFKGSMRLAVDKWGRIE+ +P +FVVKEDNNLSLVEYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

XP_022139613.1 uncharacterized protein At4g28440-like [Momordica charantia]4.6e-7190.91Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPAS ++QQ+NA ARPGLRKPVFVKVEQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +I+RNAKIDMFKGSMRLAVDKWGRIELTEP NFVVKEDNNLSLVEYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

XP_023535412.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo]4.5e-6688.31Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MAT KSPTPAS          R GLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECL+GDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +ILRNAKIDMFKGSMRLAVDKWGRIE+ EP NFVVKEDNNLSLVEYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

XP_038899654.1 uncharacterized protein At4g28440-like [Benincasa hispida]9.0e-7594.81Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQ+LQQ+NAAARPGLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +ILRNAKIDMFKGSMRLAVDKWGRIEL EP +FVVKEDNNLSLVEYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

TrEMBL top hitse value%identityAlignment
A0A0A0L242 Uncharacterized protein1.3e-7494.16Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQ+LQQTNAA RPGLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +ILRNAKIDMFKGSMRLAVDKWGRIEL +P +FVVKEDNNLSLVEYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

A0A1S3CKC4 uncharacterized protein At4g28440-like5.7e-7594.16Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQ+LQQTNAAARPGLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +ILRNAKIDMFKGSMRLAVDKWGRIE+ +P +FVVKEDNNLSLVEYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

A0A5D3DWE0 Nucleic acid-binding5.7e-7594.16Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPASQ+LQQTNAAARPGLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +ILRNAKIDMFKGSMRLAVDKWGRIE+ +P +FVVKEDNNLSLVEYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

A0A6J1CG19 uncharacterized protein At4g28440-like2.2e-7190.91Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MATGKSPTPAS ++QQ+NA ARPGLRKPVFVKVEQLKPGTNGHTL VKVV+SNTVLQKGRSVSQHLRQTRIAECLVGDETGTIL TARNDQVD VKP TT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +I+RNAKIDMFKGSMRLAVDKWGRIELTEP NFVVKEDNNLSLVEYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

A0A6J1FBC1 uncharacterized protein At4g28440-like2.8e-6687.66Show/hide
Query:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT
        MAT KSPTPAS          R GLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECL+GDETGTILFTARNDQVDQVKPGTT
Subjt:  MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTT

Query:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        +ILRNAKIDMFKGSMRLAVDKWGRIE+ EP NFVVKEDNNLSL+EYELVNVA+E
Subjt:  VILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284405.9e-4568.15Show/hide
Query:  RKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMRLAV
        RKPVFVKVEQLKPGT GHTL VKV+ +N V+   R      S+S+  + +RI ECL+GDETG ILFTARNDQVD +KPG TVILRN++IDMFKG+MRL V
Subjt:  RKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMRLAV

Query:  DKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        DKWGRIE T   +F VKEDNNLSLVEYEL+NV  +
Subjt:  DKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein7.9e-4566.18Show/hide
Query:  AAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMR
        A A   LRKPVF KV +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K G+ V LRNAKIDM+KGSMR
Subjt:  AAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMR

Query:  LAVDKWGRIELT-EPGNFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+  EP +  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIELT-EPGNFVVKEDNNLSLVEYELVNV

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein7.9e-4566.18Show/hide
Query:  AAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMR
        A A   LRKPVF KV +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLVGDETG I+FTARNDQVD +K G+ V LRNAKIDM+KGSMR
Subjt:  AAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMR

Query:  LAVDKWGRIELT-EPGNFVVKEDNNLSLVEYELVNV
        LAVD+WGR+E+  EP +  VK+DNNLSL+EYELV+V
Subjt:  LAVDKWGRIELT-EPGNFVVKEDNNLSLVEYELVNV

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein4.0e-4967.16Show/hide
Query:  AARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMRLAV
        + + GL+KP F KV+QL+PGT+GH + VK+VS+  VLQKGR+     RQ RI+EC+VGDETG I+FTARNDQVD +K G+TV LRNAKIDM+KGSMRLAV
Subjt:  AARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMRLAV

Query:  DKWGRIELTEPGNFVVKEDNNLSLVEYELVNVAD
        DKWGR+E+TEP +F VKED N+SL+EYELVNV +
Subjt:  DKWGRIELTEPGNFVVKEDNNLSLVEYELVNVAD

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein1.6e-5067.31Show/hide
Query:  GKSPTPASQDLQ----QTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQK-GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPG
        G++P P S   +    Q         +KPVFVKV+QLKPGT+GHTL VKVV  N+V QK G + S HLR  RI+ECLVGDET  ILFTARNDQV+ +KPG
Subjt:  GKSPTPASQDLQ----QTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQK-GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPG

Query:  TTVILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
         TV LRNAKIDMFKGSMRLAVDKWGRIE TEP +  VKEDNNLSLVEYELVNV +E
Subjt:  TTVILRNAKIDMFKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE

AT4G28440.1 Nucleic acid-binding, OB-fold-like protein4.2e-4668.15Show/hide
Query:  RKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMRLAV
        RKPVFVKVEQLKPGT GHTL VKV+ +N V+   R      S+S+  + +RI ECL+GDETG ILFTARNDQVD +KPG TVILRN++IDMFKG+MRL V
Subjt:  RKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDMFKGSMRLAV

Query:  DKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE
        DKWGRIE T   +F VKEDNNLSLVEYEL+NV  +
Subjt:  DKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGGCAAATCACCTACGCCGGCATCGCAGGACCTGCAGCAGACCAATGCGGCGGCGAGGCCAGGTCTGAGGAAGCCAGTCTTCGTTAAGGTCGAACAGCTCAA
GCCTGGCACTAATGGCCACACACTCATCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCGGTGTCTCAGCACCTTCGACAGACGCGGATCGCTGAGT
GCCTTGTTGGGGATGAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAGGTTGATCAAGTAAAACCTGGGACAACTGTCATTCTTCGAAATGCAAAGATTGACATG
TTCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGCTAACCGAGCCTGGTAATTTCGTTGTGAAGGAAGACAATAATCTATCTTTAGTTGAGTATGA
ACTTGTGAATGTTGCAGACGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGGGCAAATCACCTACGCCGGCATCGCAGGACCTGCAGCAGACCAATGCGGCGGCGAGGCCAGGTCTGAGGAAGCCAGTCTTCGTTAAGGTCGAACAGCTCAA
GCCTGGCACTAATGGCCACACACTCATCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCGGTGTCTCAGCACCTTCGACAGACGCGGATCGCTGAGT
GCCTTGTTGGGGATGAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAGGTTGATCAAGTAAAACCTGGGACAACTGTCATTCTTCGAAATGCAAAGATTGACATG
TTCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGCTAACCGAGCCTGGTAATTTCGTTGTGAAGGAAGACAATAATCTATCTTTAGTTGAGTATGA
ACTTGTGAATGTTGCAGACGAATGA
Protein sequenceShow/hide protein sequence
MATGKSPTPASQDLQQTNAAARPGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTVILRNAKIDM
FKGSMRLAVDKWGRIELTEPGNFVVKEDNNLSLVEYELVNVADE