; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037890 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037890
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionWD repeat-containing protein 20-like
Genome locationchr2:10243617..10244129
RNA-Seq ExpressionLag0037890
SyntenyLag0037890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607184.1 hypothetical protein SDJN03_00526, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2885.71Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGT NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
XP_022156951.1 dystrophia myotonica WD repeat-containing protein-like [Momordica charantia]2.7e-2884.42Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYS+SLRQQLQDVGKKLVGAQHYNKEGT NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
XP_022948722.1 WD repeat-containing protein 20-like [Cucurbita moschata]2.0e-2885.71Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGT NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
XP_022997935.1 WD repeat-containing protein 20-like [Cucurbita maxima]2.0e-2885.71Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGT NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
XP_023523294.1 WD repeat-containing protein 20-like [Cucurbita pepo subsp. pepo]2.0e-2885.71Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGT NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
TrEMBL top hitse value%identityAlignment
A0A5A7UNI0 Dystrophia myotonica WD repeat-containing protein-like2.9e-2884.42Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEG+ NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
A0A6J1DWI2 dystrophia myotonica WD repeat-containing protein-like1.3e-2884.42Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYS+SLRQQLQDVGKKLVGAQHYNKEGT NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
A0A6J1GA15 WD repeat-containing protein 20-like9.9e-2985.71Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGT NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
A0A6J1HZM7 dystrophia myotonica WD repeat-containing protein-like isoform X22.9e-2884.42Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEG+ NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
A0A6J1KBA4 WD repeat-containing protein 20-like9.9e-2985.71Show/hide
Query:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        GDLNSP KD IKSLHF  SNP+ HAFD E KDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGT NN +
Subjt:  GDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37160.1 Transducin/WD40 repeat-like superfamily protein1.2e-2672.37Show/hide
Query:  DLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        DLNS  KD +KS+H   SNP+ HAF  + KDGHDLLIGLNSGDVY+VSLRQQLQDVGKKLV AQHYNK+G+ NN +
Subjt:  DLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
AT2G37160.2 Transducin/WD40 repeat-like superfamily protein1.2e-2672.37Show/hide
Query:  DLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        DLNS  KD +KS+H   SNP+ HAF  + KDGHDLLIGLNSGDVY+VSLRQQLQDVGKKLV AQHYNK+G+ NN +
Subjt:  DLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
AT3G53390.1 Transducin/WD40 repeat-like superfamily protein3.1e-2773.68Show/hide
Query:  DLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ
        DLNS  KD +KS+HF  SNP+ HAFD + KDGHDLLIGLNSGDVY+VSLRQQLQDV KKLVGA HYNK+G+ NN +
Subjt:  DLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTCTTGTTGTTATCTTGTATGTTTCAGAATATATGGATCAAAACAAAACTTTAGCTCAGAGGAAGATGATCCTGAATATGTCTCATTCAGGTGACCTTAATTC
ACCAGGTAAGGATCGTATTAAGTCTTTGCATTTTAGAATTTCAAATCCTCTCTACCATGCATTTGATCTTGAAGTTAAGGATGGTCACGACCTACTTATTGGATTGAATT
CTGGAGATGTCTACTCGGTTTCTTTAAGACAACAATTACAAGATGTTGGGAAGAAGCTTGTTGGAGCCCAACATTATAATAAAGAGGGCACTTTCAATAACGGGCAAGAG
CATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGTCTTGTTGTTATCTTGTATGTTTCAGAATATATGGATCAAAACAAAACTTTAGCTCAGAGGAAGATGATCCTGAATATGTCTCATTCAGGTGACCTTAATTC
ACCAGGTAAGGATCGTATTAAGTCTTTGCATTTTAGAATTTCAAATCCTCTCTACCATGCATTTGATCTTGAAGTTAAGGATGGTCACGACCTACTTATTGGATTGAATT
CTGGAGATGTCTACTCGGTTTCTTTAAGACAACAATTACAAGATGTTGGGAAGAAGCTTGTTGGAGCCCAACATTATAATAAAGAGGGCACTTTCAATAACGGGCAAGAG
CATTAG
Protein sequenceShow/hide protein sequence
MVCLVVILYVSEYMDQNKTLAQRKMILNMSHSGDLNSPGKDRIKSLHFRISNPLYHAFDLEVKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAQHYNKEGTFNNGQE
H