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Lag0037891 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037891
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionWD repeat-containing protein 20-like
Genome locationchr2:10244841..10245817
RNA-Seq ExpressionLag0037891
SyntenyLag0037891
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607184.1 hypothetical protein SDJN03_00526, partial [Cucurbita argyrosperma subsp. sororia]3.7e-0790.62Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDSYWS PASDDT+ENVVYRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
KAG7036873.1 creC [Cucurbita argyrosperma subsp. argyrosperma]3.7e-0790.62Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDSYWS PASDDT+ENVVYRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
XP_022948722.1 WD repeat-containing protein 20-like [Cucurbita moschata]3.7e-0790.62Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDSYWS PASDDT+ENVVYRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
XP_022997935.1 WD repeat-containing protein 20-like [Cucurbita maxima]3.7e-0790.62Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDSYWS PASDDT+ENVVYRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
XP_023523294.1 WD repeat-containing protein 20-like [Cucurbita pepo subsp. pepo]3.7e-0790.62Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDSYWS PASDDT+ENVVYRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
TrEMBL top hitse value%identityAlignment
A0A0A0LS38 Uncharacterized protein2.9e-1384.09Show/hide
Query:  LKPWHIVDFLLQVSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        L PWH VDFLLQVSGVAFDSYWS P SDD +ENVVYRFGSVGQ+
Subjt:  LKPWHIVDFLLQVSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
A0A427AP99 Uncharacterized protein4.0e-0785.71Show/hide
Query:  FLLQVSGVAFDSYWSLPASDDTQENVVYRFGSVGQ
        FLLQVSGVAFDSYWS P S+ T ENVVYRFGSVGQ
Subjt:  FLLQVSGVAFDSYWSLPASDDTQENVVYRFGSVGQ
A0A6J1GA15 WD repeat-containing protein 20-like1.8e-0790.62Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDSYWS PASDDT+ENVVYRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
A0A6J1KBA4 WD repeat-containing protein 20-like1.8e-0790.62Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDSYWS PASDDT+ENVVYRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
M7Z123 Uncharacterized protein4.0e-0780.56Show/hide
Query:  FLLQVSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        FLLQVS VAFDSYWS P+SDD  ENV+YRFGSVGQ+
Subjt:  FLLQVSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37160.1 Transducin/WD40 repeat-like superfamily protein6.1e-0875Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDSYWS P S+ + ENV+YRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
AT2G37160.2 Transducin/WD40 repeat-like superfamily protein6.1e-0875Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDSYWS P S+ + ENV+YRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
AT3G53390.1 Transducin/WD40 repeat-like superfamily protein8.8e-0771.88Show/hide
Query:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE
        VSGVAFDS WS P SD + E+V+YRFGSVGQ+
Subjt:  VSGVAFDSYWSLPASDDTQENVVYRFGSVGQE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGTGATTATTGATATTGGTTTGATGCTTTTGGCGGTCGATGTACCAACATTTCATGGATTCCGAAAAGTGATGATGCTTTTGTTGTTGCTCATGCTGATGGAAAT
TTGTATGTCTAAGAAAAGGAAAGCTTGTTTTGATAAATGTGGCTATATCCTGCTCATGAGTCATGCTGATGGAAATTTTCTCAAGCCTTGGCACATTGTGGACTTTTTAC
TTCAGGTAAGTGGTGTAGCTTTTGATTCATATTGGTCATTACCAGCTTCAGATGACACACAGGAAAATGTTGTTTACCGATTTGGTTCAGTTGGTCAGGAGAATGATGCA
CACCCTGCATTTTACCACAAAATCTTGGCTCATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGTGATTATTGATATTGGTTTGATGCTTTTGGCGGTCGATGTACCAACATTTCATGGATTCCGAAAAGTGATGATGCTTTTGTTGTTGCTCATGCTGATGGAAAT
TTGTATGTCTAAGAAAAGGAAAGCTTGTTTTGATAAATGTGGCTATATCCTGCTCATGAGTCATGCTGATGGAAATTTTCTCAAGCCTTGGCACATTGTGGACTTTTTAC
TTCAGGTAAGTGGTGTAGCTTTTGATTCATATTGGTCATTACCAGCTTCAGATGACACACAGGAAAATGTTGTTTACCGATTTGGTTCAGTTGGTCAGGAGAATGATGCA
CACCCTGCATTTTACCACAAAATCTTGGCTCATTACTAG
Protein sequenceShow/hide protein sequence
MYVIIDIGLMLLAVDVPTFHGFRKVMMLLLLLMLMEICMSKKRKACFDKCGYILLMSHADGNFLKPWHIVDFLLQVSGVAFDSYWSLPASDDTQENVVYRFGSVGQENDA
HPAFYHKILAHY