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Lag0037893 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037893
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHistidine-rich glycoprotein-like isoform X2
Genome locationchr2:10280396..10280725
RNA-Seq ExpressionLag0037893
SyntenyLag0037893
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064320.1 histidine-rich glycoprotein-like isoform X2 [Cucumis melo var. makuwa]3.1e-0545.68Show/hide
Query:  IIAAMVAASIALLPMATEAHVIPTVGPVADCIKGCTGSLTSLTPGYCLSICQAEFVVPRVHPHPHPNPHPHPHPHPHPEAQ
        +I A ++  I  LPM  EA  IP VGP+A CI+GCT SL++LTPGYC++IC AE+       HP  NP    H   H + +
Subjt:  IIAAMVAASIALLPMATEAHVIPTVGPVADCIKGCTGSLTSLTPGYCLSICQAEFVVPRVHPHPHPNPHPHPHPHPHPEAQ

KAG6591952.1 hypothetical protein SDJN03_14298, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0950.59Show/hide
Query:  ATTTTPRIMLLIIAAMVAASI-ALLPMATEAHVIPTVGPVADCIKGCTGSLTSLTPGYCLSICQAEFVVPRVHPHPHPNPHPHPH
        +T +TPR +L+++  MVA  I  LLPMA EA  +P  G V+ CI+GCT SL  LT GYCL++C AEF     HPH H + H H H
Subjt:  ATTTTPRIMLLIIAAMVAASI-ALLPMATEAHVIPTVGPVADCIKGCTGSLTSLTPGYCLSICQAEFVVPRVHPHPHPNPHPHPH

KAG6607883.1 hypothetical protein SDJN03_01225, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1052.69Show/hide
Query:  MNSKAATTTTPRIMLLIIAAMVAASIALLPMATEAHVIPTVGPVADCIKGCTGSLTSLTPGYCLSICQAEFVVPRVHPHPHPNPHPHPHPHPH
        MNSK  +T     ML+IIAA+ A +I LLPM  EAH IPTVG +  CIK C  SL SL P YC  +C+AEF  PR H H H + H H    PH
Subjt:  MNSKAATTTTPRIMLLIIAAMVAASIALLPMATEAHVIPTVGPVADCIKGCTGSLTSLTPGYCLSICQAEFVVPRVHPHPHPNPHPHPHPHPH

TrEMBL top hitse value%identityAlignment
A0A5A7VAR8 Histidine-rich glycoprotein-like isoform X21.5e-0545.68Show/hide
Query:  IIAAMVAASIALLPMATEAHVIPTVGPVADCIKGCTGSLTSLTPGYCLSICQAEFVVPRVHPHPHPNPHPHPHPHPHPEAQ
        +I A ++  I  LPM  EA  IP VGP+A CI+GCT SL++LTPGYC++IC AE+       HP  NP    H   H + +
Subjt:  IIAAMVAASIALLPMATEAHVIPTVGPVADCIKGCTGSLTSLTPGYCLSICQAEFVVPRVHPHPHPNPHPHPHPHPHPEAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18535.1 tubulin-tyrosine ligases6.7e-0686.36Show/hide
Query:  PRVHPHPHPNPHPHPHPHPHPE
        P  HPHPHP+PHPHPHPHPHPE
Subjt:  PRVHPHPHPNPHPHPHPHPHPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAAAAGCAGCAACAACAACAACACCAAGAATAATGCTTTTGATCATCGCCGCGATGGTCGCTGCGAGCATCGCCCTGCTTCCGATGGCAACGGAAGCGCACGT
TATTCCGACCGTCGGTCCGGTCGCTGATTGCATCAAGGGCTGCACAGGGTCATTGACAAGTTTAACGCCTGGTTATTGCCTGAGTATATGTCAAGCTGAGTTCGTTGTAC
CAAGAGTACATCCTCATCCTCATCCTAACCCTCACCCTCATCCTCATCCTCATCCTCATCCCGAAGCTCAGGCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCAAAAGCAGCAACAACAACAACACCAAGAATAATGCTTTTGATCATCGCCGCGATGGTCGCTGCGAGCATCGCCCTGCTTCCGATGGCAACGGAAGCGCACGT
TATTCCGACCGTCGGTCCGGTCGCTGATTGCATCAAGGGCTGCACAGGGTCATTGACAAGTTTAACGCCTGGTTATTGCCTGAGTATATGTCAAGCTGAGTTCGTTGTAC
CAAGAGTACATCCTCATCCTCATCCTAACCCTCACCCTCATCCTCATCCTCATCCTCATCCCGAAGCTCAGGCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTGA
Protein sequenceShow/hide protein sequence
MNSKAATTTTPRIMLLIIAAMVAASIALLPMATEAHVIPTVGPVADCIKGCTGSLTSLTPGYCLSICQAEFVVPRVHPHPHPNPHPHPHPHPHPEAQAGSGSGSGSGSG