; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037912 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037912
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr2:10512356..10512829
RNA-Seq ExpressionLag0037912
SyntenyLag0037912
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064334.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]3.1e-6783.75Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG
        M DPLLT +FPMETMVPE SSS P++HYTVTLDLRTSIIFS SI+LFFLFLFHVLSGFLQWF+DVRR GGG  DVEAAMAEERR +RAEK  LPPTV+FG
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG

Query:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        SEKMVRRRS+EECAICLEEF+AGENCQALPEC+HFFHS+CI+VW  KKFTCPICR+CVAA
Subjt:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

XP_008453063.1 PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo]3.1e-6783.75Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG
        M DPLLT +FPMETMVPE SSS P++HYTVTLDLRTSIIFS SI+LFFLFLFHVLSGFLQWF+DVRR GGG  DVEAAMAEERR +RAEK  LPPTV+FG
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG

Query:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        SEKMVRRRS+EECAICLEEF+AGENCQALPEC+HFFHS+CI+VW  KKFTCPICR+CVAA
Subjt:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

XP_022936829.1 RING-H2 finger protein ATL39-like [Cucurbita moschata]2.3e-6580.25Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGGDVEAAMAEERRGRRAEKLPPTVRFGSEK
        MADPLLT +FPMETMV ES+S   +VHYTVTLDLRTS+IFS++I+LFFLFL+HVLSGFLQWF+  RR   GGDVEA M EERR RRAEK+P  VRFGSE+
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGGDVEAAMAEERRGRRAEKLPPTVRFGSEK

Query:  MVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        MVRRRS+EECAICLEEF+AGENCQALPECNHFFHSDCIDVW  KKFTCPICRHC+AA
Subjt:  MVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

XP_022976597.1 RING-H2 finger protein ATL39-like [Cucurbita maxima]7.7e-6681.53Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGGDVEAAMAEERRGRRAEKLPPTVRFGSEK
        MADPLLT +FPMETMV ES+S   IVHYTVTLDLRTSIIFS++I+LFFLFL+HVLSGFLQWF+  RR   GGDVEA M EERR RRAEK+P  VRFGSE+
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGGDVEAAMAEERRGRRAEKLPPTVRFGSEK

Query:  MVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        MVRRRS+EECAICLEEF+AGENCQALPECNHFFHSDCIDVW  KKFTCPICRHC+AA
Subjt:  MVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

XP_031740449.1 RING-H2 finger protein ATL39-like [Cucumis sativus]6.3e-6884.38Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG
        M DPLLT +FPMETMVPE S S P++HYTVTLD+RTSIIFS SI+LFFLFLFHVLSGFLQWF+DVRR GGGG DVEAAMAEERR +RAEK  LPPTVRFG
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG

Query:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        SEKMVRRRS+EECAICLEEF+ GENCQALPECNHFFHS+CIDVW  KKFTCPICR+CVAA
Subjt:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

TrEMBL top hitse value%identityAlignment
A0A0A0L062 RING-type domain-containing protein3.1e-6884.38Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG
        M DPLLT +FPMETMVPE S S P++HYTVTLD+RTSIIFS SI+LFFLFLFHVLSGFLQWF+DVRR GGGG DVEAAMAEERR +RAEK  LPPTVRFG
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG

Query:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        SEKMVRRRS+EECAICLEEF+ GENCQALPECNHFFHS+CIDVW  KKFTCPICR+CVAA
Subjt:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

A0A1S3BVC7 RING-H2 finger protein ATL39-like1.5e-6783.75Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG
        M DPLLT +FPMETMVPE SSS P++HYTVTLDLRTSIIFS SI+LFFLFLFHVLSGFLQWF+DVRR GGG  DVEAAMAEERR +RAEK  LPPTV+FG
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG

Query:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        SEKMVRRRS+EECAICLEEF+AGENCQALPEC+HFFHS+CI+VW  KKFTCPICR+CVAA
Subjt:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

A0A5A7VAT0 RING-H2 finger protein ATL39-like1.5e-6783.75Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG
        M DPLLT +FPMETMVPE SSS P++HYTVTLDLRTSIIFS SI+LFFLFLFHVLSGFLQWF+DVRR GGG  DVEAAMAEERR +RAEK  LPPTV+FG
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG

Query:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        SEKMVRRRS+EECAICLEEF+AGENCQALPEC+HFFHS+CI+VW  KKFTCPICR+CVAA
Subjt:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

A0A5D3D9M0 RING-H2 finger protein ATL39-like1.5e-6783.75Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG
        M DPLLT +FPMETMVPE SSS P++HYTVTLDLRTSIIFS SI+LFFLFLFHVLSGFLQWF+DVRR GGG  DVEAAMAEERR +RAEK  LPPTV+FG
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGG-DVEAAMAEERRGRRAEK--LPPTVRFG

Query:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        SEKMVRRRS+EECAICLEEF+AGENCQALPEC+HFFHS+CI+VW  KKFTCPICR+CVAA
Subjt:  SEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

A0A6J1IG67 RING-H2 finger protein ATL39-like3.8e-6681.53Show/hide
Query:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGGDVEAAMAEERRGRRAEKLPPTVRFGSEK
        MADPLLT +FPMETMV ES+S   IVHYTVTLDLRTSIIFS++I+LFFLFL+HVLSGFLQWF+  RR   GGDVEA M EERR RRAEK+P  VRFGSE+
Subjt:  MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGGDVEAAMAEERRGRRAEKLPPTVRFGSEK

Query:  MVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA
        MVRRRS+EECAICLEEF+AGENCQALPECNHFFHSDCIDVW  KKFTCPICRHC+AA
Subjt:  MVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL102.7e-1347.89Show/hide
Query:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        ++A ++ P V + S +M     DEEC ICL +FV+GE  + LP+CNH FH  CID WL++  TCP CR+C+
Subjt:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV

Q6NML0 E3 ubiquitin-protein ligase ATL763.5e-1347.89Show/hide
Query:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        ++A ++ P V + S +M      EEC ICL +FV+GE  + LP+CNH FH  CID WL+   TCP CRHC+
Subjt:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV

Q6NQG7 RING-H2 finger protein ATL788.7e-1243.02Show/hide
Query:  GGGDVEAAMAEERRGRRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        GG +    +      R+A K   TV + +E +     D ECAICL EFVA E  + LP C+H FH  CID WL    +CP CRHC+
Subjt:  GGGDVEAAMAEERRGRRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV

Q94BY6 RING-H2 finger protein ATL751.0e-1246.48Show/hide
Query:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        ++A ++ P V + S +M      EEC ICL +FV+GE  + LP+C+H FH  CID WL++  TCP CRHC+
Subjt:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV

Q9LS99 RING-H2 finger protein ATL771.2e-1349.3Show/hide
Query:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        ++A K+ P V + S ++      EEC ICL +FVAGE  + LP+CNH FH  CID WL +  TCP CRHC+
Subjt:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV

Arabidopsis top hitse value%identityAlignment
AT1G49200.1 RING/U-box superfamily protein7.3e-1446.48Show/hide
Query:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        ++A ++ P V + S +M      EEC ICL +FV+GE  + LP+C+H FH  CID WL++  TCP CRHC+
Subjt:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV

AT1G49210.1 RING/U-box superfamily protein2.5e-1447.89Show/hide
Query:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        ++A ++ P V + S +M      EEC ICL +FV+GE  + LP+CNH FH  CID WL+   TCP CRHC+
Subjt:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV

AT1G49220.1 RING/U-box superfamily protein1.9e-1447.89Show/hide
Query:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        ++A ++ P V + S +M     DEEC ICL +FV+GE  + LP+CNH FH  CID WL++  TCP CR+C+
Subjt:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV

AT1G49230.1 RING/U-box superfamily protein6.2e-1343.02Show/hide
Query:  GGGDVEAAMAEERRGRRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        GG +    +      R+A K   TV + +E +     D ECAICL EFVA E  + LP C+H FH  CID WL    +CP CRHC+
Subjt:  GGGDVEAAMAEERRGRRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV

AT3G18773.1 RING/U-box superfamily protein8.7e-1549.3Show/hide
Query:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV
        ++A K+ P V + S ++      EEC ICL +FVAGE  + LP+CNH FH  CID WL +  TCP CRHC+
Subjt:  RRAEKLPPTVRFGSEKMVRRRSDEECAICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATCCATTGCTGACATTCGTCTTCCCGATGGAAACGATGGTCCCGGAGTCGTCGTCGTCTGCTCCAATCGTCCACTACACCGTAACCCTAGACCTCCGGACGTC
CATAATCTTCTCCCTGTCCATAGTCCTCTTCTTCCTCTTCCTGTTCCACGTCCTGAGCGGGTTCCTCCAGTGGTTCATGGACGTCCGGCGCGGGGGAGGCGGCGGGGACG
TGGAGGCGGCAATGGCGGAGGAGAGGCGGGGGCGGAGGGCGGAGAAGCTGCCGCCGACGGTGAGGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGCGATGAGGAATGT
GCGATCTGTTTGGAGGAGTTCGTGGCGGGGGAGAACTGCCAGGCGTTGCCGGAATGCAACCATTTTTTTCATTCGGATTGCATTGATGTTTGGTTGAGAAAGAAATTCAC
TTGCCCTATCTGTCGTCATTGTGTTGCAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATCCATTGCTGACATTCGTCTTCCCGATGGAAACGATGGTCCCGGAGTCGTCGTCGTCTGCTCCAATCGTCCACTACACCGTAACCCTAGACCTCCGGACGTC
CATAATCTTCTCCCTGTCCATAGTCCTCTTCTTCCTCTTCCTGTTCCACGTCCTGAGCGGGTTCCTCCAGTGGTTCATGGACGTCCGGCGCGGGGGAGGCGGCGGGGACG
TGGAGGCGGCAATGGCGGAGGAGAGGCGGGGGCGGAGGGCGGAGAAGCTGCCGCCGACGGTGAGGTTTGGGAGCGAGAAAATGGTGAGGAGGAGGAGCGATGAGGAATGT
GCGATCTGTTTGGAGGAGTTCGTGGCGGGGGAGAACTGCCAGGCGTTGCCGGAATGCAACCATTTTTTTCATTCGGATTGCATTGATGTTTGGTTGAGAAAGAAATTCAC
TTGCCCTATCTGTCGTCATTGTGTTGCAGCTTAG
Protein sequenceShow/hide protein sequence
MADPLLTFVFPMETMVPESSSSAPIVHYTVTLDLRTSIIFSLSIVLFFLFLFHVLSGFLQWFMDVRRGGGGGDVEAAMAEERRGRRAEKLPPTVRFGSEKMVRRRSDEEC
AICLEEFVAGENCQALPECNHFFHSDCIDVWLRKKFTCPICRHCVAA