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Lag0037931 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037931
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionstem-specific protein TSJT1-like
Genome locationchr2:10734979..10738686
RNA-Seq ExpressionLag0037931
SyntenyLag0037931
Gene Ontology termsNA
InterPro domainsIPR024286 - Domain of unknown function DUF3700


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022959386.1 stem-specific protein TSJT1-like isoform X1 [Cucurbita moschata]1.4e-1168.25Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISK------PRDRFSLNSEIR
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQGISK       R+R   N + R
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISK------PRDRFSLNSEIR
XP_022959387.1 stem-specific protein TSJT1-like isoform X2 [Cucurbita moschata]1.0e-0985.71Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQG
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
XP_023006443.1 stem-specific protein TSJT1-like isoform X1 [Cucurbita maxima]1.0e-0985.71Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQG
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
XP_023006444.1 stem-specific protein TSJT1-like isoform X2 [Cucurbita maxima]5.5e-1166.67Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISK------PRDRFSLNSEIR
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQG SK       R+R   N + R
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISK------PRDRFSLNSEIR
XP_023548563.1 stem-specific protein TSJT1-like [Cucurbita pepo subsp. pepo]1.0e-0985.71Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQG
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
TrEMBL top hitse value%identityAlignment
A0A6J1CAR8 stem-specific protein TSJT1-like5.0e-1085.71Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQG
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
A0A6J1H4Q4 stem-specific protein TSJT1-like isoform X16.9e-1268.25Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISK------PRDRFSLNSEIR
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQGISK       R+R   N + R
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISK------PRDRFSLNSEIR
A0A6J1L268 stem-specific protein TSJT1-like isoform X22.6e-1166.67Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISK------PRDRFSLNSEIR
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQG SK       R+R   N + R
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISK------PRDRFSLNSEIR
A0A6J1L4X9 stem-specific protein TSJT1-like isoform X15.0e-1085.71Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQG
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
A0A7N0VBQ6 DUF3700 domain-containing protein5.0e-1085.71Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
        +DQFGKVPLYWGIT     AFADDAGLLKGACGKSLASFPQG
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19140.1 Aluminium induced protein with YGL and LRDR motifs1.2e-1178.57Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
        +DQ GKVPLYWGIT     AFADD  LLKGACGKSLASFPQG
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQG
AT5G19140.2 Aluminium induced protein with YGL and LRDR motifs1.4e-0443.14Show/hide
Query:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISKPRDRFS
        +DQ GKVPLYWGIT     AFADD  LLKG    +     +    P+++ +
Subjt:  TDQFGKVPLYWGIT-----AFADDAGLLKGACGKSLASFPQGISKPRDRFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCTTAGAAACTCATGTATCAGGAGGGCATCCAAATCTTCTTAGATGCCTCTCGTGTGGGCATCCTAGGATGTCCGGGCATCCCGAGATGCCTAGGCATCTTAC
ATCACCACAAAACAAGCGGGGTAATCCAGATACCCATTCCATGGGAATCTTGGATTACTGCGAAACAAACGACCCCTTAGATCTAACTGATCAGTTCGGGAAAGTGCCTC
TGTATTGGGGAATCACCGCGTTCGCCGATGATGCTGGACTCCTCAAAGGCGCTTGTGGAAAATCACTCGCTTCGTTTCCTCAAGGTATTTCGAAACCTAGGGATCGGTTT
TCGTTGAATTCGGAAATTAGGGCACGGATTGATTCTGGATTGTTTGTTTGTTTCGATTTCAGGCTGTTTCTTCTCCACCGCCACCGCCGCCGATTTCCTCTTACCCAGAT
GCTACAGACCAACCAGATTCCCGCTGCCGCTGCCTTCCTCTCCTTCATCTTCTCTTCTTTCCCTCTCCTTCGTCATCTCTTCTCTCTCTCAACCCTCAAAACTCTGTTTT
CTTCTCGTTCAGCTCCGGCGGGTGCTTTGTTTCTTAAAGATGAAAACGAAACTTGGGGGCTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCTTAGAAACTCATGTATCAGGAGGGCATCCAAATCTTCTTAGATGCCTCTCGTGTGGGCATCCTAGGATGTCCGGGCATCCCGAGATGCCTAGGCATCTTAC
ATCACCACAAAACAAGCGGGGTAATCCAGATACCCATTCCATGGGAATCTTGGATTACTGCGAAACAAACGACCCCTTAGATCTAACTGATCAGTTCGGGAAAGTGCCTC
TGTATTGGGGAATCACCGCGTTCGCCGATGATGCTGGACTCCTCAAAGGCGCTTGTGGAAAATCACTCGCTTCGTTTCCTCAAGGTATTTCGAAACCTAGGGATCGGTTT
TCGTTGAATTCGGAAATTAGGGCACGGATTGATTCTGGATTGTTTGTTTGTTTCGATTTCAGGCTGTTTCTTCTCCACCGCCACCGCCGCCGATTTCCTCTTACCCAGAT
GCTACAGACCAACCAGATTCCCGCTGCCGCTGCCTTCCTCTCCTTCATCTTCTCTTCTTTCCCTCTCCTTCGTCATCTCTTCTCTCTCTCAACCCTCAAAACTCTGTTTT
CTTCTCGTTCAGCTCCGGCGGGTGCTTTGTTTCTTAAAGATGAAAACGAAACTTGGGGGCTGATTTGA
Protein sequenceShow/hide protein sequence
MGILETHVSGGHPNLLRCLSCGHPRMSGHPEMPRHLTSPQNKRGNPDTHSMGILDYCETNDPLDLTDQFGKVPLYWGITAFADDAGLLKGACGKSLASFPQGISKPRDRF
SLNSEIRARIDSGLFVCFDFRLFLLHRHRRRFPLTQMLQTNQIPAAAAFLSFIFSSFPLLRHLFSLSTLKTLFSSRSAPAGALFLKDENETWGLI