; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0037994 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0037994
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionphotosynthetic NDH subunit of lumenal location 3, chloroplastic
Genome locationchr2:11412162..11413016
RNA-Seq ExpressionLag0037994
SyntenyLag0037994
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009344 - nitrite reductase complex [NAD(P)H] (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607822.1 Photosynthetic NDH subunit of lumenal location 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.6e-10693.12Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNGVSEKFSAIPKL KLQKT KR KITG LEKQ +VSSH+ISLTRRLALTSL SVALFGNA VEI SANEYWLDGPLP+PSVYNNIANEKT TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIA IGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

KAG7015220.1 Photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.3e-10793.58Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNGVSEKFSAIPKL KLQKT KR KITG LEKQ +VSSH+ISLTRRLALTSL SVALFGNA VEI SANEYWLDGPLP+PSVYNNIANEKT TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_022139520.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Momordica charantia]1.3e-10693.12Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNGVS+KFSAIPKLPKLQ   KR+KI GFL KQT+VSSH  S TRRLALTS+VSVALFGNASVEI SANEYWLDGPLPVPSVYNNIANEKT TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_022940191.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita moschata]5.6e-10793.12Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNGVSEKFSAIPKL KLQKT KR KI G LEKQ +VSSH++SLTRRLALTSL SVALFGNASVEI SANEYWLDGPLP+PSVYNNIANEKT TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_022981605.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita maxima]4.8e-10692.66Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNGVSEKFSAIPKL KL+KT KR KI G LEKQ +VSSH+ISLTRRLALTSL SVALFGNASVEI SANEYWLDGPLP+PSVYNNIANEKT TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEKQPLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

TrEMBL top hitse value%identityAlignment
A0A0A0L7N1 Uncharacterized protein5.9e-10290.83Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNG   KFSAIP LPKLQ  HKR+KITGFL+KQT VSSHQISLTRRLALTSLVSVALFGNAS EI SANEYWLDGPLPVPSV NNI NE+T TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAAD EKQPL DLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A5A7TX10 Photosynthetic NDH subunit of lumenal location 31.7e-10190.37Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNG   KFSAIP LPKLQ  HK++KITGFL+KQT VSSHQISLTRRLALTSLVSVALFGNAS EI SANEYWLDGPLPVPSV NNIANE+T TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAAD EKQPL DLANRLFDNFEKLE+AAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A6J1CCI9 photosynthetic NDH subunit of lumenal location 3, chloroplastic6.1e-10793.12Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNGVS+KFSAIPKLPKLQ   KR+KI GFL KQT+VSSH  S TRRLALTS+VSVALFGNASVEI SANEYWLDGPLPVPSVYNNIANEKT TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A6J1FHS2 photosynthetic NDH subunit of lumenal location 3, chloroplastic2.7e-10793.12Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNGVSEKFSAIPKL KLQKT KR KI G LEKQ +VSSH++SLTRRLALTSL SVALFGNASVEI SANEYWLDGPLP+PSVYNNIANEKT TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A6J1IZZ5 photosynthetic NDH subunit of lumenal location 3, chloroplastic2.3e-10692.66Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR
        MARLANLNGVSEKFSAIPKL KL+KT KR KI G LEKQ +VSSH+ISLTRRLALTSL SVALFGNASVEI SANEYWLDGPLP+PSVYNNIANEKT TR
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEKQPLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

SwissProt top hitse value%identityAlignment
P83646 Oxygen-evolving enhancer protein 3, chloroplastic1.3e-1029.48Show/hide
Query:  TRRLALTSLVSVALFGNASVE--IVSANEYWLDGPLPVPS--VYNNIANEKTRTRSF-LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVR
        T R A+  LV+  + G A  +  +  A +    GP P PS  +   + +++ R     L+   Y+  +       R K  A D++ +  LI K    +VR
Subjt:  TRRLALTSLVSVALFGNASVE--IVSANEYWLDGPLPVPS--VYNNIANEKTRTRSF-LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVR

Query:  KYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
          LRL+++++ YD   VI++    EK+ L DL  +LF   + L+ AAK K+  E E YY  T   L +V+ ++
Subjt:  KYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

Q0D5P8 Oxygen-evolving enhancer protein 3, chloroplastic1.3e-1029.48Show/hide
Query:  TRRLALTSLVSVALFGNASVE--IVSANEYWLDGPLPVPS--VYNNIANEKTRTRSF-LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVR
        T R A+  LV+  + G A  +  +  A +    GP P PS  +   + +++ R     L+   Y+  +       R K  A D++ +  LI K    +VR
Subjt:  TRRLALTSLVSVALFGNASVE--IVSANEYWLDGPLPVPS--VYNNIANEKTRTRSF-LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVR

Query:  KYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
          LRL+++++ YD   VI++    EK+ L DL  +LF   + L+ AAK K+  E E YY  T   L +V+ ++
Subjt:  KYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

Q41932 Oxygen-evolving enhancer protein 3-2, chloroplastic2.4e-1230.59Show/hide
Query:  RLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKTRTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYL
        R ++  LV+  L G + V+ V A    +  G  P+PS      +   + R F   LK   YI  +       R K  A +++ +   I K    YV+  L
Subjt:  RLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKTRTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYL

Query:  RLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        RL+++++ YD + VISA    EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L  V+ ++
Subjt:  RLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

Q9SGH4 Photosynthetic NDH subunit of lumenal location 3, chloroplastic2.3e-6658.3Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQ--VSSHQISLTRRLALTSLVSVAL---FGNASVEIVSANEYWLDGPLPVPSVYNNIANE
        MA   +LN ++    ++PKLP+ +KT K    +GF  ++T+       + +TRR+ L   VS+ L    G  +V +   N +W+DGPLP+P +YNNI NE
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQ--VSSHQISLTRRLALTSLVSVAL---FGNASVEIVSANEYWLDGPLPVPSVYNNIANE

Query:  KTRTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKN
        KT TR+F+K G+Y+A+IGT+GR YR+K+ AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +KQPLTDLANRLFDNFEKLEDAAK KN
Subjt:  KTRTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKN

Query:  LSETESYYQQTTPILQEVMDRMA
        L+ETES Y+ T  +LQEVM RMA
Subjt:  LSETESYYQQTTPILQEVMDRMA

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic3.1e-1531.49Show/hide
Query:  VSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKT-RTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIG
        V + Q   T R ++  LV+  L G + V+ V A+   +  GP P PS       + + + R F   LK   Y+  +       R K  A D++ +  LI 
Subjt:  VSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKT-RTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIG

Query:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        +    YV+  LR K++++ YD + +IS+    EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Subjt:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

Arabidopsis top hitse value%identityAlignment
AT3G01440.1 PsbQ-like 11.6e-6758.3Show/hide
Query:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQ--VSSHQISLTRRLALTSLVSVAL---FGNASVEIVSANEYWLDGPLPVPSVYNNIANE
        MA   +LN ++    ++PKLP+ +KT K    +GF  ++T+       + +TRR+ L   VS+ L    G  +V +   N +W+DGPLP+P +YNNI NE
Subjt:  MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQ--VSSHQISLTRRLALTSLVSVAL---FGNASVEIVSANEYWLDGPLPVPSVYNNIANE

Query:  KTRTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKN
        KT TR+F+K G+Y+A+IGT+GR YR+K+ AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +KQPLTDLANRLFDNFEKLEDAAK KN
Subjt:  KTRTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKN

Query:  LSETESYYQQTTPILQEVMDRMA
        L+ETES Y+ T  +LQEVM RMA
Subjt:  LSETESYYQQTTPILQEVMDRMA

AT4G05180.1 photosystem II subunit Q-21.7e-1330.59Show/hide
Query:  RLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKTRTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYL
        R ++  LV+  L G + V+ V A    +  G  P+PS      +   + R F   LK   YI  +       R K  A +++ +   I K    YV+  L
Subjt:  RLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKTRTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYL

Query:  RLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        RL+++++ YD + VISA    EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L  V+ ++
Subjt:  RLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

AT4G21280.1 photosystem II subunit QA4.4e-1731.67Show/hide
Query:  VSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKTRTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGK
        V + Q   T R ++  LV+  L G + V+ V A+   +  GP P PS      +   + R F   LK   Y+  +       R K  A D++ +  LI +
Subjt:  VSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKTRTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGK

Query:  DTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
            YV+  LR K++++ YD + +IS+    EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Subjt:  DTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM

AT4G21280.2 photosystem II subunit QA2.2e-1631.49Show/hide
Query:  VSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKT-RTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIG
        V + Q   T R ++  LV+  L G + V+ V A+   +  GP P PS       + + + R F   LK   Y+  +       R K  A D++ +  LI 
Subjt:  VSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLD-GPLPVPSVYNNIANEKT-RTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIG

Query:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM
        +    YV+  LR K++++ YD + +IS+    EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ ++
Subjt:  KDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTCTTGCAAACTTAAATGGCGTCTCAGAGAAATTCTCCGCCATTCCCAAGCTTCCAAAGCTTCAAAAGACTCACAAGAGAATGAAAATAACTGGGTTTCTCGA
GAAACAAACACAAGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTCTAACCAGTCTTGTCTCTGTTGCCCTCTTTGGCAATGCATCGGTCGAGATCGTTTCCG
CTAACGAGTACTGGCTCGATGGCCCTCTGCCCGTCCCTTCCGTTTACAATAATATTGCGAACGAGAAAACGAGGACTCGGTCGTTTCTGAAGACGGGGATTTACATAGCT
AACATAGGGACAGAAGGGAGAAAGTACAGATTGAAGAGATATGCCTTTGATCTTCTGGCTATGGCGGATTTGATTGGGAAGGATACTTTGAATTATGTAAGGAAGTATCT
TCGACTCAAATCGACGTTCATGTACTACGATTTCGACAATGTTATCTCGGCAGCAGCGGACGGGGAGAAGCAGCCTCTCACTGATTTAGCTAACAGATTGTTCGACAACT
TCGAAAAGCTTGAAGATGCAGCAAAGCAGAAGAATCTGAGTGAAACTGAATCTTACTATCAACAGACAACACCTATACTTCAAGAAGTCATGGATAGAATGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGTCTTGCAAACTTAAATGGCGTCTCAGAGAAATTCTCCGCCATTCCCAAGCTTCCAAAGCTTCAAAAGACTCACAAGAGAATGAAAATAACTGGGTTTCTCGA
GAAACAAACACAAGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTCTAACCAGTCTTGTCTCTGTTGCCCTCTTTGGCAATGCATCGGTCGAGATCGTTTCCG
CTAACGAGTACTGGCTCGATGGCCCTCTGCCCGTCCCTTCCGTTTACAATAATATTGCGAACGAGAAAACGAGGACTCGGTCGTTTCTGAAGACGGGGATTTACATAGCT
AACATAGGGACAGAAGGGAGAAAGTACAGATTGAAGAGATATGCCTTTGATCTTCTGGCTATGGCGGATTTGATTGGGAAGGATACTTTGAATTATGTAAGGAAGTATCT
TCGACTCAAATCGACGTTCATGTACTACGATTTCGACAATGTTATCTCGGCAGCAGCGGACGGGGAGAAGCAGCCTCTCACTGATTTAGCTAACAGATTGTTCGACAACT
TCGAAAAGCTTGAAGATGCAGCAAAGCAGAAGAATCTGAGTGAAACTGAATCTTACTATCAACAGACAACACCTATACTTCAAGAAGTCATGGATAGAATGGCATAA
Protein sequenceShow/hide protein sequence
MARLANLNGVSEKFSAIPKLPKLQKTHKRMKITGFLEKQTQVSSHQISLTRRLALTSLVSVALFGNASVEIVSANEYWLDGPLPVPSVYNNIANEKTRTRSFLKTGIYIA
NIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAADGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA