; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038032 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038032
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCRS2-associated factor 2, mitochondrial
Genome locationchr2:11765807..11767325
RNA-Seq ExpressionLag0038032
SyntenyLag0038032
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily
IPR044599 - CRS2-associated factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592037.1 CRS2-associated factor 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.1e-12070.25Show/hide
Query:  MTWLPSPRPTQTSPYSASSLLYISAKLQ---LHYTLVELPEMAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHD
        MTWLPSP   +T+ Y      + S  LQ      TLVE  +MAIHFRTRI+FPDH NQK SGYFL I RF SKSLSE+ YDPPFSP SKLQK K KK  D
Subjt:  MTWLPSPRPTQTSPYSASSLLYISAKLQ---LHYTLVELPEMAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHD

Query:  GNSNSNKNPTLPLQS------------------------IAQILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNC
        GNSNS KN TLPL S                          +     PG    +      P+EVEVKINEVLEER+RILGDPL+EEEVAELVEQYRHNNC
Subjt:  GNSNSNKNPTLPLQS------------------------IAQILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNC

Query:  SRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVA
        SRQINLGKGGVTHNMLDDIHNHW+RAEAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYRHIN++LLYRGRNY+P NRP IPLMLWKPYAPIYPKLVKNVA
Subjt:  SRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVA

Query:  DGLSFEETKEMRSRGLNSPPLMKLSK
        DGLSFEETKEMR RGLNSPPLMKL++
Subjt:  DGLSFEETKEMRSRGLNSPPLMKLSK

XP_004151957.1 CRS2-associated factor 2, mitochondrial [Cucumis sativus]3.1e-11675.78Show/hide
Query:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNK--KTHDGNSNSNKNPTLPLQSIAQILTVWP---------------
        MAIHFRTRIRFPDH N KPSGYF  I RFISKSLSESTYDPPFSP SKLQK K K  K H GNSNSN+NPTLPL+S       +                
Subjt:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNK--KTHDGNSNSNKNPTLPLQSIAQILTVWP---------------

Query:  -------GPTRPEMDRNF----GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP
               GP R  +DR +     P+ VEV INEVLEER+RILGDPL +EEVAELVEQYRH++CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP
Subjt:  -------GPTRPEMDRNF----GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP

Query:  TLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        TLDMDNICFHLEDKSGGKIIYRHIN++LLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVAD LSF+ETKEMRSRGLNSPPLMKL++
Subjt:  TLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

XP_022139762.1 CRS2-associated factor 2, mitochondrial [Momordica charantia]1.4e-11675.97Show/hide
Query:  IHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IAQI
        IHFRTRIRFP+H NQKP GYFLLI RFISKS +E  YDPPFSPASKL+K KNKKTH+GNS+SNKNPTLPL S                          + 
Subjt:  IHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IAQI

Query:  LTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
            PG    +      P  +EVKI EV EER RILGDPL+EEEVAELVE+YRH+NCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
Subjt:  LTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN

Query:  ICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        ICFHLEDKSGGKIIYRHINV+LLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKL++
Subjt:  ICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

XP_023535436.1 CRS2-associated factor 2, mitochondrial [Cucurbita pepo subsp. pepo]4.1e-11675.44Show/hide
Query:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IA
        MAIHFRTRIRFPDH NQK SGYFLLI RF SKSLSE+ YDPPFSP SKLQK K KK  DGNSNS KN TLPL S                          
Subjt:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IA

Query:  QILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM
        +     PG    +      P+EVEVKINEVLEER+RILGDPL+EEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHW+R EAVRIKCLGVPTLDM
Subjt:  QILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM

Query:  DNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        +NICFHLEDKSGGKIIYRHIN++LLYRGRNYDP+NRP IPLMLWKPYAPIYPKLVKNVADGLSFEETKEMR RGLNSPPLMKL++
Subjt:  DNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

XP_038900170.1 CRS2-associated factor 2, mitochondrial [Benincasa hispida]1.2e-11875.79Show/hide
Query:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IA
        MA HFRTRIRFPDH N+KPSGYF  I RFISKSLSES+YDPPF+P SKL+K K KKTHDGNSNSN+ PTLPLQS                          
Subjt:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IA

Query:  QILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM
        +     PG    +      P  VEVKINEVLEER+RILGDPL+EEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHW+RAEAVRIKCLGVPTLDM
Subjt:  QILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM

Query:  DNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        DNICFHLEDKSGGKIIYRHIN++LLYRGRNYDPKNRP IPLMLWKPYAPIYPKLVKNVADGLSF+ETKEMR+RGLNSPPLMKL++
Subjt:  DNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

TrEMBL top hitse value%identityAlignment
A0A0A0LD46 Uncharacterized protein1.5e-11675.78Show/hide
Query:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNK--KTHDGNSNSNKNPTLPLQSIAQILTVWP---------------
        MAIHFRTRIRFPDH N KPSGYF  I RFISKSLSESTYDPPFSP SKLQK K K  K H GNSNSN+NPTLPL+S       +                
Subjt:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNK--KTHDGNSNSNKNPTLPLQSIAQILTVWP---------------

Query:  -------GPTRPEMDRNF----GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP
               GP R  +DR +     P+ VEV INEVLEER+RILGDPL +EEVAELVEQYRH++CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP
Subjt:  -------GPTRPEMDRNF----GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVP

Query:  TLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        TLDMDNICFHLEDKSGGKIIYRHIN++LLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVAD LSF+ETKEMRSRGLNSPPLMKL++
Subjt:  TLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

A0A1S3BYZ9 CRS2-associated factor 2, mitochondrial3.4e-11675.69Show/hide
Query:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQK-PKNKKTHDGNSNSNKNPTLPLQSIAQILTVWP----------------
        MAIHFRTRIRFPD  NQKPSGYF  I RFISKSLSESTYDPPFSP SKLQK  K KK H GNSNSN+NPTLPL+S       +                 
Subjt:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQK-PKNKKTHDGNSNSNKNPTLPLQSIAQILTVWP----------------

Query:  ------GPTRPEMDRNF----GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPT
              GP R  +DR +     P+ VEV INEVLEER+RILGDPL++EEVAELVEQYRH++CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPT
Subjt:  ------GPTRPEMDRNF----GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPT

Query:  LDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        LDM+NICFHLEDKSGGKIIYR+IN++LLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSF+ETKEMRSRGLNSPPLMKL++
Subjt:  LDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

A0A5D3BGH7 CRS2-associated factor 23.4e-11675.69Show/hide
Query:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQK-PKNKKTHDGNSNSNKNPTLPLQSIAQILTVWP----------------
        MAIHFRTRIRFPD  NQKPSGYF  I RFISKSLSESTYDPPFSP SKLQK  K KK H GNSNSN+NPTLPL+S       +                 
Subjt:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQK-PKNKKTHDGNSNSNKNPTLPLQSIAQILTVWP----------------

Query:  ------GPTRPEMDRNF----GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPT
              GP R  +DR +     P+ VEV INEVLEER+RILGDPL++EEVAELVEQYRH++CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPT
Subjt:  ------GPTRPEMDRNF----GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPT

Query:  LDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        LDM+NICFHLEDKSGGKIIYR+IN++LLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSF+ETKEMRSRGLNSPPLMKL++
Subjt:  LDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

A0A6J1CEV8 CRS2-associated factor 2, mitochondrial6.8e-11775.97Show/hide
Query:  IHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IAQI
        IHFRTRIRFP+H NQKP GYFLLI RFISKS +E  YDPPFSPASKL+K KNKKTH+GNS+SNKNPTLPL S                          + 
Subjt:  IHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IAQI

Query:  LTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
            PG    +      P  +EVKI EV EER RILGDPL+EEEVAELVE+YRH+NCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
Subjt:  LTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN

Query:  ICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        ICFHLEDKSGGKIIYRHINV+LLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKL++
Subjt:  ICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

A0A6J1IH58 CRS2-associated factor 2, mitochondrial3.4e-11675.44Show/hide
Query:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IA
        MAIH RTRIRFPDH NQK SGYFL I RF SKSLSE  YDPPFSP SKLQK K KK  DGNSNS KNPTLPL S                          
Subjt:  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS------------------------IA

Query:  QILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM
        +     PG    +      P+EVEVKINEVLEER+RILGDPL+EEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHW+RAEAVRIKCLGVPTLDM
Subjt:  QILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM

Query:  DNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        +NICFHLEDKSGGKIIYRHIN++LLYRGRNYDP+NRP IPLMLWKPYAPIYPKLVKNVADGLSFEETKEMR RGLNSPPLMKL++
Subjt:  DNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

SwissProt top hitse value%identityAlignment
Q0J7J7 CRS2-associated factor 2, mitochondrial1.2e-7380.92Show/hide
Query:  RRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDP
        R  +LG+PL EEEVA+LVE+YRH++CSRQINLGKGGVTHNM+DDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDK+GGK+IYR+IN+++LYRGRNYDP
Subjt:  RRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDP

Query:  KNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        K RP IPLMLWKP APIYP+LV+NVADGL+FE+TKE+R+ GLNS PLMKL++
Subjt:  KNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

Q6Z4U2 CRS2-associated factor 1, mitochondrial6.7e-5361.44Show/hide
Query:  ERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYD
        ER R+LG+PLT  E A LV + + +   +QINLG+ G+THNML+DIHNHWK  EAVR+KCLGVPT+DM N+C  LEDK+GG II+RH   ++LYRGR+Y+
Subjt:  ERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYD

Query:  PKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        PK RP IPLMLWKP  P+YP+L+K   +GL+ EETKEMR +GL  P L KL+K
Subjt:  PKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

Q84N48 CRS2-associated factor 2, chloroplastic1.6e-4655.26Show/hide
Query:  RRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDP
        R  +LG+PLT  EV  LV+ +  +N  RQ+N+G+ G+THNML+ IH HW+R E  +++C GVPT+DM N+C+HLE+KSGGK+I+R   VV LYRGR+YDP
Subjt:  RRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDP

Query:  KNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        K RP  PLMLWKP  P+YPKL+K   DG + EE  EMR +G +  P+ KL+K
Subjt:  KNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

Q8VYD9 CRS2-associated factor 1, mitochondrial2.5e-5260Show/hide
Query:  LEERRR-----ILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLL
        LEE+RR     I G  LTE E   LVE  + N   RQ+NLG+ G+THNML+D++NHWK AEAVR+KCLGVPTLDM N+ FHLEDK+ G+++ +H   ++L
Subjt:  LEERRR-----ILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLL

Query:  YRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        YRGRNYDPK RP IPLMLWKP+ P+YP+L+K   DGLS +ETK MR +GL  P L KL+K
Subjt:  YRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

Q9FFU1 CRS2-associated factor 2, mitochondrial3.8e-8054.18Show/hide
Query:  QKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQSIAQILTVWP-------GPTRPEMD----------RNFGPTEV
        ++P   FL +    ++ +S   YDPPFSP SK  KP  +K        +++  L       +++  P         T PE++            FGP  +
Subjt:  QKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQSIAQILTVWP-------GPTRPEMD----------RNFGPTEV

Query:  -------------EVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDK
                     E+  ++ +EER R+LG+ LTE+EV EL+E+YRH++C+RQINLGKGGVTHNM+DDIHNHWK+AEAVRIKCLGVPTLDMDNICFHLE+K
Subjt:  -------------EVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDK

Query:  SGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        SGGKI+YR+IN+++LYRGRNYDPK+RP IPLMLWKP+ PIYP+LVKNVADGL FEETKEMR+RGL+SP LMKL++
Subjt:  SGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

Arabidopsis top hitse value%identityAlignment
AT1G23400.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein2.2e-4351.97Show/hide
Query:  RRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDP
        R  +LG+PL   E   L++ + H+N  RQ+NLG+ G THNML+ IH+HWKR    +++C GVPT+DM+N+C  LE+K+GG+II+R   VV L+RGRNY+ 
Subjt:  RRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDP

Query:  KNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        + RP  PLMLWKP AP+YPKL++ V +GL+ EE  E R +G +  P+ KLSK
Subjt:  KNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

AT2G20020.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein3.4e-4449.16Show/hide
Query:  PGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFH
        PGP RP      GP  V  K          ILG+PLT+EEV ELV        +RQ+N+G+ G+THNML++IH+ WKR    +IKC GV T+DMDN+C  
Subjt:  PGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFH

Query:  LEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        LE+K GGK+IYR   V+ L+RGRNY+ + RP  PLMLWKP AP+YP+L++ V +GL+ +E   MR +G    P+ KL K
Subjt:  LEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

AT4G31010.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein1.8e-5360Show/hide
Query:  LEERRR-----ILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLL
        LEE+RR     I G  LTE E   LVE  + N   RQ+NLG+ G+THNML+D++NHWK AEAVR+KCLGVPTLDM N+ FHLEDK+ G+++ +H   ++L
Subjt:  LEERRR-----ILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLL

Query:  YRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        YRGRNYDPK RP IPLMLWKP+ P+YP+L+K   DGLS +ETK MR +GL  P L KL+K
Subjt:  YRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

AT4G31010.2 RNA-binding CRS1 / YhbY (CRM) domain-containing protein6.9e-5360.13Show/hide
Query:  LEERRR-----ILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLL
        LEE+RR     I G  LTE E   LVE  + N   RQ+NLG+ G+THNML+D++NHWK AEAVR+KCLGVPTLDM N+ FHLEDK+ G+++ +H   ++L
Subjt:  LEERRR-----ILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLL

Query:  YRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKL
        YRGRNYDPK RP IPLMLWKP+ P+YP+L+K   DGLS +ETK MR +GL  P L KL
Subjt:  YRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKL

AT5G54890.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein2.7e-8154.18Show/hide
Query:  QKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQSIAQILTVWP-------GPTRPEMD----------RNFGPTEV
        ++P   FL +    ++ +S   YDPPFSP SK  KP  +K        +++  L       +++  P         T PE++            FGP  +
Subjt:  QKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQSIAQILTVWP-------GPTRPEMD----------RNFGPTEV

Query:  -------------EVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDK
                     E+  ++ +EER R+LG+ LTE+EV EL+E+YRH++C+RQINLGKGGVTHNM+DDIHNHWK+AEAVRIKCLGVPTLDMDNICFHLE+K
Subjt:  -------------EVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDK

Query:  SGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK
        SGGKI+YR+IN+++LYRGRNYDPK+RP IPLMLWKP+ PIYP+LVKNVADGL FEETKEMR+RGL+SP LMKL++
Subjt:  SGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTGGTTACCCTCGCCTCGCCCCACTCAAACGTCGCCGTATAGCGCTTCTTCTCTTCTCTACATCTCTGCAAAACTGCAACTTCATTACACCCTCGTCGAGCTGCC
GGAGATGGCGATTCATTTCCGAACACGAATCAGATTTCCAGATCACTGGAACCAGAAACCCAGTGGCTATTTCCTCTTGATCTACCGATTCATCTCCAAATCTCTGTCTG
AAAGCACCTACGATCCTCCATTTTCGCCTGCTTCCAAGCTCCAAAAACCGAAGAACAAGAAAACCCACGATGGAAATTCGAATTCAAACAAAAACCCCACTCTCCCTCTC
CAATCAATCGCCCAAATTCTCACCGTTTGGCCCGGGCCGACTCGACCGGAAATGGACCGGAACTTCGGCCCCACGGAGGTGGAGGTGAAGATAAACGAAGTGTTAGAGGA
GAGGAGACGGATTCTTGGAGACCCATTAACGGAGGAGGAAGTTGCAGAGCTGGTGGAACAGTATCGGCATAACAATTGCTCCCGGCAAATCAATCTTGGGAAGGGTGGAG
TTACTCACAACATGTTGGATGACATACACAATCATTGGAAAAGGGCTGAAGCTGTGAGGATCAAGTGCTTGGGAGTGCCAACTCTTGATATGGACAATATATGTTTCCAC
CTTGAGGATAAGTCTGGTGGGAAGATTATATATCGCCATATCAATGTCGTTCTTTTATATCGTGGTCGAAACTACGATCCCAAGAATCGACCAGCCATCCCTCTTATGTT
GTGGAAACCTTATGCACCAATATATCCAAAGCTTGTGAAGAATGTGGCTGATGGCTTGTCATTTGAAGAAACAAAGGAAATGAGAAGCAGAGGATTGAATTCCCCTCCTC
TAATGAAACTTAGTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTGGTTACCCTCGCCTCGCCCCACTCAAACGTCGCCGTATAGCGCTTCTTCTCTTCTCTACATCTCTGCAAAACTGCAACTTCATTACACCCTCGTCGAGCTGCC
GGAGATGGCGATTCATTTCCGAACACGAATCAGATTTCCAGATCACTGGAACCAGAAACCCAGTGGCTATTTCCTCTTGATCTACCGATTCATCTCCAAATCTCTGTCTG
AAAGCACCTACGATCCTCCATTTTCGCCTGCTTCCAAGCTCCAAAAACCGAAGAACAAGAAAACCCACGATGGAAATTCGAATTCAAACAAAAACCCCACTCTCCCTCTC
CAATCAATCGCCCAAATTCTCACCGTTTGGCCCGGGCCGACTCGACCGGAAATGGACCGGAACTTCGGCCCCACGGAGGTGGAGGTGAAGATAAACGAAGTGTTAGAGGA
GAGGAGACGGATTCTTGGAGACCCATTAACGGAGGAGGAAGTTGCAGAGCTGGTGGAACAGTATCGGCATAACAATTGCTCCCGGCAAATCAATCTTGGGAAGGGTGGAG
TTACTCACAACATGTTGGATGACATACACAATCATTGGAAAAGGGCTGAAGCTGTGAGGATCAAGTGCTTGGGAGTGCCAACTCTTGATATGGACAATATATGTTTCCAC
CTTGAGGATAAGTCTGGTGGGAAGATTATATATCGCCATATCAATGTCGTTCTTTTATATCGTGGTCGAAACTACGATCCCAAGAATCGACCAGCCATCCCTCTTATGTT
GTGGAAACCTTATGCACCAATATATCCAAAGCTTGTGAAGAATGTGGCTGATGGCTTGTCATTTGAAGAAACAAAGGAAATGAGAAGCAGAGGATTGAATTCCCCTCCTC
TAATGAAACTTAGTAAGTAA
Protein sequenceShow/hide protein sequence
MTWLPSPRPTQTSPYSASSLLYISAKLQLHYTLVELPEMAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPL
QSIAQILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFH
LEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK