; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038044 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038044
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Genome locationchr2:11890512..11890949
RNA-Seq ExpressionLag0038044
SyntenyLag0038044
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]7.3e-1837.69Show/hide
Query:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPI----YDVAVQENMPVLDFILNSSW
        NP++LVS+VL  +Y H   +L A    N S FW+GF+W R+LL   L  R+GN  +   F+DPWIP+  +F+P+      YDV V + +       N  W
Subjt:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPI----YDVAVQENMPVLDFILNSSW

Query:  DYIKLKATVCEEDVNIIATIPISAYDAEDN
        D   +    CEED ++I ++P+S Y++ D+
Subjt:  DYIKLKATVCEEDVNIIATIPISAYDAEDN

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.6e-1940.94Show/hide
Query:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFI-LNSSWDYI
        +P+LLVSKVL  +Y    SLL A   S  S FW+GF+W R+LL   L  R+GN  +   F+DPW+P+  TFKPL   + A+  +  V  FI  + +WD  
Subjt:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFI-LNSSWDYI

Query:  KLKATVCEEDVNIIATIPISAYDAEDN
         +  + C ED ++I ++PIS+Y+ +D+
Subjt:  KLKATVCEEDVNIIATIPISAYDAEDN

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.7e-1437.6Show/hide
Query:  PSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFI-LNSSWDYIK
        P+ LVS+VL  RY    S L A   +N S  WR  +W R+++K  +  RIGN K    F+D W+P+  TF+  PI+ +++  +  V D I  ++ WD IK
Subjt:  PSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFI-LNSSWDYIK

Query:  LKATVCEEDVNIIATIPISAYDAED
        L+    + D   I  IP+ A  AED
Subjt:  LKATVCEEDVNIIATIPISAYDAED

XP_030483444.1 uncharacterized protein LOC115700033 [Cannabis sativa]3.5e-1235.94Show/hide
Query:  MNPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFILN-SSWDY
        +NP+ ++++VL  RY  Q+S L A   S+ S  WRG VW +ELL   L RRIGN  +T  F DPWIP   +F P+      V + M V + I     W+ 
Subjt:  MNPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFILN-SSWDY

Query:  IKLKATVCEEDVNIIATIPISAYDAEDN
          +       D  +I +IPI+ ++ +D+
Subjt:  IKLKATVCEEDVNIIATIPISAYDAEDN

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]3.2e-1337.5Show/hide
Query:  MNPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFILNS-SWDY
        +NP+ ++++VL  RY  Q+S L A   S+ S  WRG VW +ELL   L RRIGN  +T  F DPWIP+  +F P+      V   M V + I  S  W+ 
Subjt:  MNPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFILNS-SWDY

Query:  IKLKATVCEEDVNIIATIPISAYDAEDN
          +       D  +I +IPI+ Y+ +D+
Subjt:  IKLKATVCEEDVNIIATIPISAYDAEDN

TrEMBL top hitse value%identityAlignment
A0A6J1BRN0 uncharacterized protein LOC1110047873.5e-1837.69Show/hide
Query:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPI----YDVAVQENMPVLDFILNSSW
        NP++LVS+VL  +Y H   +L A    N S FW+GF+W R+LL   L  R+GN  +   F+DPWIP+  +F+P+      YDV V + +       N  W
Subjt:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPI----YDVAVQENMPVLDFILNSSW

Query:  DYIKLKATVCEEDVNIIATIPISAYDAEDN
        D   +    CEED ++I ++P+S Y++ D+
Subjt:  DYIKLKATVCEEDVNIIATIPISAYDAEDN

A0A6J1DX30 uncharacterized protein LOC1110248743.2e-1940.94Show/hide
Query:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFI-LNSSWDYI
        +P+LLVSKVL  +Y    SLL A   S  S FW+GF+W R+LL   L  R+GN  +   F+DPW+P+  TFKPL   + A+  +  V  FI  + +WD  
Subjt:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFI-LNSSWDYI

Query:  KLKATVCEEDVNIIATIPISAYDAEDN
         +  + C ED ++I ++PIS+Y+ +D+
Subjt:  KLKATVCEEDVNIIATIPISAYDAEDN

A0A803PAK3 Uncharacterized protein2.2e-1236.51Show/hide
Query:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFILN-SSWDYI
        NP+ L+S++L  RY    S L A + S+ S+ WRG VW +ELL   L  ++GN +  L  + PW+P   +FKPL          M V D ILN   W+Y 
Subjt:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFILN-SSWDYI

Query:  KLKATVCEEDVNIIATIPISAYDAED
         L       DV +I +IP++  +  D
Subjt:  KLKATVCEEDVNIIATIPISAYDAED

A0A803PQH1 Uncharacterized protein2.9e-1234.65Show/hide
Query:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPI--YDVAVQENMPVLDFILNSSWDY
        NP+ L+S++L  RY    S L A + S+ S+ WRG VW +ELL   L  ++GN  +    TDPW+P    FKPL     D  + +   +LD   N  W+Y
Subjt:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPI--YDVAVQENMPVLDFILNSSWDY

Query:  IKLKATVCEEDVNIIATIPISAYDAED
          L+      DV  I ++P++ ++ +D
Subjt:  IKLKATVCEEDVNIIATIPISAYDAED

A0A803QJ22 Uncharacterized protein2.9e-1235.71Show/hide
Query:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFILN-SSWDYI
        NP+ L+S++L  RY    S L A + S  S+ WRG VW +ELL   L  ++GN +  L  + PW+P   +FKPL          M V D ILN   W+Y 
Subjt:  NPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFILN-SSWDYI

Query:  KLKATVCEEDVNIIATIPISAYDAED
         L       D+ +I +IP++  +  D
Subjt:  KLKATVCEEDVNIIATIPISAYDAED

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.2e-0434.25Show/hide
Query:  PSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPL
        P  L+S++L  RY    S++   + +  S  WR  +  RELL   L R IG+   T  + D WI  E    PL
Subjt:  PSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPL

Arabidopsis top hitse value%identityAlignment
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.9e-0634.25Show/hide
Query:  PSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPL
        P  L+S++L  RY    S++   + +  S  WR  +  RELL   L R IG+   T  + D WI  E    PL
Subjt:  PSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCTTCTCTTTTGGTCTCAAAGGTGTTGAGTGGGCGATACGCTCATCAAGAGTCGTTGTTGTTGGCTCCCATTAAATCTAATTGTTCCGTATTTTGGAGGGGTTT
TGTTTGGGCACGAGAGTTGTTGAAAAGCGAGCTTGGAAGAAGGATTGGGAATGAGAAATCTACTTTATTTTTTACAGATCCTTGGATACCTAAGGAGGTAACTTTCAAAC
CTTTGCCTATTTATGACGTGGCAGTTCAGGAGAACATGCCAGTTTTGGATTTCATACTGAATTCAAGTTGGGACTACATCAAACTGAAGGCTACGGTGTGCGAGGAAGAT
GTTAATATTATTGCCACAATCCCGATCAGCGCTTATGATGCTGAGGATAATGGATATGGCATTATTGCTCTAATGGCCAATATTCAGTGCGTAGCGGTTACAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCCTTCTCTTTTGGTCTCAAAGGTGTTGAGTGGGCGATACGCTCATCAAGAGTCGTTGTTGTTGGCTCCCATTAAATCTAATTGTTCCGTATTTTGGAGGGGTTT
TGTTTGGGCACGAGAGTTGTTGAAAAGCGAGCTTGGAAGAAGGATTGGGAATGAGAAATCTACTTTATTTTTTACAGATCCTTGGATACCTAAGGAGGTAACTTTCAAAC
CTTTGCCTATTTATGACGTGGCAGTTCAGGAGAACATGCCAGTTTTGGATTTCATACTGAATTCAAGTTGGGACTACATCAAACTGAAGGCTACGGTGTGCGAGGAAGAT
GTTAATATTATTGCCACAATCCCGATCAGCGCTTATGATGCTGAGGATAATGGATATGGCATTATTGCTCTAATGGCCAATATTCAGTGCGTAGCGGTTACAAATTAG
Protein sequenceShow/hide protein sequence
MNPSLLVSKVLSGRYAHQESLLLAPIKSNCSVFWRGFVWARELLKSELGRRIGNEKSTLFFTDPWIPKEVTFKPLPIYDVAVQENMPVLDFILNSSWDYIKLKATVCEED
VNIIATIPISAYDAEDNGYGIIALMANIQCVAVTN