; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038046 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038046
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHeterodimeric geranylgeranyl pyrophosphate synthase small subunit
Genome locationchr2:11916451..11917356
RNA-Seq ExpressionLag0038046
SyntenyLag0038046
Gene Ontology termsGO:0004659 - prenyltransferase activity (molecular function)
InterPro domainsIPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031902.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa]7.0e-12477.81Show/hide
Query:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG
        MAISLNLLQL  N   PKF  +N V PA Y R PPR+TV MSQ +PSYWAAINEDIEDHLRRVIP KDP AVY+PLGHF+ SAPRNSA ALCIAACELVG
Subjt:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG

Query:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG
        G RDQAMAAATA+Q+ HAA  T EYPPLTA + +RAAVV+R Y P+IQL+TG GIAP+GFEILA SCDWSE  SER  RVM E++RAMGT GWIGGQFRG
Subjt:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG

Query:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDFE
        L +EEAT EEVIEK EG LHACGGACGAI+GGG+EEE+EKMRK+GKLVG+VKGL+KNVFGGKENE+KREKIEELKVLA KELEGF G+ VHEIYGFLDF 
Subjt:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDFE

Query:  GL
        GL
Subjt:  GL

KAG6592047.1 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-12779.61Show/hide
Query:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG
        MAISLNLLQLHGN  LPKF  SN + PAVYFRAP R TV+MSQ +PSYWAAINEDI+DHLRRVI AKDPP VY+PL HFVFSAPRNSA A+CIAACELVG
Subjt:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG

Query:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG
        GRRDQAMAAATALQ+ +AA YTREYPPLTAR +S AAVVDR YGPNIQLLTG GIAPIGFEILAGSCD SES SER  RVMAEMARAMG+ GWIGGQF+ 
Subjt:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG

Query:  LEEEEAT--AEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLD
        LEE  A    EEVIE TEGELHA GGACGAILGGG+EEE+EKMRK+G++VG+VKGLSK VFGGKENERKREKI ELK LA KELEGFKG+ V ++  F D
Subjt:  LEEEEAT--AEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLD

Query:  FEGL
        FEGL
Subjt:  FEGL

XP_022975728.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita maxima]4.4e-12678.29Show/hide
Query:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG
        MAISLNLLQLHGN  LPKF  SN + PAVYFRAP R TV+MSQ +PSYWAAINEDIE+HLRR+I AKDPP VY+PLGHFVFSAPRNSA A+CIAACE VG
Subjt:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG

Query:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG
        G RDQAMAAATALQ+ +AA YTREYPPLTAR +S AA+VDR Y PNIQLLTG GIAPIGFEILAGSCD SES S+R  RVM EMARAMG+ GWIGGQF+ 
Subjt:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG

Query:  LEE--EEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLD
        LEE    A AEEVIEKTEGELHA GGACGAILG GSEEE+EKMRK+G++VG+VKGLSK VFGGKENERKREKI+ELK LA KELEGFKG+ V ++  F D
Subjt:  LEE--EEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLD

Query:  FEGL
        FEGL
Subjt:  FEGL

XP_023536167.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita pepo subsp. pepo]2.1e-12880.79Show/hide
Query:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG
        MAISLNLLQLHGN  LPKF  SN + PAVYFRAP R TV+MSQ +PSYWAAINEDI+DHLRRVI AKDPPAVY+PLGHFVFSAPRNSA A+CIAACELVG
Subjt:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG

Query:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG
        G RDQAMAAATALQ+ +AA YTREYPPLTAR  S AAVVDR YGPNIQLLTG GIAPIGFEILAGSCD SES SER  RVM EMARAMG+ GWIGGQF+ 
Subjt:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG

Query:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDFE
        LEE  A AEEVIE TEGELHA GGACGAILGGGSEEE+EKMRK+G++VG+VKGLSK VFGGKENERKREKI+ELK LA KELEGFKG+ V ++  F DFE
Subjt:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDFE

Query:  GL
        GL
Subjt:  GL

XP_038896497.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida]6.1e-13684.11Show/hide
Query:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG
        MAISLNLLQL  N   PKF   NPV PAVYFRAP R+TV+MSQ +PSYWA INEDIEDHLR+VIPAKDPPAV++PLGHF+FSAPRNSAPALCIAACELVG
Subjt:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG

Query:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG
        GRRD+AMAAATALQ+ HAA YTREYPPLTAR  SRAAVVDR YG NIQLLTG  IAPI FEILAGSCDWSES SER   VM EMARAMGT GW+GGQFRG
Subjt:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG

Query:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDFE
        L EEEATAEEV EKTEG LHACGGACGAILGGGSEEE+EKMRK+GKLVG+VKGLSKNVFGGKENERKREKIEE KVLA K LEGFKG+ VHEIYGFLDFE
Subjt:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDFE

Query:  GL
        GL
Subjt:  GL

TrEMBL top hitse value%identityAlignment
A0A0A0K8P9 Uncharacterized protein1.9e-12277.26Show/hide
Query:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG
        MAISLNLLQL  N   PKF  +N + P  Y R PPR+  +MSQ +PSYWAAINEDIEDHLRRVIP KDP AVY+PLGHF+FSAPRNSAPALCIAACELVG
Subjt:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG

Query:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG
        G RDQAMAAATA+Q+ +AA  T EYPPLTAR   RA+VVDR YG N+QL+TG GI P+GFEILA SCDWSE  SER  RVM E+ARAMGT GWIGGQFRG
Subjt:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG

Query:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF
        L EEEAT EEVIEKTEG LHACGGACGAI+GGG+EEE+EKMRK+GKLVGIVKGL++ VFGGKENERKREKIEELKVLA KELEGF G+ V +IYGFLDF
Subjt:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF

A0A1S4DWU7 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like6.0e-9771Show/hide
Query:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG
        MAISLNLLQL  N   PKF  +N V PA Y R PPR+TV MSQ +PSYWAAINEDIEDHLRRVIP KDP AVY+PLGHF+ SAPRNSA ALCIAACELVG
Subjt:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG

Query:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG
        G RDQAMAAATA+Q+ HAA  T EYPPLTA + +RAAVV+R Y P+IQL+TG GIAP+GFEILA SCDWSE  SER  RVM E++RAMGT GWIGGQFRG
Subjt:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG

Query:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKRE
        L +EEAT EEVIEK EG LHACGGACGAI+GGG+EEE+EKMRK+GKL+       +  +  +  ER++E
Subjt:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKRE

A0A2N9F8D7 Uncharacterized protein4.1e-6949.16Show/hide
Query:  QLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQSPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAA
        +L+GN      S S+ V P++  R+     + MSQ+ SYWA++N +IE HL++ IP + P  V++P+ H VF+AP+N+APALC+AACELVGG RDQAMAA
Subjt:  QLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQSPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAA

Query:  ATALQITHAALYTREYPPLTARANSRA-AVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATA
        A+AL + HAA +T E+ PLT R   ++  V+  AYGPNI+LL G  I P GFE+LA S D +++ S+R LRV  E+ RAMG+ G + GQ+  LE  ++  
Subjt:  ATALQITHAALYTREYPPLTARANSRA-AVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATA

Query:  EE---------VIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLD
        EE         V +K EG LHACG ACGAILGGGSEEE+EK+R+FG  VG+++G+      G++ +  +E +EEL+ LALKELE FKG+ V  I  F++
Subjt:  EE---------VIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLD

A0A5A7SLD5 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit3.4e-12477.81Show/hide
Query:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG
        MAISLNLLQL  N   PKF  +N V PA Y R PPR+TV MSQ +PSYWAAINEDIEDHLRRVIP KDP AVY+PLGHF+ SAPRNSA ALCIAACELVG
Subjt:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG

Query:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG
        G RDQAMAAATA+Q+ HAA  T EYPPLTA + +RAAVV+R Y P+IQL+TG GIAP+GFEILA SCDWSE  SER  RVM E++RAMGT GWIGGQFRG
Subjt:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG

Query:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDFE
        L +EEAT EEVIEK EG LHACGGACGAI+GGG+EEE+EKMRK+GKLVG+VKGL+KNVFGGKENE+KREKIEELKVLA KELEGF G+ VHEIYGFLDF 
Subjt:  LEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDFE

Query:  GL
        GL
Subjt:  GL

A0A6J1IK44 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like2.1e-12678.29Show/hide
Query:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG
        MAISLNLLQLHGN  LPKF  SN + PAVYFRAP R TV+MSQ +PSYWAAINEDIE+HLRR+I AKDPP VY+PLGHFVFSAPRNSA A+CIAACE VG
Subjt:  MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQ-SPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVG

Query:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG
        G RDQAMAAATALQ+ +AA YTREYPPLTAR +S AA+VDR Y PNIQLLTG GIAPIGFEILAGSCD SES S+R  RVM EMARAMG+ GWIGGQF+ 
Subjt:  GRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRG

Query:  LEE--EEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLD
        LEE    A AEEVIEKTEGELHA GGACGAILG GSEEE+EKMRK+G++VG+VKGLSK VFGGKENERKREKI+ELK LA KELEGFKG+ V ++  F D
Subjt:  LEE--EEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLD

Query:  FEGL
        FEGL
Subjt:  FEGL

SwissProt top hitse value%identityAlignment
O04046 Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 21.8e-2126.39Show/hide
Query:  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGP
        Y  +  E +   L   IP  +P  +++ + + + +A +   P LC+A+CELVGG+ + AM AA A+++ H     ++  P     + R       + YG 
Subjt:  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGP

Query:  NIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSEE
         + +L+G  +  + FE +      +E  SER +  + E+AR++GT G + GQ   +  E     EV         + KT   L       GAI+GGGS+E
Subjt:  NIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSEE

Query:  EVEKMRKFGKLVGIV------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF
        E+E +RKF + +G++                  K   K+   GK         E+ +E ++ L   A + L+GF  + V  +     F
Subjt:  EVEKMRKFGKLVGIV------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF

P34802 Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic2.0e-2028.7Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYG
        SY     E +   L   +P ++P  +++ + + + +  +   P LCIAACELVGG    AM AA A+++ H      +  P     + R       + +G
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYG

Query:  PNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSE
         ++ +L G  +    FE LA +         R +R + E+A+A+GT G + GQ   +  E     +V         + KT   L A     GAI+GGGS+
Subjt:  PNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSE

Query:  EEVEKMRKFGKLVGIV
        +E+E++RKF + +G++
Subjt:  EEVEKMRKFGKLVGIV

Q39108 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic1.2e-2529.1Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFS-APRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDR--AY
        +YW  +  +I   L   IP K P  +Y+ + + V +   + + P +C+AACEL GG R  A   A AL++ HAA    +  P       R         Y
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFS-APRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDR--AY

Query:  GPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRK
        G  + +L G  + P+ F+ +              LR++ E+AR +G+ G   GQ+  LE        V EK  G +  C   CG +LGG +E+E++ +R+
Subjt:  GPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRK

Query:  FGKLVGIVKGL-------SKNVFGGKENERKREKIEELKVLALKELEGFK-----GKNVHEIYGFLDF
        +G+ VG++  +        K  + G   +   E  EELK  A KEL+ F      G  +  +Y F+D+
Subjt:  FGKLVGIVKGL-------SKNVFGGKENERKREKIEELKVLALKELEGFK-----GKNVHEIYGFLDF

Q9LRR0 Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic1.5e-2029.62Show/hide
Query:  VIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGPNIQLLTGAGIAPIGF
        ++P ++P  V + + + + +  +   P LCIA CELVGG    AM+AA A+++ H +    +  P    A+ R       + +G ++ +L G  +  + F
Subjt:  VIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGPNIQLLTGAGIAPIGF

Query:  EILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIV
        E +        + SER +R + E+ARA+GT G + GQ   L  E     +V         + KT   L A     GAI+GGG+EEE+EK+RK+ + +G++
Subjt:  EILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGIV

Query:  ------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFK
                          K   K+V  GK         ER RE  E+L   A ++L GF+
Subjt:  ------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFK

Q9SLG2 Geranylgeranyl pyrophosphate synthase 41.8e-2126.39Show/hide
Query:  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGP
        Y  +  E I   L   IP  +P  ++K + + + +  +   P LC+AACELVGG    A+ AA A+++ H     ++  P     + R       + +G 
Subjt:  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGP

Query:  NIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFR-----GLEEEEATAEEV----IEKTEGELHACGGACGAILGGGSEE
        ++ +L+G  +  + FE L      ++  S++ +R + E+A+++GT G + GQ +     GLE+ +   E++    + KT G L       GA++GGG+E+
Subjt:  NIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFR-----GLEEEEATAEEV----IEKTEGELHACGGACGAILGGGSEE

Query:  EVEKMRKFGKLVGIV------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF
        E+EK+R F + +G++                  K   K+   GK         E+ +E +E+LK  A + L+GF    V  +    +F
Subjt:  EVEKMRKFGKLVGIV------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF

Arabidopsis top hitse value%identityAlignment
AT2G18640.1 geranylgeranyl pyrophosphate synthase 41.3e-2226.39Show/hide
Query:  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGP
        Y  +  E I   L   IP  +P  ++K + + + +  +   P LC+AACELVGG    A+ AA A+++ H     ++  P     + R       + +G 
Subjt:  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGP

Query:  NIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFR-----GLEEEEATAEEV----IEKTEGELHACGGACGAILGGGSEE
        ++ +L+G  +  + FE L      ++  S++ +R + E+A+++GT G + GQ +     GLE+ +   E++    + KT G L       GA++GGG+E+
Subjt:  NIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFR-----GLEEEEATAEEV----IEKTEGELHACGGACGAILGGGSEE

Query:  EVEKMRKFGKLVGIV------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF
        E+EK+R F + +G++                  K   K+   GK         E+ +E +E+LK  A + L+GF    V  +    +F
Subjt:  EVEKMRKFGKLVGIV------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF

AT2G23800.1 geranylgeranyl pyrophosphate synthase 21.3e-2226.39Show/hide
Query:  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGP
        Y  +  E +   L   IP  +P  +++ + + + +A +   P LC+A+CELVGG+ + AM AA A+++ H     ++  P     + R       + YG 
Subjt:  YWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGP

Query:  NIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSEE
         + +L+G  +  + FE +      +E  SER +  + E+AR++GT G + GQ   +  E     EV         + KT   L       GAI+GGGS+E
Subjt:  NIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSEE

Query:  EVEKMRKFGKLVGIV------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF
        E+E +RKF + +G++                  K   K+   GK         E+ +E ++ L   A + L+GF  + V  +     F
Subjt:  EVEKMRKFGKLVGIV------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFKGKNVHEIYGFLDF

AT3G14510.1 Polyprenyl synthetase family protein8.2e-2229.89Show/hide
Query:  RVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGPNIQLLTGAGIAPIG
        R +P ++P  V + + + + +  +   P LCIA CELVGG    AM+AA A+++ H +    +  P    A+ R       + +G ++ +L G  +  + 
Subjt:  RVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYGPNIQLLTGAGIAPIG

Query:  FEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGI
        FE +        + SER +R + E+ARA+GT G + GQ   L  E     +V         + KT   L A     GAI+GGG+EEE+EK+RK+ + +G+
Subjt:  FEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSEEEVEKMRKFGKLVGI

Query:  V------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFK
        +                  K   K+V  GK         ER RE  E+L   A ++L GF+
Subjt:  V------------------KGLSKNVFGGKEN-------ERKREKIEELKVLALKELEGFK

AT4G36810.1 geranylgeranyl pyrophosphate synthase 11.4e-2128.7Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYG
        SY     E +   L   +P ++P  +++ + + + +  +   P LCIAACELVGG    AM AA A+++ H      +  P     + R       + +G
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAA--VVDRAYG

Query:  PNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSE
         ++ +L G  +    FE LA +         R +R + E+A+A+GT G + GQ   +  E     +V         + KT   L A     GAI+GGGS+
Subjt:  PNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEV---------IEKTEGELHACGGACGAILGGGSE

Query:  EEVEKMRKFGKLVGIV
        +E+E++RKF + +G++
Subjt:  EEVEKMRKFGKLVGIV

AT4G38460.1 geranylgeranyl reductase8.5e-2729.1Show/hide
Query:  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFS-APRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDR--AY
        +YW  +  +I   L   IP K P  +Y+ + + V +   + + P +C+AACEL GG R  A   A AL++ HAA    +  P       R         Y
Subjt:  SYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFS-APRNSAPALCIAACELVGGRRDQAMAAATALQITHAALYTREYPPLTARANSRAAVVDR--AY

Query:  GPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRK
        G  + +L G  + P+ F+ +              LR++ E+AR +G+ G   GQ+  LE        V EK  G +  C   CG +LGG +E+E++ +R+
Subjt:  GPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEVIEKTEGELHACGGACGAILGGGSEEEVEKMRK

Query:  FGKLVGIVKGL-------SKNVFGGKENERKREKIEELKVLALKELEGFK-----GKNVHEIYGFLDF
        +G+ VG++  +        K  + G   +   E  EELK  A KEL+ F      G  +  +Y F+D+
Subjt:  FGKLVGIVKGL-------SKNVFGGKENERKREKIEELKVLALKELEGFK-----GKNVHEIYGFLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCTCTCTCAATCTCCTGCAACTCCATGGAAATTCAATGCTGCCCAAGTTCTCGATATCGAACCCGGTCCTACCGGCAGTTTATTTCAGAGCTCCGCCGAGGAC
CACCGTCATCATGTCGCAGAGTCCGTCGTACTGGGCGGCGATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTGTACAAGC
CGTTGGGCCATTTCGTCTTCTCGGCGCCACGAAATTCGGCTCCTGCGCTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCGCCGGGATCAGGCCATGGCGGCAGCCACG
GCTCTCCAAATCACCCATGCCGCACTGTACACTCGGGAGTACCCTCCACTGACGGCGCGTGCGAACTCACGCGCCGCCGTGGTGGACCGTGCATACGGCCCGAACATCCA
GCTTCTGACCGGGGCCGGAATAGCTCCAATTGGGTTCGAGATTCTGGCTGGGTCGTGCGATTGGAGCGAGAGCGAGTCGGAGCGGACTCTCCGTGTGATGGCGGAAATGG
CACGCGCCATGGGGACGAACGGGTGGATTGGGGGGCAGTTCCGGGGATTGGAGGAGGAGGAGGCGACGGCGGAGGAAGTGATCGAGAAGACGGAAGGTGAGCTACACGCG
TGTGGGGGCGCGTGTGGGGCGATATTGGGAGGTGGAAGTGAAGAGGAAGTAGAGAAGATGAGGAAGTTTGGTAAATTGGTGGGGATTGTGAAAGGATTGTCTAAAAATGT
GTTTGGAGGGAAAGAAAATGAGAGAAAGAGAGAGAAAATTGAGGAGTTGAAGGTTTTGGCTTTGAAGGAATTGGAAGGTTTCAAAGGGAAAAATGTTCATGAGATCTATG
GCTTCCTTGATTTTGAGGGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCTCTCTCAATCTCCTGCAACTCCATGGAAATTCAATGCTGCCCAAGTTCTCGATATCGAACCCGGTCCTACCGGCAGTTTATTTCAGAGCTCCGCCGAGGAC
CACCGTCATCATGTCGCAGAGTCCGTCGTACTGGGCGGCGATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTGTACAAGC
CGTTGGGCCATTTCGTCTTCTCGGCGCCACGAAATTCGGCTCCTGCGCTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCGCCGGGATCAGGCCATGGCGGCAGCCACG
GCTCTCCAAATCACCCATGCCGCACTGTACACTCGGGAGTACCCTCCACTGACGGCGCGTGCGAACTCACGCGCCGCCGTGGTGGACCGTGCATACGGCCCGAACATCCA
GCTTCTGACCGGGGCCGGAATAGCTCCAATTGGGTTCGAGATTCTGGCTGGGTCGTGCGATTGGAGCGAGAGCGAGTCGGAGCGGACTCTCCGTGTGATGGCGGAAATGG
CACGCGCCATGGGGACGAACGGGTGGATTGGGGGGCAGTTCCGGGGATTGGAGGAGGAGGAGGCGACGGCGGAGGAAGTGATCGAGAAGACGGAAGGTGAGCTACACGCG
TGTGGGGGCGCGTGTGGGGCGATATTGGGAGGTGGAAGTGAAGAGGAAGTAGAGAAGATGAGGAAGTTTGGTAAATTGGTGGGGATTGTGAAAGGATTGTCTAAAAATGT
GTTTGGAGGGAAAGAAAATGAGAGAAAGAGAGAGAAAATTGAGGAGTTGAAGGTTTTGGCTTTGAAGGAATTGGAAGGTTTCAAAGGGAAAAATGTTCATGAGATCTATG
GCTTCCTTGATTTTGAGGGGCTTTAG
Protein sequenceShow/hide protein sequence
MAISLNLLQLHGNSMLPKFSISNPVLPAVYFRAPPRTTVIMSQSPSYWAAINEDIEDHLRRVIPAKDPPAVYKPLGHFVFSAPRNSAPALCIAACELVGGRRDQAMAAAT
ALQITHAALYTREYPPLTARANSRAAVVDRAYGPNIQLLTGAGIAPIGFEILAGSCDWSESESERTLRVMAEMARAMGTNGWIGGQFRGLEEEEATAEEVIEKTEGELHA
CGGACGAILGGGSEEEVEKMRKFGKLVGIVKGLSKNVFGGKENERKREKIEELKVLALKELEGFKGKNVHEIYGFLDFEGL