; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038052 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038052
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:11995327..11995986
RNA-Seq ExpressionLag0038052
SyntenyLag0038052
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCA66040.1 hypothetical protein [Beta vulgaris subsp. vulgaris]6.0e-2436.71Show/hide
Query:  MNRLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYH
        + RL      P +  GDFNEI  IEEKE G  R +  ++AF EV+D C +KDLG+VG++FTW+R     + IRERLDR+ AN +  +      + H   +
Subjt:  MNRLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYH

Query:  HSDHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDINSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVSLRVC
         SDH  L  +    D   RG K    KFE  WL   +  KI+E+ WN   G DI    N++    +SL  W   +  G++K   +RK + +  L  L+  
Subjt:  HSDHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDINSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVSLRVC

Query:  DAERPTL
        D +  TL
Subjt:  DAERPTL

KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]1.6e-2435.53Show/hide
Query:  RLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHS
        RL DLF  PW+ GGDFNEIL I EK+ G  R+ + +  F   +D C L DLG+ G  FTW   ++  + ++ERLDR F NQ   ++   + + +  + +S
Subjt:  RLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHS

Query:  DHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDIN--SFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVSL
        DHR + A +    ++ R  K R  +FE  WLK P+  +II ++W SL     N  S  +    C   L  W+K +  GS+   V    K++ +L+S+
Subjt:  DHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDIN--SFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVSL

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]1.6e-2435.53Show/hide
Query:  RLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHS
        RL DLF  PW+ GGDFNEIL I EK+ G  R+ + +  F   +D C L DLG+ G  FTW   ++  + ++ERLDR F NQ   ++   + + +  + +S
Subjt:  RLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHS

Query:  DHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDIN--SFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVSL
        DHR + A +    ++ R  K R  +FE  WLK P+  +II ++W SL     N  S  +    C   L  W+K +  GS+   V    K++ +L+S+
Subjt:  DHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDIN--SFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVSL

TXG57064.1 hypothetical protein EZV62_018377 [Acer yangbiense]3.5e-2434.52Show/hide
Query:  MNRLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYH
        + RL  +  + W+ GGDFNEIL ++EK  G  ++   I  F EV+D C L DLG+ G K TW   +  D+ ++ER+DR+ A+   I++     +QH GY+
Subjt:  MNRLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYH

Query:  HSDHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLR-GTDINSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVS
         SDHR L        +  R    +  KFE  WLK  +  K+I + WN L     +     K+  C   L  W   +  GS++  +E K KE++ L+S
Subjt:  HSDHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLR-GTDINSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVS

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]7.1e-2538Show/hide
Query:  MNRLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYH
        + RL  +F  PW++GGDFNEIL   EK  G  R Q+ ++ F + +D C L D G+VGD FTW    +    I ERLDR   N  +  + + + I+H  + 
Subjt:  MNRLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYH

Query:  HSDHRILSAEITFEDKKFRGRKS--RELKFEESWLKHPDSFKIIEKNW---NSLRGTDINSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLV
         SDHR + AE     +   GR+   R  +FEE W    +  +I+ + W     L GT    F  KI +CL+ L KW+  RL GS++G + RK  EIQ +V
Subjt:  HSDHRILSAEITFEDKKFRGRKS--RELKFEESWLKHPDSFKIIEKNW---NSLRGTDINSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLV

TrEMBL top hitse value%identityAlignment
A0A6J1DRA0 uncharacterized protein LOC1110224233.4e-2538Show/hide
Query:  MNRLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYH
        + RL  +F  PW++GGDFNEIL   EK  G  R Q+ ++ F + +D C L D G+VGD FTW    +    I ERLDR   N  +  + + + I+H  + 
Subjt:  MNRLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYH

Query:  HSDHRILSAEITFEDKKFRGRKS--RELKFEESWLKHPDSFKIIEKNW---NSLRGTDINSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLV
         SDHR + AE     +   GR+   R  +FEE W    +  +I+ + W     L GT    F  KI +CL+ L KW+  RL GS++G + RK  EIQ +V
Subjt:  HSDHRILSAEITFEDKKFRGRKS--RELKFEESWLKHPDSFKIIEKNW---NSLRGTDINSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLV

A0A7J6GL46 CCHC-type domain-containing protein7.6e-2535.53Show/hide
Query:  RLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHS
        RL DLF  PW+ GGDFNEIL I EK+ G  R+ + +  F   +D C L DLG+ G  FTW   ++  + ++ERLDR F NQ   ++   + + +  + +S
Subjt:  RLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHS

Query:  DHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDIN--SFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVSL
        DHR + A +    ++ R  K R  +FE  WLK P+  +II ++W SL     N  S  +    C   L  W+K +  GS+   V    K++ +L+S+
Subjt:  DHRILSAEITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDIN--SFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVSL

A0A803PJK4 Uncharacterized protein1.2e-2536.46Show/hide
Query:  PWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHSDHRILSAE
        PW++ GDFNEI+  ++K  G +RN++QI+AF E VDHC L +L + G++FTW  +  + + ++ERLD  F N    ++     ++H  ++ SDHR+L A+
Subjt:  PWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHSDHRILSAE

Query:  ITFED-KKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDINSFN-NKIKNCLQSLDKWHKDRLQGSIKGVVERKLK
        I+  + ++ R  KSR  +FE+ WLK  D  +II K WN+L  +D  +   + I +C   L  WH+ +      G + +K+K
Subjt:  ITFED-KKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDINSFN-NKIKNCLQSLDKWHKDRLQGSIKGVVERKLK

A0A803QED6 Uncharacterized protein1.8e-2635.26Show/hide
Query:  PWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHSDHRILSAE
        PW++ GDFNEIL    K  G LRN+AQ++ F +V+D C L +  + GD+FTW + +     I+ERLD  FAN     + + I   H  Y+ SDHR ++  
Subjt:  PWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHSDHRILSAE

Query:  I-----TFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDI-NSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNL
        I     T + ++ R R+SR  +FE+ WL+  ++  +I++NW+ +   ++ + F N ++ C +SL +WH+ +  GS K  + R  K++++L
Subjt:  I-----TFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDI-NSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNL

A0A803QG78 Uncharacterized protein3.4e-2538.04Show/hide
Query:  MNRLGDLF-HYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGY
        + RL D+  H PW+  GDFNEI+    K  G LRN++Q+E F +V+DHC L +  + G+ FTW ++    + I+ERLD  F N    +     ++QHH Y
Subjt:  MNRLGDLF-HYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGY

Query:  HHSDHRILSAEITFEDKKFRGRKSR-ELKFEESWLKHPDSFKIIEKNWNSLRGTD-INSFNNKIKNCLQSLDKWHKDRLQGSIK
        + SDHR +SA IT  D   +  K R   +FE+ WL  P+   +I  +WN+    D I +    + +C  SL KWH+ +  GS+K
Subjt:  HHSDHRILSAEITFEDKKFRGRKSR-ELKFEESWLKHPDSFKIIEKNWNSLRGTD-INSFNNKIKNCLQSLDKWHKDRLQGSIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGGTTGGGAGATCTCTTCCATTACCCTTGGGTTATAGGTGGAGATTTTAATGAGATTCTCGGAATAGAAGAAAAGGAATGCGGCAGATTAAGAAATCAAGCCCA
AATTGAAGCTTTTTCCGAGGTAGTAGATCATTGTCTCCTAAAAGACCTGGGCTGGGTGGGGGACAAGTTTACCTGGAGGAGAAGCAAAAGGAAAGATAGTTGGATCAGAG
AAAGATTAGACCGTATTTTCGCTAATCAGGACATGATAAACATGTGCAAGGATATCTCCATCCAGCACCACGGCTACCATCACTCAGACCACAGAATTCTTTCGGCAGAG
ATTACCTTTGAAGATAAGAAATTCAGGGGCAGGAAGAGCAGGGAGTTGAAGTTCGAAGAAAGCTGGTTAAAACACCCTGATAGCTTTAAGATTATCGAGAAAAATTGGAA
TAGCCTCCGGGGGACTGATATAAACTCCTTCAACAACAAAATCAAGAATTGTCTTCAGAGCTTAGATAAGTGGCATAAGGACAGGCTCCAAGGTTCGATTAAAGGGGTTG
TGGAAAGAAAGCTCAAAGAAATTCAGAACCTAGTGTCGCTACGGGTTTGCGACGCGGAGCGGCCGACTTTGTTCCCAAGAGGAGGAAAATGGAGTCGCCACCAGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGGTTGGGAGATCTCTTCCATTACCCTTGGGTTATAGGTGGAGATTTTAATGAGATTCTCGGAATAGAAGAAAAGGAATGCGGCAGATTAAGAAATCAAGCCCA
AATTGAAGCTTTTTCCGAGGTAGTAGATCATTGTCTCCTAAAAGACCTGGGCTGGGTGGGGGACAAGTTTACCTGGAGGAGAAGCAAAAGGAAAGATAGTTGGATCAGAG
AAAGATTAGACCGTATTTTCGCTAATCAGGACATGATAAACATGTGCAAGGATATCTCCATCCAGCACCACGGCTACCATCACTCAGACCACAGAATTCTTTCGGCAGAG
ATTACCTTTGAAGATAAGAAATTCAGGGGCAGGAAGAGCAGGGAGTTGAAGTTCGAAGAAAGCTGGTTAAAACACCCTGATAGCTTTAAGATTATCGAGAAAAATTGGAA
TAGCCTCCGGGGGACTGATATAAACTCCTTCAACAACAAAATCAAGAATTGTCTTCAGAGCTTAGATAAGTGGCATAAGGACAGGCTCCAAGGTTCGATTAAAGGGGTTG
TGGAAAGAAAGCTCAAAGAAATTCAGAACCTAGTGTCGCTACGGGTTTGCGACGCGGAGCGGCCGACTTTGTTCCCAAGAGGAGGAAAATGGAGTCGCCACCAGTCTTGA
Protein sequenceShow/hide protein sequence
MNRLGDLFHYPWVIGGDFNEILGIEEKECGRLRNQAQIEAFSEVVDHCLLKDLGWVGDKFTWRRSKRKDSWIRERLDRIFANQDMINMCKDISIQHHGYHHSDHRILSAE
ITFEDKKFRGRKSRELKFEESWLKHPDSFKIIEKNWNSLRGTDINSFNNKIKNCLQSLDKWHKDRLQGSIKGVVERKLKEIQNLVSLRVCDAERPTLFPRGGKWSRHQS