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Lag0038164 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038164
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:13224616..13226066
RNA-Seq ExpressionLag0038164
SyntenyLag0038164
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012847426.1 PREDICTED: uncharacterized protein LOC105967373 [Erythranthe guttata]1.4e-1332.61Show/hide
Query:  GFLGNPFTWYKSPKNRSSIRERLDR------FFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESW
        GF+G PFTW  + K   + RERLDR      +  +  N+R      VRHL+ +YSDH P+L+E  + A I ++  R R + FE  W+K +E   II+E+W
Subjt:  GFLGNPFTWYKSPKNRSSIRERLDR------FFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESW

Query:  SIN-GQTSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWKMRSR
          N  Q ++ +  + ++     L  W+++            K+K ++ K R L     +E+  L +ELD LL++EE+ W+ R++
Subjt:  SIN-GQTSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWKMRSR

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]2.2e-1935.06Show/hide
Query:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIK-RKRYRKRPYHFEESWVKFDESVSIIKESWSINGQ
        GF+G+ FTW    K R  I ERLDRF    + F+   ++++RHL  + SDH+PIL E   V +    +R  +RP+ FEE W  F E   I++  W++ G 
Subjt:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIK-RKRYRKRPYHFEESWVKFDESVSIIKESWSINGQ

Query:  TSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWK
           T    KI   ++ L +WN  R   +++ AI  K+ EI+  ++    G    +   +++L+ LLEEEE YW+
Subjt:  TSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWK

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]4.4e-1231.86Show/hide
Query:  GRIDAFIKDKEGFWRRGGFLGNPFTWYKSP------------------------------------KNRSSIR-----ERLDRFFYIASNFRDNNSIKVR
        G ID+ I DK G WR  GF GNP T+ +S                                     +N S +R     ERLDRF    S      ++KV 
Subjt:  GRIDAFIKDKEGFWRRGGFLGNPFTWYKSP------------------------------------KNRSSIR-----ERLDRFFYIASNFRDNNSIKVR

Query:  HLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESWSINGQTSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDK
        HL L+ SDH+PIL             +++R   FEESW++ D    II  +W             KI   +  L EWNK+R   ++K AI  K+KE+E +
Subjt:  HLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESWSINGQTSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDK

Query:  LRHL
        LR L
Subjt:  LRHL

XP_023892689.1 uncharacterized protein LOC112004687 [Quercus suber]2.6e-1230.14Show/hide
Query:  IEDGPKM-DENNPKGRIDAF--IKDKEGFWRRGGFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRK
        ++ G K+     P G++  F  I D+ G     GF G+P+TW K   N  SI E LDR       F      +V H++   SDHK + +E S++   KRK
Subjt:  IEDGPKM-DENNPKGRIDAF--IKDKEGFWRRGGFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRK

Query:  RYRKRPYHFEESWVKFDESVSIIKESWSINGQTSTTN-ISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLR--------GRDTEVIGLE
        R     + FEE W+        ++  W +N +    N +  K++   K LT+W+        K+   + KK++E K R L+R        G    ++ L+
Subjt:  RYRKRPYHFEESWVKFDESVSIIKESWSINGQTSTTN-ISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLR--------GRDTEVIGLE

Query:  KELDVLLEEEEMYWKMRSR
        KE++ L+++EE  W+ RSR
Subjt:  KELDVLLEEEEMYWKMRSR

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]1.2e-1234.43Show/hide
Query:  FLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIK-VRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRP-YHFEESWVKFDESVSIIKESWSINGQ
        F G  FTW K+  N + I+ERLD +  +   + +   I  + HL+  +SDH+ +++ M        K  RKRP + FE  W K  E  SIIK+SWS +  
Subjt:  FLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIK-VRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRP-YHFEESWVKFDESVSIIKESWSINGQ

Query:  TSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHL-----LRGRDTEVIGLEKELDVLLEEEEMYWKMRSR
        +S   I++ IQ    NL+ W++++       ++  K KE  D++  L     L     E+  LE++L+ LL +EE+YWK RSR
Subjt:  TSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHL-----LRGRDTEVIGLEKELDVLLEEEEMYWKMRSR

TrEMBL top hitse value%identityAlignment
A0A2N9EEA9 CCHC-type domain-containing protein4.3e-1330.73Show/hide
Query:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESWSINGQT
        GF G+PFTW K  K  +   ERLDR     +        KV HL  + SDH P++LE     Q+  +  R R + FE  WVK ++S  +++++WS++   
Subjt:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESWSINGQT

Query:  STT--NISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWKMRSR
         +    +  K++    +L  W+K R    +   I  K+K +++           E++ L+ E++ LLE+EE++W+ RSR
Subjt:  STT--NISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWKMRSR

A0A2N9ERX7 CCHC-type domain-containing protein2.9e-1733.52Show/hide
Query:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESWS--ING
        GF+GNPFTW+K  +    I ERLDR              KV HL  + SDH P+LLE   + Q   K  +KR +HF+  W+K D+  S+I ++W   I+ 
Subjt:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESWS--ING

Query:  QTSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWKMRSR
         +    +  K++   ++L  W+K R   ++   I  K+K+++        G   +++ L+ EL+ LLE+EE++W  RSR
Subjt:  QTSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWKMRSR

A0A2N9HND5 CCHC-type domain-containing protein4.3e-1330.73Show/hide
Query:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESWSINGQT
        GF G+PFTW K  K  +   ERLDR     +        KV HL  + SDH P++LE     Q+  +  R R + FE  WVK ++S  +++++WS++   
Subjt:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESWSINGQT

Query:  STT--NISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWKMRSR
         +    +  K++    +L  W+K R    +   I  K+K +++           E++ L+ E++ LLE+EE++W+ RSR
Subjt:  STT--NISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWKMRSR

A0A6J1DRA0 uncharacterized protein LOC1110224231.1e-1935.06Show/hide
Query:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIK-RKRYRKRPYHFEESWVKFDESVSIIKESWSINGQ
        GF+G+ FTW    K R  I ERLDRF    + F+   ++++RHL  + SDH+PIL E   V +    +R  +RP+ FEE W  F E   I++  W++ G 
Subjt:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVAQIK-RKRYRKRPYHFEESWVKFDESVSIIKESWSINGQ

Query:  TSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWK
           T    KI   ++ L +WN  R   +++ AI  K+ EI+  ++    G    +   +++L+ LLEEEE YW+
Subjt:  TSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEKELDVLLEEEEMYWK

A0A803MKN4 Uncharacterized protein9.6e-1333.33Show/hide
Query:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVA-QIKRKRYRKRPYHFEESWVKFDESVSIIKESWSINGQ
        GF+G+PFTW  +     +I+ERLDRF    +         V HL+   SDH PILL +       K+K+ +KR Y FEE W++ +    I+ E+W   G 
Subjt:  GFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYSDHKPILLEMSNVA-QIKRKRYRKRPYHFEESWVKFDESVSIIKESWSINGQ

Query:  TSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRG--RDTEVI----GLEKELDVLLEEEEMYWKMRSRED
            ++ +KI      L+ W++ +    +KE +++ K +++     +L G  + TEV+     L+  +D L   EEMYWK RSR+D
Subjt:  TSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRG--RDTEVI----GLEKELDVLLEEEEMYWKMRSRED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGGCAGATGAAAGAGAGAAAGCTGGAAAATCAGAGGACAAAGACCATTGGAATAAATGCAATTCAGTAGAGAGTGGGCCAATGACTATTGAGGATGGGCCAAA
GATGGATGAAAATAATCCAAAAGGACGCATTGACGCCTTTATTAAAGATAAGGAAGGTTTTTGGAGACGCGGGGGTTTCTTGGGGAATCCGTTTACATGGTACAAAAGCC
CAAAGAATAGATCATCTATAAGGGAAAGATTGGATAGATTTTTCTACATAGCATCAAACTTCAGGGACAACAACAGTATAAAAGTCAGACATCTAAACCTCATTTACTCT
GATCACAAACCTATCCTTCTAGAGATGTCCAATGTGGCTCAAATCAAAAGAAAGAGGTATAGGAAAAGGCCTTATCACTTTGAGGAAAGTTGGGTCAAGTTTGATGAAAG
TGTCAGCATTATTAAGGAGTCTTGGAGCATAAATGGGCAGACTTCAACGACTAACATCAGCACCAAAATTCAAGAATATATGAAGAATCTGACTGAATGGAACAAATTGA
GGTCGAAGTGGACTATTAAAGAAGCTATTGACTCAAAGAAGAAGGAAATTGAAGACAAACTGAGGCACTTATTAAGGGGAAGAGACACTGAGGTGATCGGACTGGAGAAA
GAGCTTGATGTTTTACTGGAAGAAGAGGAGATGTATTGGAAAATGAGATCGAGAGAAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGGCAGATGAAAGAGAGAAAGCTGGAAAATCAGAGGACAAAGACCATTGGAATAAATGCAATTCAGTAGAGAGTGGGCCAATGACTATTGAGGATGGGCCAAA
GATGGATGAAAATAATCCAAAAGGACGCATTGACGCCTTTATTAAAGATAAGGAAGGTTTTTGGAGACGCGGGGGTTTCTTGGGGAATCCGTTTACATGGTACAAAAGCC
CAAAGAATAGATCATCTATAAGGGAAAGATTGGATAGATTTTTCTACATAGCATCAAACTTCAGGGACAACAACAGTATAAAAGTCAGACATCTAAACCTCATTTACTCT
GATCACAAACCTATCCTTCTAGAGATGTCCAATGTGGCTCAAATCAAAAGAAAGAGGTATAGGAAAAGGCCTTATCACTTTGAGGAAAGTTGGGTCAAGTTTGATGAAAG
TGTCAGCATTATTAAGGAGTCTTGGAGCATAAATGGGCAGACTTCAACGACTAACATCAGCACCAAAATTCAAGAATATATGAAGAATCTGACTGAATGGAACAAATTGA
GGTCGAAGTGGACTATTAAAGAAGCTATTGACTCAAAGAAGAAGGAAATTGAAGACAAACTGAGGCACTTATTAAGGGGAAGAGACACTGAGGTGATCGGACTGGAGAAA
GAGCTTGATGTTTTACTGGAAGAAGAGGAGATGTATTGGAAAATGAGATCGAGAGAAGACTAG
Protein sequenceShow/hide protein sequence
MEKADEREKAGKSEDKDHWNKCNSVESGPMTIEDGPKMDENNPKGRIDAFIKDKEGFWRRGGFLGNPFTWYKSPKNRSSIRERLDRFFYIASNFRDNNSIKVRHLNLIYS
DHKPILLEMSNVAQIKRKRYRKRPYHFEESWVKFDESVSIIKESWSINGQTSTTNISTKIQEYMKNLTEWNKLRSKWTIKEAIDSKKKEIEDKLRHLLRGRDTEVIGLEK
ELDVLLEEEEMYWKMRSRED