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Lag0038199 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038199
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCoat protein
Genome locationchr2:13639193..13639726
RNA-Seq ExpressionLag0038199
SyntenyLag0038199
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2390763.1 uncharacterized protein HKW66_Vig0252990 [Vigna angularis]1.5e-1247.25Show/hide
Query:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFG
        +  A Y ++VP L   LGIP KS+D GVK+GSAWWT +  V+ G+ DL   LPRSHYSD  A LR +F+  +E    + IV+   T   FG
Subjt:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFG

QED42870.1 ORF1 [Camellia cryptic virus 1]1.1e-1245.05Show/hide
Query:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE
        Y + +PIL++  GIP K++DT VKSGSAWWT R + VN T D + ILP  HYS+  A+L +MF++  + G++  I+  +  DV +G  +RE
Subjt:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE

QPL17793.1 coat protein [Pistacia cryptic virus]1.5e-1240.66Show/hide
Query:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE
        Y +++P+LK  LGIP KS+DT +KSGSAWWT RP++V+G  D + I P S+YS+   VL ++F+  ++  +   ++A +  D  +   +RE
Subjt:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE

QPL17799.1 coat protein [Pistacia cryptic virus]5.9e-1443.96Show/hide
Query:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE
        Y +++P+LK  LGIP KS+DT +KSGSAWWT RP++V+G  D + I P S+YS+  AVL ++F+  N++ +   ++A +  DV +   +RE
Subjt:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE

YP_001686788.1 putative coat protein [Rose cryptic virus 1]2.3e-1337.4Show/hide
Query:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGD-VDGIVAPRDTDVGFGYTVREAAL
        F++  Y +++P  KD LGIPCKS+D  +KSGSAWWT +    +GT DL   +P ++YSD G  LR++F+    + D    I+A  +    FG  +RE   
Subjt:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGD-VDGIVAPRDTDVGFGYTVREAAL

Query:  NIGVQDVSRTLSRTKGRVEPRSN
        N    ++   L+   G +E  SN
Subjt:  NIGVQDVSRTLSRTKGRVEPRSN

TrEMBL top hitse value%identityAlignment
A0A0L9UU87 Uncharacterized protein7.1e-1347.25Show/hide
Query:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFG
        +  A Y ++VP L   LGIP KS+D GVK+GSAWWT +  V+ G+ DL   LPRSHYSD  A LR +F+  +E    + IV+   T   FG
Subjt:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFG

A0A7G3W8P5 ORF15.4e-1345.05Show/hide
Query:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE
        Y + +PIL++  GIP K++DT VKSGSAWWT R + VN T D + ILP  HYS+  A+L +MF++  + G++  I+  +  DV +G  +RE
Subjt:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE

A0A7T0M821 Coat protein2.9e-1443.96Show/hide
Query:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE
        Y +++P+LK  LGIP KS+DT +KSGSAWWT RP++V+G  D + I P S+YS+  AVL ++F+  N++ +   ++A +  DV +   +RE
Subjt:  YSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVRE

B1A0S7 Putative coat protein1.1e-1337.4Show/hide
Query:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGD-VDGIVAPRDTDVGFGYTVREAAL
        F++  Y +++P  KD LGIPCKS+D  +KSGSAWWT +    +GT DL   +P ++YSD G  LR++F+    + D    I+A  +    FG  +RE   
Subjt:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGD-VDGIVAPRDTDVGFGYTVREAAL

Query:  NIGVQDVSRTLSRTKGRVEPRSN
        N    ++   L+   G +E  SN
Subjt:  NIGVQDVSRTLSRTKGRVEPRSN

B1NQH3 Uncharacterized protein1.1e-1337.4Show/hide
Query:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGD-VDGIVAPRDTDVGFGYTVREAAL
        F++  Y +++P  KD LGIPCKS+D  +KSGSAWWT +    +GT DL   +P ++YSD G  LR++F+    + D    I+A  +    FG  +RE   
Subjt:  FDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGD-VDGIVAPRDTDVGFGYTVREAAL

Query:  NIGVQDVSRTLSRTKGRVEPRSN
        N    ++   L+   G +E  SN
Subjt:  NIGVQDVSRTLSRTKGRVEPRSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTTGATCTGGCAGGATACTCGTCGTTTGTTCCGATTTTGAAGGATTATTTGGGCATACCCTGCAAATCGATCGACACTGGAGTGAAGAGTGGATCCGCATGGTG
GACGTTGAGGCCCAGAGTTGTGAATGGCACTGTTGATTTACAACGTATTCTACCGCGTTCACATTATTCTGACTTTGGCGCTGTTCTTCGCACAATGTTTGTGAATCCAA
ATGAAGAAGGGGATGTTGATGGGATCGTTGCACCACGCGACACCGACGTTGGTTTTGGATATACTGTCAGAGAAGCAGCGTTAAACATTGGCGTTCAGGACGTTTCTCGC
ACTTTGTCACGGACCAAAGGAAGAGTGGAGCCACGGAGCAATATAGATATAGCCTTGCACTCAACTTGTTTTAATTTCATTAAGCTTGAAGGTGTTTCTTTTATCTTATT
GATTTTTGTTTTGTTGGATCATACGTTGGACATTCAAACCACAGATCTGTTAGTCGTTAGCTCGTGGACTCTTTTAACTTATTTTAGTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTTGATCTGGCAGGATACTCGTCGTTTGTTCCGATTTTGAAGGATTATTTGGGCATACCCTGCAAATCGATCGACACTGGAGTGAAGAGTGGATCCGCATGGTG
GACGTTGAGGCCCAGAGTTGTGAATGGCACTGTTGATTTACAACGTATTCTACCGCGTTCACATTATTCTGACTTTGGCGCTGTTCTTCGCACAATGTTTGTGAATCCAA
ATGAAGAAGGGGATGTTGATGGGATCGTTGCACCACGCGACACCGACGTTGGTTTTGGATATACTGTCAGAGAAGCAGCGTTAAACATTGGCGTTCAGGACGTTTCTCGC
ACTTTGTCACGGACCAAAGGAAGAGTGGAGCCACGGAGCAATATAGATATAGCCTTGCACTCAACTTGTTTTAATTTCATTAAGCTTGAAGGTGTTTCTTTTATCTTATT
GATTTTTGTTTTGTTGGATCATACGTTGGACATTCAAACCACAGATCTGTTAGTCGTTAGCTCGTGGACTCTTTTAACTTATTTTAGTTTCTAG
Protein sequenceShow/hide protein sequence
MQFDLAGYSSFVPILKDYLGIPCKSIDTGVKSGSAWWTLRPRVVNGTVDLQRILPRSHYSDFGAVLRTMFVNPNEEGDVDGIVAPRDTDVGFGYTVREAALNIGVQDVSR
TLSRTKGRVEPRSNIDIALHSTCFNFIKLEGVSFILLIFVLLDHTLDIQTTDLLVVSSWTLLTYFSF