| GenBank top hits | e value | %identity | Alignment |
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| KAA3469681.1 reverse transcriptase [Gossypium australe] | 5.5e-47 | 54.75 | Show/hide |
Query: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
D I I ITEE NA+L FT EEI+ + +M PTKA G DG+ A+FYQK W I+G DV YCLQ LNN + IN T IVLI KV P ++ F
Subjt: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
Query: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
PISLC V+YK+IAK++ANR+ V+ K I P+QS FV GRLI+DN ++ +E +H++KN++ GK G++A+KLDMSKAYDRV
Subjt: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| KAA3480199.1 reverse transcriptase [Gossypium australe] | 7.2e-47 | 53.63 | Show/hide |
Query: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
D I I ++EE NA+L FT+EEI+ + +M PTKA G DG+ A+FYQK W I+G DV YCLQ LNN + IN T IVLI KV P ++ F
Subjt: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
Query: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
PISLC V+YK+IAK++ANR++ V+ K I P+QS FV GRLI+DN ++ +E +H++KN++ GK G++A+KLDMSKAYDRV
Subjt: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| OMO59710.1 reverse transcriptase [Corchorus capsularis] | 1.9e-47 | 55.31 | Show/hide |
Query: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
D ILE + +IT E N L FT EEI+ +K++HPTKA GPDG+ F++K+W IVG+DV S+CL F + L N T+IVLI KV +P ++ F
Subjt: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
Query: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
PISLC VLYK+I+K+L NR+KS+L IS SQS FV GRLI+DN ++ FE +HS+K+R+ GK G ALKLDMSKAYDRV
Subjt: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| XP_012461392.1 PREDICTED: uncharacterized protein LOC105781396 [Gossypium raimondii] | 1.1e-47 | 56.42 | Show/hide |
Query: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
DHIL I R I + N +LT +++EEI + +M PTKA G DG A+FYQK W IVG+DV S+CLQ LN + PIN T IVLI KV P +M F
Subjt: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
Query: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
PISLC VLYK+IAK+LANR +SV+ K I +QS FV GRLISDN ++ +E +H +K +R GK G +A+KLDMSKAYDRV
Subjt: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber] | 2.0e-49 | 54.24 | Show/hide |
Query: ILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFWPI
+L+ IP T+TEE N L + FT+EEI + +MHPTKA GPDG+ A+F+QKYW+IVGND+ L LN+ + IN T I L+ K+K P M DF PI
Subjt: ILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFWPI
Query: SLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
SLC V+YK+I+K+LANR+K++L +IIS +QS F+SGRLI+DN ++ FE +H +++++ GK G A+KLDMSKAYDRV
Subjt: SLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A1R3GNW3 Reverse transcriptase | 9.2e-48 | 55.31 | Show/hide |
Query: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
D ILE + +IT E N L FT EEI+ +K++HPTKA GPDG+ F++K+W IVG+DV S+CL F + L N T+IVLI KV +P ++ F
Subjt: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
Query: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
PISLC VLYK+I+K+L NR+KS+L IS SQS FV GRLI+DN ++ FE +HS+K+R+ GK G ALKLDMSKAYDRV
Subjt: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| A0A2N9E9A1 Reverse transcriptase domain-containing protein | 7.1e-48 | 54.75 | Show/hide |
Query: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
+ ++E IPR +T E N LT+ F E+ +K+M P K+ GPDG +FYQKYW I+G DV L LN+ K L IN+T+I LI KVK P S+ DF
Subjt: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
Query: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
PISLC V+YK+I+K+L NR+KS+L +I+S SQS FV GRLI+DN ++ FE +H + +RRGK G VALKLDMSKAYDRV
Subjt: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| A0A5B6V0I7 Reverse transcriptase | 7.8e-47 | 53.59 | Show/hide |
Query: DNDHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKD
+ D IL I +TEE N L SFTKEEI+ + +M PTKA G DG++A+FYQK W I+G +V +YCL LNN L IN T IVL+ KV P ++
Subjt: DNDHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKD
Query: FWPISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
F PISLC V+YKVIAK LANR+++++ K I SQS FV GRLISDN ++ +E +H+++N++ GK G++A+KLDMSKA+DRV
Subjt: FWPISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| A0A5B6VKR7 Reverse transcriptase | 2.7e-47 | 54.75 | Show/hide |
Query: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
D I I ITEE NA+L FT EEI+ + +M PTKA G DG+ A+FYQK W I+G DV YCLQ LNN + IN T IVLI KV P ++ F
Subjt: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
Query: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
PISLC V+YK+IAK++ANR+ V+ K I P+QS FV GRLI+DN ++ +E +H++KN++ GK G++A+KLDMSKAYDRV
Subjt: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| A0A5B6WEP5 Reverse transcriptase | 3.5e-47 | 53.63 | Show/hide |
Query: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
D I I ++EE NA+L FT+EEI+ + +M PTKA G DG+ A+FYQK W I+G DV YCLQ LNN + IN T IVLI KV P ++ F
Subjt: DHILETIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFW
Query: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
PISLC V+YK+IAK++ANR++ V+ K I P+QS FV GRLI+DN ++ +E +H++KN++ GK G++A+KLDMSKAYDRV
Subjt: PISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| SwissProt top hits | e value | %identity | Alignment |
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| O00370 LINE-1 retrotransposable element ORF2 protein | 7.8e-12 | 29.47 | Show/hide |
Query: MEDNDHILE--TIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTY----IVLILKV
+E+ D L+ T+PR + +E+ L R T EI +I + K+ GPDG A FYQ+Y + ++ + L+ + ++ + N++ I+LI K
Subjt: MEDNDHILE--TIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTY----IVLILKV
Query: -KEPISMKDFWPISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
++ ++F PISL + K++ KILANR++ + K+I Q F+ G N I + NR + K V+ + +D KA+D++
Subjt: -KEPISMKDFWPISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| P08548 LINE-1 reverse transcriptase homolog | 1.1e-08 | 27.89 | Show/hide |
Query: MEDNDHILET--IPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTY----IVLILKV
+++ D LE +PR +++++ L R + EI I+ + K+ GPDG + FYQ + + ++ L N ++ + NT+ I LI K
Subjt: MEDNDHILET--IPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTY----IVLILKV
Query: -KEPISMKDFWPISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
K+P +++ PISL + K++ KIL NR++ + KII Q F+ G N I + N+ + K ++ L +D KA+D +
Subjt: -KEPISMKDFWPISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| P11369 LINE-1 retrotransposable element ORF2 protein | 9.6e-10 | 28.42 | Show/hide |
Query: MEDNDHILE--TIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTY----IVLILK-
+++ D L+ +P+ + ++Q L + +EI VI + K+ GPDG A FYQ + + D+ + + + + N++ I LI K
Subjt: MEDNDHILE--TIPRTITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTY----IVLILK-
Query: VKEPISMKDFWPISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
K+P +++F PISL + K++ KILANR++ + II P Q F+ G N IH + N+ + K ++ + LD KA+D++
Subjt: VKEPISMKDFWPISLCLVLYKVIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 2.9e-14 | 30.18 | Show/hide |
Query: ITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFWPISLCLVLYK
++E + L T +E+ ++ M K+ G DG+ F+Q +WD +G D + + + L+ K + +K++ P+SL YK
Subjt: ITEEQNAELTRSFTKEEIYGVIKKMHPTKAHGPDGIQAVFYQKYWDIVGNDVCSYCLQFLNNEKRLDPINNTYIVLILKVKEPISMKDFWPISLCLVLYK
Query: VIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
++AK ++ R+KSVL ++I P QS V GR I DN + + +H RR + L LD KA+DRV
Subjt: VIAKILANRMKSVLDKIISPSQSTFVSGRLISDNTIIGFECIHSVKNRRRGKGGVVALKLDMSKAYDRV
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