; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038208 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038208
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:13804651..13805304
RNA-Seq ExpressionLag0038208
SyntenyLag0038208
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]3.7e-5054.27Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEIT------------------------TTETG-
        MGF +RW  L+M CVESVRF VL+NGVP  EFTPNRGLRQ DPLS YLF++ AEGLS L+N  E+   IT                           TG 
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEIT------------------------TTETG-

Query:  CRSIQRILHIYEKASR-QTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILI
        CRSI+ IL  YEKAS  Q +N +K  F+VS NT    +  IR  L V+H ES GQYLGLPSQ  +NKR++F+NIKDRVW  LQGWKGK FS  GRE+L+
Subjt:  CRSIQRILHIYEKASR-QTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILI

XP_022841874.1 uncharacterized protein LOC111365549 [Olea europaea var. sylvestris]1.2e-4844.21Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEIT-------------------------TTETG
        +GF D+   LVM CV +  F +L+NG P    TP+RGLRQ DP+S YLFLI  EGL  LLN  ERNK +T                           E+ 
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEIT-------------------------TTETG

Query:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS
           +Q +L  YE AS Q +N +K + + S N S  +  +I        ++ + +YLGLP    ++K   F +IK +VW  LQGWK   FS  GREIL+KS
Subjt:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS

Query:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH
        VA AI +YAMSCFK P TLC EL    ARFWWG  KE RKIH
Subjt:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH

XP_023889222.1 LOW QUALITY PROTEIN: uncharacterized protein LOC112001275 [Quercus suber]1.2e-4842.15Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG
        MGF D+W +L+M C+ +V + +++NG P S   P+RG+RQ DPLS YLFL+  EGL  LL+       I                           +   
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG

Query:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS
        C+ +Q +L  YEKAS Q +N  K +   S  T    +N I+ +L V  ++   +YLGLP+   KNK+E F  IK+RVW  LQGWK +  S AGRE+L+K+
Subjt:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS

Query:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH
        V QAI  YAMSCFK P+TLCNE+     +FWWG   E RKIH
Subjt:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH

XP_023923071.1 uncharacterized protein LOC112034488 [Quercus suber]3.1e-4944.03Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI--------------------------TTTET
        MGF D W  L+M C+ S  + VL+NG P  + TP RGLRQ DPLS YLFL+  EG  GLL   E   +I                          + TE 
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI--------------------------TTTET

Query:  GCRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIK
         C  +  IL IYE+AS Q +N +K     S +T+ G  + I+++L V  ++ + +YLGLPS   + K+E FDNIK +VW  LQGW+GK  S AGREILIK
Subjt:  GCRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIK

Query:  SVAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH
        +VAQA+  Y MSCFK P  LC+++     RF+WG   EGRK+H
Subjt:  SVAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH

XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata]3.1e-4945.04Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEIT-------------------------TTETG
        MGF   W   VM CV +  F +L+NG P     P+RG+RQ DP+S YLFL+ AEGL+ LLN  E N  IT                          T   
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEIT-------------------------TTETG

Query:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS
          +I  IL IYE+AS Q++N EK +   S NTS G+   I + L V  ++ F +YLGLP+   + K   F  +KDRVW  LQGWKG   S AG+EILIK+
Subjt:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS

Query:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH
        VAQAI  Y MS F+ P+ LC+EL   CARFWWG     RKIH
Subjt:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH

TrEMBL top hitse value%identityAlignment
A0A2N9EK17 Reverse transcriptase domain-containing protein9.2e-5549.77Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEITTTETGCRSIQRILHIYEKASRQTVNFEKLN
        MGF  RW +L+M C+ +V + VL+NG P     P+RGLRQ DPLS YLFLI AEGLS L    ER + +   ++   +++ ILH YE AS Q +NFEK  
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEITTTETGCRSIQRILHIYEKASRQTVNFEKLN

Query:  FMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKSVAQAILNYAMSCFKFPVTLCNELNC
        F  S NT       I   L      +FG+YLGLP    + KR+ F+  K R+W  LQGWKGK  S AGRE+LIK+VA AI  YAMSCFK P TLC+E+  
Subjt:  FMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKSVAQAILNYAMSCFKFPVTLCNELNC

Query:  FCARFWWGSSKEGRKIH
          +RFWWG   + RKIH
Subjt:  FCARFWWGSSKEGRKIH

A0A2N9GB96 Uncharacterized protein3.3e-5245.04Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG
        MGF  +W SL+M C+ +V + +L+NG PR   TP+RGLRQ DP+S YLFL+ AEGL+GLLN      EI                           T+  
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG

Query:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS
        C  IQ +L+IYEKAS Q +N  K     S NTS    + I++ L V  I  + +YLGLPS   K K   F  IKDRVW+ ++GWK K  S AGREILIK+
Subjt:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS

Query:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH
        V QAI  Y M+CFK PV LC ++     RFWWG   + RK+H
Subjt:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH

A0A2N9GLG8 Reverse transcriptase domain-containing protein3.3e-5245.04Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG
        MGF  +W SL+M C+ +V + +L+NG PR   TP+RGLRQ DP+S YLFL+ AEGL+GLLN      EI                           T+  
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG

Query:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS
        C  IQ +L+IYEKAS Q +N  K     S NTS    + I++ L V  I  + +YLGLPS   K K   F  IKDRVW+ ++GWK K  S AGREILIK+
Subjt:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS

Query:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH
        V QAI  Y M+CFK PV LC ++     RFWWG   + RK+H
Subjt:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH

A0A2N9GYM1 Reverse transcriptase domain-containing protein3.3e-5245.04Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG
        MGF  +W SL+M C+ +V + +L+NG PR   TP+RGLRQ DP+S YLFL+ AEGL+GLLN      EI                           T+  
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG

Query:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS
        C  IQ +L+IYEKAS Q +N  K     S NTS    + I++ L V  I  + +YLGLPS   K K   F  IKDRVW+ ++GWK K  S AGREILIK+
Subjt:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS

Query:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH
        V QAI  Y M+CFK PV LC ++     RFWWG   + RK+H
Subjt:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH

A0A2N9H0J9 Uncharacterized protein3.3e-5245.04Show/hide
Query:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG
        MGF  +W SL+M C+ +V + +L+NG PR   TP+RGLRQ DP+S YLFL+ AEGL+GLLN      EI                           T+  
Subjt:  MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEI-------------------------TTTETG

Query:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS
        C  IQ +L+IYEKAS Q +N  K     S NTS    + I++ L V  I  + +YLGLPS   K K   F  IKDRVW+ ++GWK K  S AGREILIK+
Subjt:  CRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIGRINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKS

Query:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH
        V QAI  Y M+CFK PV LC ++     RFWWG   + RK+H
Subjt:  VAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.2e-0631.76Show/hide
Query:  LPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKSVAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH
        +P    +  ++ F  I +RV + + GW+ K  S AGR  L K+V  ++  ++MS    P ++ N L+     F WGS+ E +K H
Subjt:  LPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKSVAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH

P92555 Uncharacterized mitochondrial protein AtMg012502.2e-0559.46Show/hide
Query:  LLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGL
        ++NG P+   TP+RGLRQ DPLS YLF++  E LSGL
Subjt:  LLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGL

Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)1.6e-0659.46Show/hide
Query:  LLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGL
        ++NG P+   TP+RGLRQ DPLS YLF++  E LSGL
Subjt:  LLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTGTGACAGATGGACAAGTTTAGTTATGGGATGCGTTGAATCGGTGAGATTCCAAGTTCTCCTTAATGGAGTTCCTCGTTCAGAGTTTACTCCAAACCGTGG
TCTAAGACAAAGAGATCCTCTCTCTTCTTATTTATTCTTGATCTATGCAGAAGGTTTATCGGGACTTCTCAACCACTATGAGAGGAATAAGGAGATCACAACTACTGAAA
CAGGTTGCAGGTCCATCCAAAGAATCCTCCATATATACGAAAAAGCATCGAGACAAACTGTTAACTTTGAGAAATTAAACTTTATGGTTAGTCCCAACACAAGCATTGGG
CGTATCAACACTATTAGGGACACCCTAAAGGTTCATCACATAGAGAGTTTTGGGCAATATCTTGGTTTACCATCTCAAAATGCGAAGAACAAACGAGAAATTTTTGACAA
TATTAAAGATCGAGTGTGGAATACACTTCAAGGGTGGAAAGGGAAGTTTTTCTCAACCGCGGGCAGAGAAATCCTCATTAAATCTGTAGCTCAAGCAATTCTAAACTACG
CCATGAGCTGTTTCAAATTTCCTGTAACCTTGTGTAACGAGCTTAACTGTTTTTGTGCAAGGTTTTGGTGGGGATCATCGAAGGAAGGAAGGAAGATTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTGTGACAGATGGACAAGTTTAGTTATGGGATGCGTTGAATCGGTGAGATTCCAAGTTCTCCTTAATGGAGTTCCTCGTTCAGAGTTTACTCCAAACCGTGG
TCTAAGACAAAGAGATCCTCTCTCTTCTTATTTATTCTTGATCTATGCAGAAGGTTTATCGGGACTTCTCAACCACTATGAGAGGAATAAGGAGATCACAACTACTGAAA
CAGGTTGCAGGTCCATCCAAAGAATCCTCCATATATACGAAAAAGCATCGAGACAAACTGTTAACTTTGAGAAATTAAACTTTATGGTTAGTCCCAACACAAGCATTGGG
CGTATCAACACTATTAGGGACACCCTAAAGGTTCATCACATAGAGAGTTTTGGGCAATATCTTGGTTTACCATCTCAAAATGCGAAGAACAAACGAGAAATTTTTGACAA
TATTAAAGATCGAGTGTGGAATACACTTCAAGGGTGGAAAGGGAAGTTTTTCTCAACCGCGGGCAGAGAAATCCTCATTAAATCTGTAGCTCAAGCAATTCTAAACTACG
CCATGAGCTGTTTCAAATTTCCTGTAACCTTGTGTAACGAGCTTAACTGTTTTTGTGCAAGGTTTTGGTGGGGATCATCGAAGGAAGGAAGGAAGATTCATTGA
Protein sequenceShow/hide protein sequence
MGFCDRWTSLVMGCVESVRFQVLLNGVPRSEFTPNRGLRQRDPLSSYLFLIYAEGLSGLLNHYERNKEITTTETGCRSIQRILHIYEKASRQTVNFEKLNFMVSPNTSIG
RINTIRDTLKVHHIESFGQYLGLPSQNAKNKREIFDNIKDRVWNTLQGWKGKFFSTAGREILIKSVAQAILNYAMSCFKFPVTLCNELNCFCARFWWGSSKEGRKIH