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Lag0038211 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038211
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGirdin-like
Genome locationchr2:13840057..13840629
RNA-Seq ExpressionLag0038211
SyntenyLag0038211
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.7e-0934.15Show/hide
Query:  VLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLN-----------------------------------YFPLVG-PWGCVHYALLLALRQRWF
        +++PR+KGYV+++V+K+F  IE+GVNP IP++ ET R+LN                                   Y+P +    G + Y+ LL LRQ W 
Subjt:  VLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLN-----------------------------------YFPLVG-PWGCVHYALLLALRQRWF

Query:  KQFILATHGLNKLEFSYNCEDSN
        KQF     GL   EFSY    +N
Subjt:  KQFILATHGLNKLEFSYNCEDSN

MBA0560740.1 hypothetical protein [Gossypium lobatum]2.3e-0941.46Show/hide
Query:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYFPLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSY
        MV++P+   ++DD V  LF  +++ V P + +++ET R+L+  PL+G WG + YA  L LRQ   +QFILAT G  + +F+Y
Subjt:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYFPLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSY

MBA0671114.1 hypothetical protein [Gossypium klotzschianum]3.0e-0941.18Show/hide
Query:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLN--------------------YFPLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEF
        +V++PR  G+VD+ V  LF  + +GV P   +L ET R+LN                    + PL+G WG V YA LL LRQ   +QF+LAT GL   EF
Subjt:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLN--------------------YFPLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEF

Query:  SY
        SY
Subjt:  SY

MBA0819544.1 hypothetical protein [Gossypium harknessii]1.3e-0943.02Show/hide
Query:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYF----PLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSY
        +V+ P+V G++DD VL+LF   ++ V P +  L+ET R+L+ +    PL+G WG + Y LLL LRQ   + FI AT  L + EF+Y
Subjt:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYF----PLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSY

TYK07552.1 girdin-like [Cucumis melo var. makuwa]1.7e-0927.72Show/hide
Query:  VLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYF----------------------------------------------------------
        V++P+ +GYVD  V+KLFF +E+GVNP IP+L +T R+LNY+                                                          
Subjt:  VLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYF----------------------------------------------------------

Query:  -----------------------------------------PLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSYNCED
                                                 PL+GPWG V+Y  LL LRQ W KQFI  TH L + +FSYN ED
Subjt:  -----------------------------------------PLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSYNCED

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like8.4e-1034.15Show/hide
Query:  VLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLN-----------------------------------YFPLVG-PWGCVHYALLLALRQRWF
        +++PR+KGYV+++V+K+F  IE+GVNP IP++ ET R+LN                                   Y+P +    G + Y+ LL LRQ W 
Subjt:  VLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLN-----------------------------------YFPLVG-PWGCVHYALLLALRQRWF

Query:  KQFILATHGLNKLEFSYNCEDSN
        KQF     GL   EFSY    +N
Subjt:  KQFILATHGLNKLEFSYNCEDSN

A0A5D3C8D9 Girdin-like8.4e-1027.72Show/hide
Query:  VLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYF----------------------------------------------------------
        V++P+ +GYVD  V+KLFF +E+GVNP IP+L +T R+LNY+                                                          
Subjt:  VLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYF----------------------------------------------------------

Query:  -----------------------------------------PLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSYNCED
                                                 PL+GPWG V+Y  LL LRQ W KQFI  TH L + +FSYN ED
Subjt:  -----------------------------------------PLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSYNCED

A0A7J8M7Z0 Uncharacterized protein1.1e-0941.46Show/hide
Query:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYFPLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSY
        MV++P+   ++DD V  LF  +++ V P + +++ET R+L+  PL+G WG + YA  L LRQ   +QFILAT G  + +F+Y
Subjt:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYFPLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSY

A0A7J8W8Y2 Uncharacterized protein1.4e-0941.18Show/hide
Query:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLN--------------------YFPLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEF
        +V++PR  G+VD+ V  LF  + +GV P   +L ET R+LN                    + PL+G WG V YA LL LRQ   +QF+LAT GL   EF
Subjt:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLN--------------------YFPLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEF

Query:  SY
        SY
Subjt:  SY

A0A7J9ID51 Uncharacterized protein6.4e-1043.02Show/hide
Query:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYF----PLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSY
        +V+ P+V G++DD VL+LF   ++ V P +  L+ET R+L+ +    PL+G WG + Y LLL LRQ   + FI AT  L + EF+Y
Subjt:  MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYF----PLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTGTATCCCAGAGTAAAAGGGTATGTGGATGACGATGTCTTGAAGCTCTTCTTCTGCATTGAGCAAGGGGTGAATCCAACCATACCTCTTCTGATAGAAACAAT
TCGGACGCTCAATTATTTTCCTCTGGTAGGTCCTTGGGGGTGTGTCCATTATGCTCTGTTGTTGGCCTTACGACAAAGATGGTTTAAGCAATTCATACTAGCAACTCATG
GTCTGAATAAACTAGAATTTTCCTACAACTGCGAGGATTCTAATGAATGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTGTATCCCAGAGTAAAAGGGTATGTGGATGACGATGTCTTGAAGCTCTTCTTCTGCATTGAGCAAGGGGTGAATCCAACCATACCTCTTCTGATAGAAACAAT
TCGGACGCTCAATTATTTTCCTCTGGTAGGTCCTTGGGGGTGTGTCCATTATGCTCTGTTGTTGGCCTTACGACAAAGATGGTTTAAGCAATTCATACTAGCAACTCATG
GTCTGAATAAACTAGAATTTTCCTACAACTGCGAGGATTCTAATGAATGGAAGTGA
Protein sequenceShow/hide protein sequence
MVLYPRVKGYVDDDVLKLFFCIEQGVNPTIPLLIETIRTLNYFPLVGPWGCVHYALLLALRQRWFKQFILATHGLNKLEFSYNCEDSNEWK